EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009573 (Gene tree)
Gene ID: -
Gene Symbol: rab34a
Alias: rab34|zgc:101620
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3368 bases
Position: chrPEQF01097164.1:20245-23612
Accession: 111650674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012069	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSSLDP00000012024	MMR_HSR1	PF01926.23	3.1e-05	1	1
ENSSLDP00000012035	MMR_HSR1	PF01926.23	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012465	-	841	XM_023400594	ENSSLDP00000012024	266 (aa)	XP_023256362	UPI000C6F46C6
ENSSLDT00000012514	-	723	-	ENSSLDP00000012069	240 (aa)	-	-
ENSSLDT00000012476	-	865	-	ENSSLDP00000012035	274 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000009573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009573	rab34a	76	33.880	ENSSLDG00000006014	rab18b	88	33.880
ENSSLDG00000009573	rab34a	70	35.928	ENSSLDG00000023317	rab15	77	35.928
ENSSLDG00000009573	rab34a	85	33.803	ENSSLDG00000018024	zgc:171927	96	33.803
ENSSLDG00000009573	rab34a	69	35.758	ENSSLDG00000022555	rab2a	76	35.758
ENSSLDG00000009573	rab34a	76	33.690	ENSSLDG00000005221	rab11ba	78	34.426
ENSSLDG00000009573	rab34a	76	37.363	ENSSLDG00000003631	si:dkey-16l2.16	97	34.862
ENSSLDG00000009573	rab34a	76	33.155	ENSSLDG00000005275	-	85	33.333
ENSSLDG00000009573	rab34a	70	33.333	ENSSLDG00000022239	rab12	68	33.333
ENSSLDG00000009573	rab34a	52	43.846	ENSSLDG00000019214	zgc:101559	56	43.846
ENSSLDG00000009573	rab34a	68	30.303	ENSSLDG00000025169	rhebl1	86	30.303
ENSSLDG00000009573	rab34a	67	38.037	ENSSLDG00000012251	rab1ba	79	38.037
ENSSLDG00000009573	rab34a	65	34.375	ENSSLDG00000020676	rab11bb	70	35.256
ENSSLDG00000009573	rab34a	83	31.343	ENSSLDG00000020354	rab42a	90	31.343
ENSSLDG00000009573	rab34a	86	32.536	ENSSLDG00000012091	rab25b	94	32.536
ENSSLDG00000009573	rab34a	67	32.500	ENSSLDG00000020438	rab22a	81	32.500
ENSSLDG00000009573	rab34a	71	37.209	ENSSLDG00000011757	-	81	37.209
ENSSLDG00000009573	rab34a	69	74.863	ENSSLDG00000014812	rab34b	89	74.863
ENSSLDG00000009573	rab34a	85	31.280	ENSSLDG00000002646	si:dkey-34d22.5	95	31.280
ENSSLDG00000009573	rab34a	77	31.280	ENSSLDG00000012116	rab11al	93	31.280
ENSSLDG00000009573	rab34a	52	36.090	ENSSLDG00000004352	-	62	36.090
ENSSLDG00000009573	rab34a	73	34.091	ENSSLDG00000006977	rab18a	85	34.091
ENSSLDG00000009573	rab34a	70	37.725	ENSSLDG00000021984	RAB15	77	37.725
ENSSLDG00000009573	rab34a	85	30.144	ENSSLDG00000010880	rab25a	93	30.144
ENSSLDG00000009573	rab34a	75	33.880	ENSSLDG00000011597	si:dkey-13a21.4	88	33.880
ENSSLDG00000009573	rab34a	70	37.500	ENSSLDG00000005718	-	77	37.500
