EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009745 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6466 bases
Position: chrPEQF01098777.1:183185-189650
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012252	RRM_1	PF00076.22	5.2e-25	1	2
ENSSLDP00000012252	RRM_1	PF00076.22	5.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012699	-	768	-	ENSSLDP00000012252	255 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000009745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009745	srsf4	60	70.779	ENSSLDG00000022841	srsf6a	53	62.903
ENSSLDG00000009745	srsf4	55	37.725	ENSSLDG00000016868	-	71	35.632
ENSSLDG00000009745	srsf4	97	49.104	ENSSLDG00000004146	srsf5a	94	48.727
ENSSLDG00000009745	srsf4	58	34.054	ENSSLDG00000016895	-	71	39.412
ENSSLDG00000009745	srsf4	77	33.906	ENSSLDG00000010543	-	66	41.718
ENSSLDG00000009745	srsf4	59	56.354	ENSSLDG00000023255	srsf5b	82	53.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009745	srsf4	60	63.128	ENSAPOG00000023399	-	60	63.128	Acanthochromis_polyacanthus
ENSSLDG00000009745	srsf4	97	61.567	ENSACIG00000018649	srsf4	90	72.500	Amphilophus_citrinellus
ENSSLDG00000009745	srsf4	55	76.250	ENSAOCG00000005997	srsf4	92	76.250	Amphiprion_ocellaris
ENSSLDG00000009745	srsf4	58	87.273	ENSAPEG00000020826	srsf4	76	63.000	Amphiprion_percula
ENSSLDG00000009745	srsf4	88	72.325	ENSATEG00000005680	srsf4	89	71.536	Anabas_testudineus
ENSSLDG00000009745	srsf4	62	79.545	ENSACLG00000003395	srsf4	68	79.006	Astatotilapia_calliptera
ENSSLDG00000009745	srsf4	61	62.842	ENSACLG00000021269	-	68	54.472	Astatotilapia_calliptera
ENSSLDG00000009745	srsf4	98	61.624	ENSAMXG00000034811	srsf4	70	77.095	Astyanax_mexicanus
ENSSLDG00000009745	srsf4	99	43.719	WBGene00004698	rsp-1	97	38.194	Caenorhabditis_elegans
ENSSLDG00000009745	srsf4	98	56.985	ENSCHIG00000022096	SRSF4	65	54.962	Capra_hircus
ENSSLDG00000009745	srsf4	58	50.273	ENSCING00000011362	-	65	49.733	Ciona_intestinalis
ENSSLDG00000009745	srsf4	59	48.168	ENSCING00000024718	-	56	48.705	Ciona_intestinalis
ENSSLDG00000009745	srsf4	61	50.000	ENSCING00000020631	-	80	51.282	Ciona_intestinalis
ENSSLDG00000009745	srsf4	60	54.040	ENSCING00000012370	-	68	53.769	Ciona_intestinalis
ENSSLDG00000009745	srsf4	96	49.817	ENSCSAVG00000002581	-	70	58.564	Ciona_savignyi
ENSSLDG00000009745	srsf4	62	72.872	ENSCSEG00000010058	srsf4	75	70.492	Cynoglossus_semilaevis
ENSSLDG00000009745	srsf4	62	72.678	ENSDARG00000105293	srsf4	50	73.770	Danio_rerio
ENSSLDG00000009745	srsf4	60	54.645	FBgn0004587	B52	95	46.094	Drosophila_melanogaster
ENSSLDG00000009745	srsf4	60	52.778	ENSEBUG00000001681	srsf4	67	52.778	Eptatretus_burgeri
ENSSLDG00000009745	srsf4	53	48.718	ENSEBUG00000003129	srsf4	69	47.097	Eptatretus_burgeri
ENSSLDG00000009745	srsf4	96	54.575	ENSELUG00000017551	srsf4	95	54.887	Esox_lucius
