EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000009974 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6167 bases
Position: chrPEQF01099442.1:664340-670506
Accession: 111646104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012533	SAP	PF02037.27	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012987	-	2446	XM_023395506	ENSSLDP00000012533	610 (aa)	XP_023251274	UPI000C6FA208

Gene Model

Click here to download ENSSLDG00000009974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009974	xrcc6	99	55.556	ENSG00000196419	XRCC6	99	55.719	Homo_sapiens
ENSSLDG00000009974	xrcc6	99	87.849	ENSAPOG00000012704	xrcc6	100	87.849	Acanthochromis_polyacanthus
ENSSLDG00000009974	xrcc6	100	87.377	ENSACIG00000021277	xrcc6	100	87.377	Amphilophus_citrinellus
ENSSLDG00000009974	xrcc6	100	87.869	ENSAOCG00000021344	xrcc6	100	87.869	Amphiprion_ocellaris
ENSSLDG00000009974	xrcc6	100	88.033	ENSAPEG00000020712	xrcc6	100	88.033	Amphiprion_percula
ENSSLDG00000009974	xrcc6	100	90.164	ENSATEG00000007119	xrcc6	100	90.164	Anabas_testudineus
ENSSLDG00000009974	xrcc6	90	59.636	ENSAPLG00000004469	XRCC6	99	59.636	Anas_platyrhynchos
ENSSLDG00000009974	xrcc6	99	49.673	ENSANAG00000035230	-	99	49.510	Aotus_nancymaae
ENSSLDG00000009974	xrcc6	99	46.764	ENSANAG00000023445	-	99	46.764	Aotus_nancymaae
ENSSLDG00000009974	xrcc6	99	55.556	ENSANAG00000018684	XRCC6	98	56.569	Aotus_nancymaae
ENSSLDG00000009974	xrcc6	99	48.768	ENSANAG00000020017	-	99	48.768	Aotus_nancymaae
ENSSLDG00000009974	xrcc6	100	87.869	ENSACLG00000018608	xrcc6	100	87.869	Astatotilapia_calliptera
ENSSLDG00000009974	xrcc6	99	78.489	ENSAMXG00000007545	xrcc6	100	78.489	Astyanax_mexicanus
ENSSLDG00000009974	xrcc6	99	55.556	ENSCJAG00000045512	XRCC6	99	55.556	Callithrix_jacchus
ENSSLDG00000009974	xrcc6	99	55.065	ENSTSYG00000011348	XRCC6	99	55.392	Carlito_syrichta
ENSSLDG00000009974	xrcc6	99	46.470	ENSCCAG00000037663	-	97	46.305	Cebus_capucinus
ENSSLDG00000009974	xrcc6	99	52.288	ENSCCAG00000030041	-	95	52.124	Cebus_capucinus
ENSSLDG00000009974	xrcc6	99	45.663	ENSCCAG00000035711	-	99	45.663	Cebus_capucinus
ENSSLDG00000009974	xrcc6	99	53.374	ENSCCAG00000030468	-	99	53.374	Cebus_capucinus
ENSSLDG00000009974	xrcc6	99	55.556	ENSCATG00000042366	XRCC6	99	55.719	Cercocebus_atys
ENSSLDG00000009974	xrcc6	99	55.319	ENSCLAG00000016669	XRCC6	99	55.155	Chinchilla_lanigera
ENSSLDG00000009974	xrcc6	99	55.556	ENSCSAG00000005784	XRCC6	99	55.719	Chlorocebus_sabaeus
ENSSLDG00000009974	xrcc6	99	58.170	ENSCPBG00000020535	XRCC6	99	57.843	Chrysemys_picta_bellii
ENSSLDG00000009974	xrcc6	98	34.942	ENSCING00000000633	-	95	34.708	Ciona_intestinalis
