EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009557 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4106 bases
Position: chrPEQF01099085.1:2443633-2447738
Accession: 111664848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012012	zf-C2H2	PF00096.26	1.2e-10	1	2
ENSSLDP00000012012	zf-C2H2	PF00096.26	1.2e-10	2	2
ENSSLDP00000012012	zf-met	PF12874.7	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012453	-	1986	XM_023419638	ENSSLDP00000012012	381 (aa)	XP_023275406	UPI000C6F6DA0

Gene Model

Click here to download ENSSLDG00000009557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009557	prdm12b	100	76.501	ENSSLDG00000013562	-	100	76.501
ENSSLDG00000009557	prdm12b	63	40.476	ENSSLDG00000006506	prdm14	50	40.476
ENSSLDG00000009557	prdm12b	70	41.176	ENSSLDG00000013353	prdm5	92	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009557	prdm12b	90	81.341	ENSG00000130711	PRDM12	99	75.065	Homo_sapiens
ENSSLDG00000009557	prdm12b	100	92.248	ENSAPOG00000016051	prdm12b	100	93.282	Acanthochromis_polyacanthus
ENSSLDG00000009557	prdm12b	100	66.929	ENSAPOG00000018234	-	100	67.454	Acanthochromis_polyacanthus
ENSSLDG00000009557	prdm12b	90	79.532	ENSAMEG00000016234	PRDM12	99	79.532	Ailuropoda_melanoleuca
ENSSLDG00000009557	prdm12b	100	77.778	ENSACIG00000005193	-	100	78.228	Amphilophus_citrinellus
ENSSLDG00000009557	prdm12b	100	92.388	ENSACIG00000019578	prdm12b	100	92.388	Amphilophus_citrinellus
ENSSLDG00000009557	prdm12b	100	91.146	ENSAOCG00000015040	prdm12b	100	91.927	Amphiprion_ocellaris
ENSSLDG00000009557	prdm12b	100	90.885	ENSAPEG00000015092	prdm12b	100	91.927	Amphiprion_percula
ENSSLDG00000009557	prdm12b	100	72.250	ENSAPEG00000022849	-	99	72.750	Amphiprion_percula
ENSSLDG00000009557	prdm12b	100	80.307	ENSATEG00000014595	-	100	80.818	Anabas_testudineus
ENSSLDG00000009557	prdm12b	94	78.771	ENSANAG00000020616	PRDM12	99	78.771	Aotus_nancymaae
ENSSLDG00000009557	prdm12b	100	74.877	ENSACLG00000007631	-	100	76.543	Astatotilapia_calliptera
ENSSLDG00000009557	prdm12b	100	87.402	ENSACLG00000011876	prdm12b	100	87.402	Astatotilapia_calliptera
ENSSLDG00000009557	prdm12b	100	81.095	ENSAMXG00000008540	PRDM12	100	81.343	Astyanax_mexicanus
ENSSLDG00000009557	prdm12b	100	81.984	ENSAMXG00000033665	prdm12b	100	82.597	Astyanax_mexicanus
ENSSLDG00000009557	prdm12b	90	82.216	ENSBTAG00000023797	PRDM12	99	76.378	Bos_taurus
ENSSLDG00000009557	prdm12b	90	81.341	ENSCJAG00000020540	PRDM12	99	75.844	Callithrix_jacchus
ENSSLDG00000009557	prdm12b	79	82.060	ENSCAFG00000023076	PRDM12	99	75.294	Canis_familiaris
ENSSLDG00000009557	prdm12b	90	81.924	ENSCAFG00020024046	PRDM12	99	75.916	Canis_lupus_dingo
ENSSLDG00000009557	prdm12b	90	81.924	ENSCHIG00000025005	PRDM12	99	75.584	Capra_hircus
