EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000009459 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 8133 bases
Position: chrPEQF01098806.1:25832-33964
Accession: 111655623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000011923	RRM_1	PF00076.22	1.4e-19	1	1
ENSSLDP00000011901	RRM_1	PF00076.22	1.6e-19	1	1
ENSSLDP00000011923	U1snRNP70_N	PF12220.8	4.2e-25	1	1
ENSSLDP00000011901	U1snRNP70_N	PF12220.8	4.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012337	-	1761	XM_023407100	ENSSLDP00000011901	490 (aa)	XP_023262868	UPI000C6F7896
ENSSLDT00000012358	-	1368	-	ENSSLDP00000011923	455 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000009459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009459	snrnp70	76	88.341	ENSAOCG00000011672	snrnp70	84	88.341	Amphiprion_ocellaris
ENSSLDG00000009459	snrnp70	59	45.455	WBGene00004390	rnp-7	57	51.579	Caenorhabditis_elegans
ENSSLDG00000009459	snrnp70	100	73.987	ENSMMOG00000005467	snrnp70	78	98.661	Mola_mola
ENSSLDG00000009459	snrnp70	73	98.673	ENSONIG00000007822	snrnp70	81	98.661	Oreochromis_niloticus
ENSSLDG00000009459	snrnp70	58	81.955	ENSPPAG00000035067	SNRNP70	99	89.024	Pan_paniscus
ENSSLDG00000009459	snrnp70	56	75.686	ENSPCOG00000023103	SNRNP70	79	83.408	Propithecus_coquereli
ENSSLDG00000009459	snrnp70	100	98.163	ENSSDUG00000017591	snrnp70	100	98.163	Seriola_dumerili
ENSSLDG00000009459	snrnp70	53	87.600	ENSSPUG00000016621	SNRNP70	52	93.243	Sphenodon_punctatus