ENSSLDG00000009573	rab34a	67	39.130	ENSSLDG00000012474	rab6bb	76	39.130
ENSSLDG00000009573	rab34a	73	36.932	ENSSLDG00000003264	rab6ba	83	36.932
ENSSLDG00000009573	rab34a	72	32.000	ENSSLDG00000024959	-	84	32.000
ENSSLDG00000009573	rab34a	77	35.648	ENSSLDG00000006360	RAB39B	96	35.648
ENSSLDG00000009573	rab34a	99	55.019	ENSSLDG00000009464	rab36	100	55.019
ENSSLDG00000009573	rab34a	67	37.267	ENSSLDG00000022282	rab41	75	37.267
ENSSLDG00000009573	rab34a	69	36.047	ENSSLDG00000008584	rab33ba	75	36.047
ENSSLDG00000009573	rab34a	65	40.127	ENSSLDG00000009068	-	73	40.127
ENSSLDG00000009573	rab34a	67	31.250	ENSSLDG00000017771	rab5c	71	31.250
ENSSLDG00000009573	rab34a	67	38.509	ENSSLDG00000015289	-	76	38.509
ENSSLDG00000009573	rab34a	86	30.806	ENSSLDG00000009438	rab11a	93	31.401
ENSSLDG00000009573	rab34a	63	36.000	ENSSLDG00000000287	rab23	87	35.979
ENSSLDG00000009573	rab34a	70	37.126	ENSSLDG00000010503	rab14	76	37.126
ENSSLDG00000009573	rab34a	67	36.250	ENSSLDG00000022533	rab30	77	36.250
ENSSLDG00000009573	rab34a	67	32.500	ENSSLDG00000011069	rab5aa	73	32.500
ENSSLDG00000009573	rab34a	70	32.335	ENSSLDG00000009725	-	80	32.335
ENSSLDG00000009573	rab34a	67	40.000	ENSSLDG00000015823	-	79	40.000
ENSSLDG00000009573	rab34a	72	32.000	ENSSLDG00000012391	RAB7A	84	32.000
ENSSLDG00000009573	rab34a	67	38.037	ENSSLDG00000018942	rab1ab	78	38.037
ENSSLDG00000009573	rab34a	53	42.969	ENSSLDG00000008070	-	53	42.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009573	rab34a	97	77.907	ENSG00000109113	RAB34	100	79.866	Homo_sapiens
ENSSLDG00000009573	rab34a	100	91.729	ENSAPOG00000003165	rab34a	100	91.729	Acanthochromis_polyacanthus
ENSSLDG00000009573	rab34a	97	79.070	ENSAMEG00000004697	RAB34	82	79.070	Ailuropoda_melanoleuca
ENSSLDG00000009573	rab34a	83	84.753	ENSACIG00000008620	rab34a	100	84.753	Amphilophus_citrinellus
ENSSLDG00000009573	rab34a	100	92.105	ENSAOCG00000018544	rab34a	100	92.105	Amphiprion_ocellaris
ENSSLDG00000009573	rab34a	100	92.481	ENSAPEG00000010503	rab34a	100	92.481	Amphiprion_percula
ENSSLDG00000009573	rab34a	100	92.884	ENSATEG00000023047	rab34a	100	92.884	Anabas_testudineus
ENSSLDG00000009573	rab34a	97	78.682	ENSANAG00000023861	RAB34	99	78.682	Aotus_nancymaae
ENSSLDG00000009573	rab34a	100	92.135	ENSACLG00000005093	rab34a	100	92.135	Astatotilapia_calliptera
ENSSLDG00000009573	rab34a	97	83.398	ENSAMXG00000043003	rab34a	100	83.398	Astyanax_mexicanus
ENSSLDG00000009573	rab34a	93	78.667	ENSBTAG00000046129	RAB34	99	70.979	Bos_taurus
ENSSLDG00000009573	rab34a	97	78.295	ENSCJAG00000013101	RAB34	99	78.295	Callithrix_jacchus
ENSSLDG00000009573	rab34a	97	77.519	ENSCAFG00000018780	RAB34	99	77.519	Canis_familiaris