ENSSLDG00000009557	prdm12b	87	80.665	ENSCPOG00000005901	PRDM12	95	80.665	Cavia_porcellus
ENSSLDG00000009557	prdm12b	90	81.341	ENSCCAG00000037485	PRDM12	99	75.328	Cebus_capucinus
ENSSLDG00000009557	prdm12b	90	81.341	ENSCATG00000020327	PRDM12	99	75.328	Cercocebus_atys
ENSSLDG00000009557	prdm12b	90	81.050	ENSCLAG00000005499	PRDM12	89	81.050	Chinchilla_lanigera
ENSSLDG00000009557	prdm12b	90	81.341	ENSCSAG00000014756	PRDM12	99	75.393	Chlorocebus_sabaeus
ENSSLDG00000009557	prdm12b	100	78.215	ENSCPBG00000022628	PRDM12	99	78.215	Chrysemys_picta_bellii
ENSSLDG00000009557	prdm12b	90	82.216	ENSCGRG00001015005	Prdm12	99	75.844	Cricetulus_griseus_chok1gshd
ENSSLDG00000009557	prdm12b	100	88.451	ENSCVAG00000017166	prdm12b	100	89.005	Cyprinodon_variegatus
ENSSLDG00000009557	prdm12b	100	78.571	ENSCVAG00000000944	-	100	80.102	Cyprinodon_variegatus
ENSSLDG00000009557	prdm12b	100	82.199	ENSDARG00000007430	prdm12b	100	82.199	Danio_rerio
ENSSLDG00000009557	prdm12b	90	81.686	ENSDNOG00000042302	PRDM12	99	75.781	Dasypus_novemcinctus
ENSSLDG00000009557	prdm12b	85	66.467	ENSEBUG00000016780	prdm12b	73	66.467	Eptatretus_burgeri
ENSSLDG00000009557	prdm12b	94	79.330	ENSEASG00005008472	PRDM12	99	75.844	Equus_asinus_asinus
ENSSLDG00000009557	prdm12b	94	79.330	ENSECAG00000005933	PRDM12	99	75.844	Equus_caballus
ENSSLDG00000009557	prdm12b	100	81.510	ENSELUG00000009905	prdm12b	100	81.510	Esox_lucius
ENSSLDG00000009557	prdm12b	100	86.877	ENSELUG00000013674	PRDM12	100	86.877	Esox_lucius
ENSSLDG00000009557	prdm12b	90	81.924	ENSFCAG00000043086	PRDM12	99	75.853	Felis_catus
ENSSLDG00000009557	prdm12b	100	77.953	ENSFALG00000001445	PRDM12	89	77.953	Ficedula_albicollis
ENSSLDG00000009557	prdm12b	100	89.791	ENSFHEG00000003944	prdm12b	100	89.529	Fundulus_heteroclitus
ENSSLDG00000009557	prdm12b	100	74.510	ENSFHEG00000007746	-	100	75.309	Fundulus_heteroclitus
ENSSLDG00000009557	prdm12b	100	82.732	ENSGMOG00000011797	prdm12b	100	83.077	Gadus_morhua
ENSSLDG00000009557	prdm12b	100	77.953	ENSGALG00000003895	PRDM12	99	77.953	Gallus_gallus
ENSSLDG00000009557	prdm12b	100	86.598	ENSGAFG00000010827	prdm12b	99	86.340	Gambusia_affinis
ENSSLDG00000009557	prdm12b	100	91.864	ENSGACG00000016713	prdm12b	99	91.339	Gasterosteus_aculeatus
ENSSLDG00000009557	prdm12b	100	78.215	ENSGAGG00000014083	PRDM12	99	78.215	Gopherus_agassizii
ENSSLDG00000009557	prdm12b	90	81.341	ENSGGOG00000010568	PRDM12	99	74.805	Gorilla_gorilla
ENSSLDG00000009557	prdm12b	100	74.877	ENSHBUG00000022537	-	93	76.543	Haplochromis_burtoni
ENSSLDG00000009557	prdm12b	100	92.126	ENSHBUG00000022878	prdm12b	100	90.551	Haplochromis_burtoni
ENSSLDG00000009557	prdm12b	90	81.341	ENSHGLG00000013939	PRDM12	99	75.128	Heterocephalus_glaber_female
ENSSLDG00000009557	prdm12b	100	70.909	ENSHCOG00000021167	-	100	70.649	Hippocampus_comes