ENSSLDG00000009745	srsf4	92	58.131	ENSFHEG00000007472	srsf4	51	100.000	Fundulus_heteroclitus
ENSSLDG00000009745	srsf4	61	78.652	ENSGMOG00000012906	srsf4	57	78.771	Gadus_morhua
ENSSLDG00000009745	srsf4	89	59.924	ENSGAFG00000018496	srsf4	76	65.000	Gambusia_affinis
ENSSLDG00000009745	srsf4	62	82.682	ENSGACG00000002389	srsf4	56	82.778	Gasterosteus_aculeatus
ENSSLDG00000009745	srsf4	61	62.842	ENSHBUG00000011326	-	51	63.934	Haplochromis_burtoni
ENSSLDG00000009745	srsf4	80	68.103	ENSHCOG00000012540	srsf4	68	76.882	Hippocampus_comes
ENSSLDG00000009745	srsf4	62	82.081	ENSKMAG00000013631	srsf4	82	68.269	Kryptolebias_marmoratus
ENSSLDG00000009745	srsf4	60	63.187	ENSLOCG00000001442	-	50	65.217	Lepisosteus_oculatus
ENSSLDG00000009745	srsf4	89	66.802	ENSMAMG00000004888	srsf4	69	80.791	Mastacembelus_armatus
ENSSLDG00000009745	srsf4	62	79.545	ENSMZEG00005026275	srsf4	68	79.006	Maylandia_zebra
ENSSLDG00000009745	srsf4	98	62.153	ENSMMOG00000013653	srsf4	76	84.390	Mola_mola
ENSSLDG00000009745	srsf4	61	71.910	ENSMODG00000011052	SRSF4	56	72.067	Monodelphis_domestica
ENSSLDG00000009745	srsf4	88	95.588	ENSMALG00000013392	srsf4	88	74.026	Monopterus_albus
ENSSLDG00000009745	srsf4	61	76.667	ENSONIG00000013730	srsf4	67	60.985	Oreochromis_niloticus
ENSSLDG00000009745	srsf4	62	75.556	ENSORLG00020016052	srsf4	66	78.212	Oryzias_latipes_hni
ENSSLDG00000009745	srsf4	88	64.000	ENSORLG00015007566	srsf4	71	78.212	Oryzias_latipes_hsok
ENSSLDG00000009745	srsf4	62	76.243	ENSOMEG00000005541	srsf4	51	78.212	Oryzias_melastigma
ENSSLDG00000009745	srsf4	62	74.346	ENSPMGG00000013436	srsf4	95	67.188	Periophthalmus_magnuspinnatus
ENSSLDG00000009745	srsf4	60	54.396	ENSPMAG00000009397	srsf4	68	55.080	Petromyzon_marinus
ENSSLDG00000009745	srsf4	98	61.852	ENSPLAG00000008812	srsf4	65	67.213	Poecilia_latipinna
ENSSLDG00000009745	srsf4	61	76.923	ENSPMEG00000023638	srsf4	53	77.049	Poecilia_mexicana
ENSSLDG00000009745	srsf4	98	61.852	ENSPREG00000009639	srsf4	50	81.287	Poecilia_reticulata
ENSSLDG00000009745	srsf4	75	62.934	ENSPNYG00000003796	srsf4	56	78.689	Pundamilia_nyererei
ENSSLDG00000009745	srsf4	60	78.947	ENSPNAG00000023844	srsf4	54	78.857	Pygocentrus_nattereri
ENSSLDG00000009745	srsf4	60	79.070	ENSSFOG00015020292	srsf4	82	66.667	Scleropages_formosus
ENSSLDG00000009745	srsf4	62	76.882	ENSSMAG00000001707	srsf4	50	77.297	Scophthalmus_maximus
ENSSLDG00000009745	srsf4	80	67.636	ENSSDUG00000007387	srsf4	54	81.356	Seriola_dumerili
ENSSLDG00000009745	srsf4	79	84.091	ENSSPAG00000014538	srsf4	83	71.186	Stegastes_partitus
ENSSLDG00000009745	srsf4	82	67.045	ENSTRUG00000011891	srsf4	84	65.637	Takifugu_rubripes
ENSSLDG00000009745	srsf4	61	68.944	ENSXCOG00000003212	-	74	49.615	Xiphophorus_couchianus
ENSSLDG00000009745	srsf4	61	81.871	ENSXCOG00000018826	srsf4	89	66.102	Xiphophorus_couchianus