ENSSLDG00000009573	rab34a	97	77.519	ENSCAFG00020011740	RAB34	99	77.519	Canis_lupus_dingo
ENSSLDG00000009573	rab34a	97	78.682	ENSCHIG00000014703	RAB34	99	78.682	Capra_hircus
ENSSLDG00000009573	rab34a	97	77.907	ENSTSYG00000030891	RAB34	99	77.907	Carlito_syrichta
ENSSLDG00000009573	rab34a	93	76.889	ENSCAPG00000008237	RAB34	99	78.661	Cavia_aperea
ENSSLDG00000009573	rab34a	97	77.519	ENSCPOG00000001449	RAB34	99	77.519	Cavia_porcellus
ENSSLDG00000009573	rab34a	97	78.682	ENSCCAG00000034632	RAB34	99	78.682	Cebus_capucinus
ENSSLDG00000009573	rab34a	97	77.519	ENSCLAG00000009672	RAB34	99	77.519	Chinchilla_lanigera
ENSSLDG00000009573	rab34a	97	76.744	ENSCSAG00000007143	RAB34	99	76.744	Chlorocebus_sabaeus
ENSSLDG00000009573	rab34a	97	76.357	ENSCHOG00000009871	RAB34	99	76.357	Choloepus_hoffmanni
ENSSLDG00000009573	rab34a	99	77.652	ENSCPBG00000020275	RAB34	99	78.764	Chrysemys_picta_bellii
ENSSLDG00000009573	rab34a	97	77.132	ENSCANG00000033566	RAB34	99	77.132	Colobus_angolensis_palliatus
ENSSLDG00000009573	rab34a	97	78.295	ENSCGRG00001000893	Rab34	99	78.295	Cricetulus_griseus_chok1gshd
ENSSLDG00000009573	rab34a	97	78.295	ENSCGRG00000017588	Rab34	99	78.295	Cricetulus_griseus_crigri
ENSSLDG00000009573	rab34a	97	89.575	ENSCSEG00000012961	rab34a	100	89.575	Cynoglossus_semilaevis
ENSSLDG00000009573	rab34a	100	88.722	ENSCVAG00000018191	rab34a	100	88.722	Cyprinodon_variegatus
ENSSLDG00000009573	rab34a	97	81.923	ENSDARG00000045628	rab34a	100	82.573	Danio_rerio
ENSSLDG00000009573	rab34a	97	77.907	ENSDNOG00000019485	RAB34	99	77.907	Dasypus_novemcinctus
ENSSLDG00000009573	rab34a	97	77.132	ENSDORG00000011452	Rab34	99	77.132	Dipodomys_ordii
ENSSLDG00000009573	rab34a	97	77.220	ENSEASG00005009898	RAB34	100	77.220	Equus_asinus_asinus
ENSSLDG00000009573	rab34a	97	76.923	ENSECAG00000007212	RAB34	100	76.923	Equus_caballus
ENSSLDG00000009573	rab34a	63	84.211	ENSEEUG00000004731	RAB34	100	84.211	Erinaceus_europaeus
ENSSLDG00000009573	rab34a	99	85.283	ENSELUG00000022157	rab34a	100	85.283	Esox_lucius
ENSSLDG00000009573	rab34a	97	79.070	ENSFCAG00000003937	RAB34	99	79.070	Felis_catus
ENSSLDG00000009573	rab34a	97	78.295	ENSFDAG00000016178	RAB34	99	78.295	Fukomys_damarensis
ENSSLDG00000009573	rab34a	97	89.189	ENSFHEG00000013691	rab34a	100	89.189	Fundulus_heteroclitus
ENSSLDG00000009573	rab34a	100	84.211	ENSGMOG00000016238	rab34a	100	84.211	Gadus_morhua
ENSSLDG00000009573	rab34a	97	77.606	ENSGALG00000026315	RAB34	100	77.606	Gallus_gallus
ENSSLDG00000009573	rab34a	100	90.602	ENSGAFG00000012579	rab34a	100	90.602	Gambusia_affinis
ENSSLDG00000009573	rab34a	100	92.481	ENSGACG00000011190	rab34a	100	92.481	Gasterosteus_aculeatus