ENSSLDG00000009974	xrcc6	99	55.556	ENSCANG00000031032	XRCC6	99	55.719	Colobus_angolensis_palliatus
ENSSLDG00000009974	xrcc6	99	51.639	ENSCGRG00001019029	Xrcc6	99	51.639	Cricetulus_griseus_chok1gshd
ENSSLDG00000009974	xrcc6	99	55.738	ENSCGRG00000001528	Xrcc6	99	55.738	Cricetulus_griseus_crigri
ENSSLDG00000009974	xrcc6	100	82.787	ENSCSEG00000020434	xrcc6	100	82.787	Cynoglossus_semilaevis
ENSSLDG00000009974	xrcc6	100	84.262	ENSCVAG00000002189	xrcc6	100	84.262	Cyprinodon_variegatus
ENSSLDG00000009974	xrcc6	99	75.698	ENSDARG00000071551	xrcc6	99	75.369	Danio_rerio
ENSSLDG00000009974	xrcc6	78	52.415	ENSETEG00000015333	-	67	52.415	Echinops_telfairi
ENSSLDG00000009974	xrcc6	99	54.337	ENSEASG00005001514	XRCC6	99	54.337	Equus_asinus_asinus
ENSSLDG00000009974	xrcc6	99	54.664	ENSECAG00000017563	XRCC6	99	54.867	Equus_caballus
ENSSLDG00000009974	xrcc6	100	74.754	ENSELUG00000020301	xrcc6	100	74.754	Esox_lucius
ENSSLDG00000009974	xrcc6	99	57.398	ENSFALG00000011908	XRCC6	97	57.398	Ficedula_albicollis
ENSSLDG00000009974	xrcc6	100	86.230	ENSFHEG00000016833	xrcc6	100	86.230	Fundulus_heteroclitus
ENSSLDG00000009974	xrcc6	99	67.915	ENSGMOG00000013524	xrcc6	100	67.752	Gadus_morhua
ENSSLDG00000009974	xrcc6	99	57.861	ENSGALG00000011932	XRCC6	99	58.023	Gallus_gallus
ENSSLDG00000009974	xrcc6	100	82.623	ENSGAFG00000008130	xrcc6	100	82.623	Gambusia_affinis
ENSSLDG00000009974	xrcc6	99	85.668	ENSGACG00000004868	xrcc6	99	84.528	Gasterosteus_aculeatus
ENSSLDG00000009974	xrcc6	99	58.007	ENSGAGG00000017518	XRCC6	99	57.680	Gopherus_agassizii
ENSSLDG00000009974	xrcc6	99	55.556	ENSGGOG00000015885	XRCC6	96	58.772	Gorilla_gorilla
ENSSLDG00000009974	xrcc6	93	87.633	ENSHBUG00000023281	xrcc6	100	87.633	Haplochromis_burtoni
ENSSLDG00000009974	xrcc6	99	55.574	ENSHGLG00000018078	XRCC6	99	55.410	Heterocephalus_glaber_female
ENSSLDG00000009974	xrcc6	99	55.574	ENSHGLG00100011264	XRCC6	99	55.410	Heterocephalus_glaber_male
ENSSLDG00000009974	xrcc6	100	80.492	ENSHCOG00000009821	xrcc6	100	80.492	Hippocampus_comes
ENSSLDG00000009974	xrcc6	99	76.026	ENSIPUG00000000767	xrcc6	99	76.026	Ictalurus_punctatus
ENSSLDG00000009974	xrcc6	99	55.483	ENSSTOG00000009490	XRCC6	99	55.155	Ictidomys_tridecemlineatus
ENSSLDG00000009974	xrcc6	99	51.961	ENSJJAG00000017136	Xrcc6	99	52.614	Jaculus_jaculus
ENSSLDG00000009974	xrcc6	99	86.700	ENSKMAG00000002141	xrcc6	99	86.700	Kryptolebias_marmoratus
ENSSLDG00000009974	xrcc6	99	85.855	ENSLBEG00000002691	xrcc6	99	85.855	Labrus_bergylta
ENSSLDG00000009974	xrcc6	87	62.376	ENSLOCG00000011533	xrcc6	99	62.376	Lepisosteus_oculatus
ENSSLDG00000009974	xrcc6	99	55.556	ENSMFAG00000003352	XRCC6	99	55.719	Macaca_fascicularis