ENSSLDG00000009557	prdm12b	90	89.080	ENSHCOG00000003663	prdm12b	100	82.915	Hippocampus_comes
ENSSLDG00000009557	prdm12b	100	83.812	ENSIPUG00000017053	prdm12b	100	83.812	Ictalurus_punctatus
ENSSLDG00000009557	prdm12b	100	77.428	ENSIPUG00000019544	PRDM12	100	76.903	Ictalurus_punctatus
ENSSLDG00000009557	prdm12b	95	79.339	ENSSTOG00000005986	PRDM12	89	79.063	Ictidomys_tridecemlineatus
ENSSLDG00000009557	prdm12b	90	81.633	ENSJJAG00000005424	Prdm12	98	81.633	Jaculus_jaculus
ENSSLDG00000009557	prdm12b	100	82.641	ENSKMAG00000016921	prdm12b	100	83.374	Kryptolebias_marmoratus
ENSSLDG00000009557	prdm12b	94	77.562	ENSKMAG00000021205	-	94	76.986	Kryptolebias_marmoratus
ENSSLDG00000009557	prdm12b	100	89.406	ENSLBEG00000017769	prdm12b	100	89.406	Labrus_bergylta
ENSSLDG00000009557	prdm12b	100	79.231	ENSLBEG00000007776	-	100	78.718	Labrus_bergylta
ENSSLDG00000009557	prdm12b	100	79.003	ENSLACG00000017560	PRDM12	99	78.215	Latimeria_chalumnae
ENSSLDG00000009557	prdm12b	100	82.552	ENSLOCG00000005429	prdm12b	100	83.636	Lepisosteus_oculatus
ENSSLDG00000009557	prdm12b	90	80.460	ENSLAFG00000006979	PRDM12	92	77.686	Loxodonta_africana
ENSSLDG00000009557	prdm12b	90	81.341	ENSMFAG00000040322	PRDM12	99	74.805	Macaca_fascicularis
ENSSLDG00000009557	prdm12b	90	81.341	ENSMNEG00000037234	PRDM12	99	75.328	Macaca_nemestrina
ENSSLDG00000009557	prdm12b	100	95.013	ENSMAMG00000013212	prdm12b	100	95.013	Mastacembelus_armatus
ENSSLDG00000009557	prdm12b	100	72.861	ENSMAMG00000018988	-	100	74.510	Mastacembelus_armatus
ENSSLDG00000009557	prdm12b	100	74.510	ENSMZEG00005000415	PRDM12	100	76.658	Maylandia_zebra
ENSSLDG00000009557	prdm12b	98	77.600	ENSMGAG00000005438	PRDM12	98	77.600	Meleagris_gallopavo
ENSSLDG00000009557	prdm12b	100	75.979	ENSMAUG00000013040	Prdm12	99	75.718	Mesocricetus_auratus
ENSSLDG00000009557	prdm12b	90	81.924	ENSMICG00000015480	PRDM12	99	75.065	Microcebus_murinus
ENSSLDG00000009557	prdm12b	95	79.834	ENSMOCG00000021026	Prdm12	93	79.609	Microtus_ochrogaster
ENSSLDG00000009557	prdm12b	100	77.953	ENSMODG00000012108	PRDM12	99	77.953	Monodelphis_domestica
ENSSLDG00000009557	prdm12b	84	89.062	ENSMALG00000021901	prdm12b	96	88.438	Monopterus_albus
ENSSLDG00000009557	prdm12b	90	82.216	MGP_CAROLIEiJ_G0023414	Prdm12	99	75.844	Mus_caroli
ENSSLDG00000009557	prdm12b	90	82.216	ENSMUSG00000079466	Prdm12	99	75.844	Mus_musculus
ENSSLDG00000009557	prdm12b	90	82.216	MGP_PahariEiJ_G0024871	Prdm12	99	75.844	Mus_pahari
ENSSLDG00000009557	prdm12b	90	82.216	MGP_SPRETEiJ_G0024331	Prdm12	99	75.844	Mus_spretus
ENSSLDG00000009557	prdm12b	90	81.633	ENSNGAG00000018480	Prdm12	99	76.115	Nannospalax_galili
ENSSLDG00000009557	prdm12b	100	71.538	ENSNBRG00000024312	-	100	71.208	Neolamprologus_brichardi