ENSSLDG00000009573	rab34a	93	76.786	ENSGAGG00000012473	RAB34	97	74.672	Gopherus_agassizii
ENSSLDG00000009573	rab34a	97	77.907	ENSGGOG00000016726	RAB34	99	77.907	Gorilla_gorilla
ENSSLDG00000009573	rab34a	100	91.729	ENSHBUG00000016064	rab34a	100	91.729	Haplochromis_burtoni
ENSSLDG00000009573	rab34a	97	77.220	ENSHGLG00000008023	RAB34	100	77.220	Heterocephalus_glaber_female
ENSSLDG00000009573	rab34a	97	77.220	ENSHGLG00100017982	RAB34	100	77.220	Heterocephalus_glaber_male
ENSSLDG00000009573	rab34a	100	83.083	ENSHCOG00000020527	rab34a	100	83.083	Hippocampus_comes
ENSSLDG00000009573	rab34a	97	83.012	ENSIPUG00000017447	rab34a	100	83.012	Ictalurus_punctatus
ENSSLDG00000009573	rab34a	97	77.519	ENSSTOG00000025062	RAB34	99	77.519	Ictidomys_tridecemlineatus
ENSSLDG00000009573	rab34a	97	78.295	ENSJJAG00000010285	Rab34	99	78.295	Jaculus_jaculus
ENSSLDG00000009573	rab34a	100	87.218	ENSKMAG00000019647	rab34a	100	87.218	Kryptolebias_marmoratus
ENSSLDG00000009573	rab34a	100	92.857	ENSLBEG00000026006	rab34a	100	92.857	Labrus_bergylta
ENSSLDG00000009573	rab34a	97	78.378	ENSLACG00000001081	RAB34	100	78.378	Latimeria_chalumnae
ENSSLDG00000009573	rab34a	98	85.057	ENSLOCG00000005802	rab34a	98	85.057	Lepisosteus_oculatus
ENSSLDG00000009573	rab34a	97	76.834	ENSLAFG00000013385	RAB34	100	76.834	Loxodonta_africana
ENSSLDG00000009573	rab34a	97	77.132	ENSMFAG00000045768	RAB34	99	77.132	Macaca_fascicularis
ENSSLDG00000009573	rab34a	97	77.132	ENSMMUG00000007293	RAB34	99	77.132	Macaca_mulatta
ENSSLDG00000009573	rab34a	97	77.220	ENSMNEG00000030368	RAB34	99	77.220	Macaca_nemestrina
ENSSLDG00000009573	rab34a	87	80.383	ENSMLEG00000034269	RAB34	99	76.682	Mandrillus_leucophaeus
ENSSLDG00000009573	rab34a	100	94.382	ENSMAMG00000018672	rab34a	100	94.382	Mastacembelus_armatus
ENSSLDG00000009573	rab34a	100	92.481	ENSMZEG00005008306	rab34a	100	92.481	Maylandia_zebra
ENSSLDG00000009573	rab34a	97	78.682	ENSMAUG00000017730	Rab34	99	78.682	Mesocricetus_auratus
ENSSLDG00000009573	rab34a	97	77.992	ENSMICG00000016913	RAB34	99	77.992	Microcebus_murinus
ENSSLDG00000009573	rab34a	97	78.295	ENSMOCG00000016580	Rab34	99	78.295	Microtus_ochrogaster
ENSSLDG00000009573	rab34a	97	80.916	ENSMMOG00000014400	rab34a	100	80.916	Mola_mola
ENSSLDG00000009573	rab34a	91	68.182	ENSMODG00000019295	RAB34	91	68.182	Monodelphis_domestica
ENSSLDG00000009573	rab34a	100	92.481	ENSMALG00000016715	rab34a	100	92.481	Monopterus_albus
ENSSLDG00000009573	rab34a	97	78.682	MGP_CAROLIEiJ_G0016794	Rab34	99	78.682	Mus_caroli
ENSSLDG00000009573	rab34a	97	78.295	ENSMUSG00000002059	Rab34	99	78.295	Mus_musculus
ENSSLDG00000009573	rab34a	97	77.519	MGP_PahariEiJ_G0017931	Rab34	99	77.519	Mus_pahari