ENSSLDG00000009974	xrcc6	99	55.556	ENSMMUG00000001856	XRCC6	99	55.719	Macaca_mulatta
ENSSLDG00000009974	xrcc6	99	55.556	ENSMNEG00000035076	XRCC6	99	55.719	Macaca_nemestrina
ENSSLDG00000009974	xrcc6	99	55.556	ENSMLEG00000019869	XRCC6	99	55.719	Mandrillus_leucophaeus
ENSSLDG00000009974	xrcc6	96	85.009	ENSMAMG00000003405	xrcc6	97	84.983	Mastacembelus_armatus
ENSSLDG00000009974	xrcc6	100	85.270	ENSMAMG00000003368	xrcc6	100	85.270	Mastacembelus_armatus
ENSSLDG00000009974	xrcc6	100	87.705	ENSMZEG00005028080	xrcc6	100	87.705	Maylandia_zebra
ENSSLDG00000009974	xrcc6	99	57.699	ENSMGAG00000012146	XRCC6	99	57.861	Meleagris_gallopavo
ENSSLDG00000009974	xrcc6	99	55.738	ENSMAUG00000017340	Xrcc6	99	55.738	Mesocricetus_auratus
ENSSLDG00000009974	xrcc6	99	54.754	ENSMOCG00000015717	Xrcc6	99	54.918	Microtus_ochrogaster
ENSSLDG00000009974	xrcc6	99	84.934	ENSMMOG00000003536	xrcc6	99	84.934	Mola_mola
ENSSLDG00000009974	xrcc6	100	87.049	ENSMALG00000013912	xrcc6	95	87.049	Monopterus_albus
ENSSLDG00000009974	xrcc6	99	53.279	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	Mus_caroli
ENSSLDG00000009974	xrcc6	99	56.885	ENSMUSG00000022471	Xrcc6	99	59.316	Mus_musculus
ENSSLDG00000009974	xrcc6	99	56.557	MGP_PahariEiJ_G0020069	Xrcc6	99	56.557	Mus_pahari
ENSSLDG00000009974	xrcc6	96	57.192	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	Mus_spretus
ENSSLDG00000009974	xrcc6	99	55.082	ENSNGAG00000013750	Xrcc6	99	55.082	Nannospalax_galili
ENSSLDG00000009974	xrcc6	100	87.869	ENSNBRG00000004125	xrcc6	100	87.869	Neolamprologus_brichardi
ENSSLDG00000009974	xrcc6	96	56.336	ENSOPRG00000002386	XRCC6	99	56.336	Ochotona_princeps
ENSSLDG00000009974	xrcc6	99	55.155	ENSODEG00000015847	XRCC6	99	55.319	Octodon_degus
ENSSLDG00000009974	xrcc6	100	87.049	ENSONIG00000019715	xrcc6	100	87.049	Oreochromis_niloticus
ENSSLDG00000009974	xrcc6	68	59.375	ENSOANG00000011328	XRCC6	99	59.375	Ornithorhynchus_anatinus
ENSSLDG00000009974	xrcc6	99	54.828	ENSOCUG00000006948	XRCC6	99	54.828	Oryctolagus_cuniculus
ENSSLDG00000009974	xrcc6	100	83.306	ENSORLG00020007820	xrcc6	100	83.306	Oryzias_latipes_hni
ENSSLDG00000009974	xrcc6	100	82.979	ENSORLG00015006406	xrcc6	100	82.979	Oryzias_latipes_hsok
ENSSLDG00000009974	xrcc6	100	84.615	ENSOMEG00000008998	xrcc6	100	84.615	Oryzias_melastigma
ENSSLDG00000009974	xrcc6	99	55.483	ENSOGAG00000008821	XRCC6	99	55.155	Otolemur_garnettii
ENSSLDG00000009974	xrcc6	92	55.946	ENSPPAG00000037167	XRCC6	99	55.946	Pan_paniscus
ENSSLDG00000009974	xrcc6	99	55.556	ENSPTRG00000022548	XRCC6	99	56.336	Pan_troglodytes