ENSSLDG00000009557	prdm12b	100	92.126	ENSNBRG00000006727	prdm12b	100	92.126	Neolamprologus_brichardi
ENSSLDG00000009557	prdm12b	100	70.079	ENSMEUG00000003828	PRDM12	99	70.079	Notamacropus_eugenii
ENSSLDG00000009557	prdm12b	90	81.633	ENSOPRG00000008680	PRDM12	98	81.341	Ochotona_princeps
ENSSLDG00000009557	prdm12b	98	77.688	ENSODEG00000016282	PRDM12	65	77.688	Octodon_degus
ENSSLDG00000009557	prdm12b	64	75.620	ENSOANG00000001043	PRDM12	100	75.207	Ornithorhynchus_anatinus
ENSSLDG00000009557	prdm12b	83	81.132	ENSOCUG00000008241	PRDM12	96	80.818	Oryctolagus_cuniculus
ENSSLDG00000009557	prdm12b	100	77.638	ENSORLG00000017558	-	100	79.146	Oryzias_latipes
ENSSLDG00000009557	prdm12b	100	89.267	ENSORLG00000007114	prdm12b	99	89.267	Oryzias_latipes
ENSSLDG00000009557	prdm12b	100	88.021	ENSORLG00020019565	prdm12b	99	89.062	Oryzias_latipes_hni
ENSSLDG00000009557	prdm12b	100	78.141	ENSORLG00020013167	-	100	78.894	Oryzias_latipes_hni
ENSSLDG00000009557	prdm12b	100	89.529	ENSORLG00015007621	prdm12b	99	89.791	Oryzias_latipes_hsok
ENSSLDG00000009557	prdm12b	100	77.638	ENSORLG00015003435	-	100	79.146	Oryzias_latipes_hsok
ENSSLDG00000009557	prdm12b	100	90.130	ENSOMEG00000004134	prdm12b	99	90.390	Oryzias_melastigma
ENSSLDG00000009557	prdm12b	100	79.381	ENSOMEG00000007762	-	100	79.124	Oryzias_melastigma
ENSSLDG00000009557	prdm12b	90	81.924	ENSOGAG00000007557	PRDM12	97	81.633	Otolemur_garnettii
ENSSLDG00000009557	prdm12b	80	79.344	ENSPPAG00000031506	-	97	79.016	Pan_paniscus
ENSSLDG00000009557	prdm12b	100	70.419	ENSPPRG00000023024	PRDM12	92	70.157	Panthera_pardus
ENSSLDG00000009557	prdm12b	90	81.341	ENSPTRG00000021475	PRDM12	99	75.065	Pan_troglodytes
ENSSLDG00000009557	prdm12b	90	81.341	ENSPTRG00000043324	-	99	75.065	Pan_troglodytes
ENSSLDG00000009557	prdm12b	90	81.341	ENSPANG00000025967	PRDM12	99	75.328	Papio_anubis
ENSSLDG00000009557	prdm12b	90	80.580	ENSPKIG00000004305	PRDM12	94	80.580	Paramormyrops_kingsleyae
ENSSLDG00000009557	prdm12b	100	83.202	ENSPKIG00000007228	prdm12b	100	84.293	Paramormyrops_kingsleyae
ENSSLDG00000009557	prdm12b	100	78.478	ENSPSIG00000006739	PRDM12	99	78.478	Pelodiscus_sinensis
ENSSLDG00000009557	prdm12b	100	73.750	ENSPMGG00000002356	-	100	72.794	Periophthalmus_magnuspinnatus
ENSSLDG00000009557	prdm12b	100	88.976	ENSPMGG00000008867	prdm12b	99	89.239	Periophthalmus_magnuspinnatus
ENSSLDG00000009557	prdm12b	95	79.339	ENSPEMG00000009969	Prdm12	97	77.540	Peromyscus_maniculatus_bairdii
ENSSLDG00000009557	prdm12b	100	77.953	ENSPCIG00000024119	PRDM12	99	77.953	Phascolarctos_cinereus
ENSSLDG00000009557	prdm12b	100	88.512	ENSPFOG00000019841	prdm12b	100	87.467	Poecilia_formosa
ENSSLDG00000009557	prdm12b	100	85.604	ENSPLAG00000016626	prdm12b	99	85.934	Poecilia_latipinna
ENSSLDG00000009557	prdm12b	96	85.676	ENSPMEG00000016698	prdm12b	99	85.676	Poecilia_mexicana