ENSSLDG00000009573	rab34a	97	78.295	MGP_SPRETEiJ_G0017637	Rab34	99	78.295	Mus_spretus
ENSSLDG00000009573	rab34a	97	77.907	ENSMPUG00000014191	RAB34	99	77.907	Mustela_putorius_furo
ENSSLDG00000009573	rab34a	87	82.297	ENSMLUG00000012440	RAB34	99	82.297	Myotis_lucifugus
ENSSLDG00000009573	rab34a	97	77.519	ENSNGAG00000002744	Rab34	99	77.519	Nannospalax_galili
ENSSLDG00000009573	rab34a	97	91.538	ENSNBRG00000019750	rab34a	100	91.538	Neolamprologus_brichardi
ENSSLDG00000009573	rab34a	97	77.907	ENSNLEG00000002777	RAB34	99	77.907	Nomascus_leucogenys
ENSSLDG00000009573	rab34a	93	75.221	ENSMEUG00000009450	RAB34	99	76.667	Notamacropus_eugenii
ENSSLDG00000009573	rab34a	97	78.682	ENSOPRG00000012602	RAB34	99	78.682	Ochotona_princeps
ENSSLDG00000009573	rab34a	97	76.744	ENSODEG00000012270	RAB34	99	76.744	Octodon_degus
ENSSLDG00000009573	rab34a	100	92.105	ENSONIG00000013175	rab34a	100	92.105	Oreochromis_niloticus
ENSSLDG00000009573	rab34a	100	61.776	ENSOANG00000000147	RAB34	100	62.162	Ornithorhynchus_anatinus
ENSSLDG00000009573	rab34a	97	77.907	ENSOCUG00000023006	RAB34	82	77.907	Oryctolagus_cuniculus
ENSSLDG00000009573	rab34a	100	88.722	ENSORLG00000004394	rab34a	100	88.722	Oryzias_latipes
ENSSLDG00000009573	rab34a	100	88.722	ENSORLG00020010041	rab34a	100	88.722	Oryzias_latipes_hni
ENSSLDG00000009573	rab34a	100	89.474	ENSORLG00015014829	rab34a	100	89.474	Oryzias_latipes_hsok
ENSSLDG00000009573	rab34a	99	86.792	ENSOMEG00000003647	rab34a	86	86.792	Oryzias_melastigma
ENSSLDG00000009573	rab34a	97	78.295	ENSOARG00000003396	RAB34	95	78.295	Ovis_aries
ENSSLDG00000009573	rab34a	97	77.907	ENSPPAG00000037180	RAB34	99	77.907	Pan_paniscus
ENSSLDG00000009573	rab34a	97	79.070	ENSPPRG00000001286	RAB34	99	79.070	Panthera_pardus
ENSSLDG00000009573	rab34a	97	79.070	ENSPTIG00000021241	RAB34	99	79.070	Panthera_tigris_altaica
ENSSLDG00000009573	rab34a	97	77.907	ENSPTRG00000008931	RAB34	99	77.907	Pan_troglodytes
ENSSLDG00000009573	rab34a	97	77.132	ENSPANG00000023435	RAB34	99	77.132	Papio_anubis
ENSSLDG00000009573	rab34a	97	82.625	ENSPKIG00000006695	rab34a	100	82.625	Paramormyrops_kingsleyae
ENSSLDG00000009573	rab34a	97	88.031	ENSPMGG00000004027	rab34a	100	88.031	Periophthalmus_magnuspinnatus
ENSSLDG00000009573	rab34a	97	78.682	ENSPEMG00000015055	Rab34	99	78.682	Peromyscus_maniculatus_bairdii
ENSSLDG00000009573	rab34a	97	76.448	ENSPCIG00000017945	-	65	76.448	Phascolarctos_cinereus
ENSSLDG00000009573	rab34a	100	89.850	ENSPFOG00000008547	rab34a	86	89.850	Poecilia_formosa
ENSSLDG00000009573	rab34a	100	90.226	ENSPLAG00000022991	rab34a	95	90.226	Poecilia_latipinna
