EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000010056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 10973 bases
Position: chrPEQF01098520.1:118943-129915
Accession: 111652579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012661	RRM_1	PF00076.22	1.2e-24	1	1
ENSSLDP00000012647	RRM_1	PF00076.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013121	-	1846	XM_023402881	ENSSLDP00000012661	492 (aa)	XP_023258649	UPI000C6F8B68
ENSSLDT00000013107	-	1906	XM_023402878	ENSSLDP00000012647	512 (aa)	XP_023258646	UPI000C6F588C

Gene Model

Click here to download ENSSLDG00000010056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010056	-	62	52.367	ENSCJAG00000039083	-	51	70.769	Callithrix_jacchus
ENSSLDG00000010056	-	58	54.848	ENSCJAG00000011554	-	52	73.980	Callithrix_jacchus
ENSSLDG00000010056	-	97	55.911	ENSTSYG00000007750	CSTF2T	80	91.327	Carlito_syrichta
ENSSLDG00000010056	-	58	55.723	ENSCATG00000041868	-	51	74.490	Cercocebus_atys
ENSSLDG00000010056	-	96	73.347	ENSCSEG00000002596	-	100	72.937	Cynoglossus_semilaevis
ENSSLDG00000010056	-	96	52.301	ENSEBUG00000014295	CSTF2T	98	51.566	Eptatretus_burgeri
ENSSLDG00000010056	-	95	81.579	ENSELUG00000004079	-	97	82.186	Esox_lucius
ENSSLDG00000010056	-	50	89.055	ENSFDAG00000021170	CSTF2T	64	91.327	Fukomys_damarensis
ENSSLDG00000010056	-	97	56.748	ENSGGOG00000042388	-	83	83.111	Gorilla_gorilla
ENSSLDG00000010056	-	97	56.748	ENSGGOG00000036416	-	83	83.111	Gorilla_gorilla
ENSSLDG00000010056	-	85	89.552	ENSSTOG00000026303	CSTF2T	82	83.111	Ictidomys_tridecemlineatus
ENSSLDG00000010056	-	80	66.024	ENSJJAG00000019881	Cstf2t	73	65.728	Jaculus_jaculus
ENSSLDG00000010056	-	96	61.255	ENSLAFG00000002058	CSTF2T	99	58.984	Loxodonta_africana
ENSSLDG00000010056	-	58	55.255	ENSMMUG00000042906	-	58	68.000	Macaca_mulatta
ENSSLDG00000010056	-	97	55.751	ENSMAUG00000006359	Cstf2t	79	91.327	Mesocricetus_auratus
ENSSLDG00000010056	-	97	74.286	ENSMICG00000030551	-	80	83.111	Microcebus_murinus
ENSSLDG00000010056	-	81	89.552	ENSMICG00000000867	-	83	83.111	Microcebus_murinus
ENSSLDG00000010056	-	96	95.551	ENSMALG00000008842	-	98	95.551	Monopterus_albus
ENSSLDG00000010056	-	96	85.455	MGP_CAROLIEiJ_G0022872	Cstf2t	80	90.863	Mus_caroli
ENSSLDG00000010056	-	97	56.019	ENSMPUG00000020141	CSTF2T	82	83.111	Mustela_putorius_furo
ENSSLDG00000010056	-	96	52.970	ENSMLUG00000027140	-	77	85.641	Myotis_lucifugus
ENSSLDG00000010056	-	85	89.552	ENSNGAG00000003304	Cstf2t	79	91.327	Nannospalax_galili
ENSSLDG00000010056	-	97	56.699	ENSODEG00000012386	CSTF2T	74	91.327	Octodon_degus
ENSSLDG00000010056	-	97	56.557	ENSOGAG00000014565	CSTF2T	81	91.327	Otolemur_garnettii
ENSSLDG00000010056	-	97	55.128	ENSPTIG00000021145	CSTF2T	83	82.743	Panthera_tigris_altaica
ENSSLDG00000010056	-	96	94.118	ENSPFOG00000016756	CSTF2T	94	90.909	Poecilia_formosa
ENSSLDG00000010056	-	96	55.682	ENSPCOG00000010982	CSTF2T	83	82.743	Propithecus_coquereli
ENSSLDG00000010056	-	97	55.935	ENSPVAG00000006274	CSTF2T	81	91.327	Pteropus_vampyrus
ENSSLDG00000010056	-	97	56.774	ENSRBIG00000029324	CSTF2T	81	83.111	Rhinopithecus_bieti
ENSSLDG00000010056	-	97	56.613	ENSRROG00000042507	CSTF2T	81	83.111	Rhinopithecus_roxellana
ENSSLDG00000010056	-	97	55.574	ENSSBOG00000022638	CSTF2T	80	91.327	Saimiri_boliviensis_boliviensis
ENSSLDG00000010056	-	100	99.805	ENSSDUG00000001049	-	100	99.805	Seriola_dumerili
ENSSLDG00000010056	-	80	90.404	ENSSARG00000002013	-	68	90.816	Sorex_araneus
ENSSLDG00000010056	-	96	94.915	ENSSPAG00000009247	-	96	94.915	Stegastes_partitus
ENSSLDG00000010056	-	97	54.777	ENSSSCG00000010430	CSTF2T	83	83.111	Sus_scrofa
ENSSLDG00000010056	-	95	88.075	ENSTRUG00000004323	-	96	85.565	Takifugu_rubripes
ENSSLDG00000010056	-	68	86.000	ENSVVUG00000002575	CSTF2T	99	55.556	Vulpes_vulpes