ENSSLDG00000009557	prdm12b	100	85.459	ENSPREG00000015073	prdm12b	99	85.459	Poecilia_reticulata
ENSSLDG00000009557	prdm12b	95	73.854	ENSPREG00000003211	-	94	73.585	Poecilia_reticulata
ENSSLDG00000009557	prdm12b	94	79.330	ENSPPYG00000019694	PRDM12	97	79.050	Pongo_abelii
ENSSLDG00000009557	prdm12b	90	81.924	ENSPCOG00000022255	PRDM12	99	75.584	Propithecus_coquereli
ENSSLDG00000009557	prdm12b	90	81.924	ENSPVAG00000001511	PRDM12	99	75.781	Pteropus_vampyrus
ENSSLDG00000009557	prdm12b	100	92.388	ENSPNYG00000009607	prdm12b	100	90.551	Pundamilia_nyererei
ENSSLDG00000009557	prdm12b	100	74.510	ENSPNYG00000013589	-	100	76.658	Pundamilia_nyererei
ENSSLDG00000009557	prdm12b	100	78.036	ENSPNAG00000013396	PRDM12	100	78.295	Pygocentrus_nattereri
ENSSLDG00000009557	prdm12b	100	81.890	ENSPNAG00000024532	prdm12b	100	82.507	Pygocentrus_nattereri
ENSSLDG00000009557	prdm12b	90	82.216	ENSRNOG00000009218	Prdm12	99	75.844	Rattus_norvegicus
ENSSLDG00000009557	prdm12b	88	81.493	ENSRBIG00000042712	PRDM12	99	74.142	Rhinopithecus_bieti
ENSSLDG00000009557	prdm12b	89	81.711	ENSRROG00000043554	PRDM12	99	81.416	Rhinopithecus_roxellana
ENSSLDG00000009557	prdm12b	100	77.749	ENSSHAG00000015972	PRDM12	99	77.749	Sarcophilus_harrisii
ENSSLDG00000009557	prdm12b	100	90.000	ENSSMAG00000003754	prdm12b	100	90.513	Scophthalmus_maximus
ENSSLDG00000009557	prdm12b	100	97.135	ENSSDUG00000023498	prdm12b	100	97.135	Seriola_dumerili
ENSSLDG00000009557	prdm12b	100	81.234	ENSSDUG00000019071	-	100	81.748	Seriola_dumerili
ENSSLDG00000009557	prdm12b	100	78.478	ENSSPUG00000013424	PRDM12	99	78.478	Sphenodon_punctatus
ENSSLDG00000009557	prdm12b	100	91.667	ENSSPAG00000018824	prdm12b	100	92.708	Stegastes_partitus
ENSSLDG00000009557	prdm12b	100	72.265	ENSSPAG00000022420	-	100	73.282	Stegastes_partitus
ENSSLDG00000009557	prdm12b	90	81.924	ENSSSCG00000005703	PRDM12	99	75.916	Sus_scrofa
ENSSLDG00000009557	prdm12b	100	88.714	ENSTRUG00000018659	prdm12b	100	88.714	Takifugu_rubripes
ENSSLDG00000009557	prdm12b	100	77.487	ENSTRUG00000013239	-	100	77.225	Takifugu_rubripes
ENSSLDG00000009557	prdm12b	100	74.740	ENSTNIG00000005859	-	99	74.219	Tetraodon_nigroviridis
ENSSLDG00000009557	prdm12b	100	87.402	ENSTNIG00000009020	prdm12b	99	87.402	Tetraodon_nigroviridis
ENSSLDG00000009557	prdm12b	90	81.924	ENSUAMG00000009653	PRDM12	95	78.261	Ursus_americanus
ENSSLDG00000009557	prdm12b	90	81.924	ENSVVUG00000027662	PRDM12	77	81.633	Vulpes_vulpes
ENSSLDG00000009557	prdm12b	100	87.240	ENSXCOG00000002836	prdm12b	99	87.306	Xiphophorus_couchianus
ENSSLDG00000009557	prdm12b	100	75.490	ENSXMAG00000028012	-	100	77.284	Xiphophorus_maculatus
ENSSLDG00000009557	prdm12b	100	88.021	ENSXMAG00000005537	prdm12b	100	88.083	Xiphophorus_maculatus