ENSSLDG00000009573	rab34a	100	90.226	ENSPMEG00000002086	rab34a	100	90.226	Poecilia_mexicana
ENSSLDG00000009573	rab34a	77	90.244	ENSPREG00000008951	rab34a	83	90.244	Poecilia_reticulata
ENSSLDG00000009573	rab34a	97	75.194	ENSPPYG00000008107	-	99	75.194	Pongo_abelii
ENSSLDG00000009573	rab34a	97	77.132	ENSPCAG00000016994	RAB34	99	77.132	Procavia_capensis
ENSSLDG00000009573	rab34a	97	78.295	ENSPCOG00000021648	RAB34	99	78.295	Propithecus_coquereli
ENSSLDG00000009573	rab34a	97	78.295	ENSPVAG00000002921	RAB34	99	78.295	Pteropus_vampyrus
ENSSLDG00000009573	rab34a	97	92.308	ENSPNYG00000017514	rab34a	100	92.308	Pundamilia_nyererei
ENSSLDG00000009573	rab34a	97	86.100	ENSPNAG00000003179	rab34a	100	86.100	Pygocentrus_nattereri
ENSSLDG00000009573	rab34a	97	78.295	ENSRNOG00000023375	Rab34	99	78.295	Rattus_norvegicus
ENSSLDG00000009573	rab34a	97	76.357	ENSRBIG00000038841	RAB34	99	76.357	Rhinopithecus_bieti
ENSSLDG00000009573	rab34a	97	76.357	ENSRROG00000004951	RAB34	99	76.357	Rhinopithecus_roxellana
ENSSLDG00000009573	rab34a	97	75.581	ENSSBOG00000029883	RAB34	99	75.581	Saimiri_boliviensis_boliviensis
ENSSLDG00000009573	rab34a	95	77.559	ENSSHAG00000014522	RAB34	77	77.559	Sarcophilus_harrisii
ENSSLDG00000009573	rab34a	97	83.398	ENSSFOG00015004325	rab34a	100	83.398	Scleropages_formosus
ENSSLDG00000009573	rab34a	100	92.884	ENSSMAG00000004343	rab34a	100	92.884	Scophthalmus_maximus
ENSSLDG00000009573	rab34a	100	99.248	ENSSDUG00000010942	rab34a	100	99.248	Seriola_dumerili
ENSSLDG00000009573	rab34a	100	93.233	ENSSPAG00000017348	rab34a	100	93.233	Stegastes_partitus
ENSSLDG00000009573	rab34a	97	78.295	ENSSSCG00000017769	RAB34	99	78.295	Sus_scrofa
ENSSLDG00000009573	rab34a	97	70.498	ENSTRUG00000010393	-	100	70.498	Takifugu_rubripes
ENSSLDG00000009573	rab34a	76	84.390	ENSTRUG00000005937	rab34a	91	84.390	Takifugu_rubripes
ENSSLDG00000009573	rab34a	97	87.645	ENSTNIG00000016231	rab34a	100	87.645	Tetraodon_nigroviridis
ENSSLDG00000009573	rab34a	97	77.907	ENSTBEG00000005193	RAB34	99	77.907	Tupaia_belangeri
ENSSLDG00000009573	rab34a	97	78.295	ENSTTRG00000004102	RAB34	99	78.295	Tursiops_truncatus
ENSSLDG00000009573	rab34a	97	78.295	ENSUAMG00000005003	RAB34	99	78.295	Ursus_americanus
ENSSLDG00000009573	rab34a	93	77.778	ENSUMAG00000011766	-	63	79.498	Ursus_maritimus
ENSSLDG00000009573	rab34a	97	77.519	ENSVVUG00000017083	RAB34	99	77.519	Vulpes_vulpes
ENSSLDG00000009573	rab34a	97	77.220	ENSXETG00000019257	rab34	100	77.220	Xenopus_tropicalis
ENSSLDG00000009573	rab34a	97	90.347	ENSXCOG00000009541	rab34a	100	90.347	Xiphophorus_couchianus
ENSSLDG00000009573	rab34a	100	90.602	ENSXMAG00000026496	rab34a	100	90.602	Xiphophorus_maculatus