ENSSLDG00000009974	xrcc6	99	55.556	ENSPTRG00000045824	XRCC6	99	56.336	Pan_troglodytes
ENSSLDG00000009974	xrcc6	99	55.392	ENSPANG00000001252	XRCC6	99	59.052	Papio_anubis
ENSSLDG00000009974	xrcc6	99	71.217	ENSPKIG00000003974	xrcc6	99	71.217	Paramormyrops_kingsleyae
ENSSLDG00000009974	xrcc6	99	81.561	ENSPMGG00000014220	xrcc6	100	81.728	Periophthalmus_magnuspinnatus
ENSSLDG00000009974	xrcc6	99	55.082	ENSPEMG00000023446	Xrcc6	99	55.082	Peromyscus_maniculatus_bairdii
ENSSLDG00000009974	xrcc6	99	57.353	ENSPCIG00000026409	XRCC6	99	57.190	Phascolarctos_cinereus
ENSSLDG00000009974	xrcc6	100	85.574	ENSPFOG00000017173	xrcc6	100	85.574	Poecilia_formosa
ENSSLDG00000009974	xrcc6	100	85.246	ENSPLAG00000000562	xrcc6	100	85.246	Poecilia_latipinna
ENSSLDG00000009974	xrcc6	100	85.574	ENSPMEG00000018478	xrcc6	100	85.574	Poecilia_mexicana
ENSSLDG00000009974	xrcc6	100	85.294	ENSPREG00000020957	xrcc6	93	85.294	Poecilia_reticulata
ENSSLDG00000009974	xrcc6	99	48.203	ENSPPYG00000011876	XRCC6	99	48.366	Pongo_abelii
ENSSLDG00000009974	xrcc6	99	55.082	ENSPVAG00000001168	XRCC6	99	54.590	Pteropus_vampyrus
ENSSLDG00000009974	xrcc6	100	87.869	ENSPNYG00000003815	xrcc6	100	83.619	Pundamilia_nyererei
ENSSLDG00000009974	xrcc6	99	55.738	ENSRNOG00000006392	Xrcc6	99	55.902	Rattus_norvegicus
ENSSLDG00000009974	xrcc6	99	51.471	ENSRBIG00000039794	XRCC6	99	52.659	Rhinopithecus_bieti
ENSSLDG00000009974	xrcc6	99	55.556	ENSRROG00000030297	XRCC6	99	55.719	Rhinopithecus_roxellana
ENSSLDG00000009974	xrcc6	67	51.589	ENSSBOG00000024724	-	99	51.589	Saimiri_boliviensis_boliviensis
ENSSLDG00000009974	xrcc6	99	56.536	ENSSHAG00000010790	XRCC6	99	56.373	Sarcophilus_harrisii
ENSSLDG00000009974	xrcc6	99	73.399	ENSSFOG00015014409	xrcc6	99	73.520	Scleropages_formosus
ENSSLDG00000009974	xrcc6	100	90.492	ENSSMAG00000006496	xrcc6	100	90.492	Scophthalmus_maximus
ENSSLDG00000009974	xrcc6	100	98.689	ENSSDUG00000007542	xrcc6	100	98.689	Seriola_dumerili
ENSSLDG00000009974	xrcc6	99	58.007	ENSSPUG00000012086	XRCC6	99	58.170	Sphenodon_punctatus
ENSSLDG00000009974	xrcc6	100	88.197	ENSSPAG00000015199	xrcc6	100	88.197	Stegastes_partitus
ENSSLDG00000009974	xrcc6	96	58.603	ENSTGUG00000009852	-	95	58.532	Taeniopygia_guttata
ENSSLDG00000009974	xrcc6	99	79.310	ENSTRUG00000017070	xrcc6	99	79.803	Takifugu_rubripes
ENSSLDG00000009974	xrcc6	96	77.496	ENSTNIG00000012947	xrcc6	99	77.496	Tetraodon_nigroviridis
ENSSLDG00000009974	xrcc6	96	51.884	ENSTBEG00000011736	XRCC6	99	51.884	Tupaia_belangeri
ENSSLDG00000009974	xrcc6	99	46.458	ENSTTRG00000006749	XRCC6	99	46.623	Tursiops_truncatus
ENSSLDG00000009974	xrcc6	100	84.754	ENSXMAG00000009691	xrcc6	100	84.754	Xiphophorus_maculatus