EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000010295 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3771 bases
Position: chrPEQF01099374.1:29248-33018
Accession: 111672189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000012936	MBD	PF01429.19	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013410	MBD4-201	2292	XM_023429523	ENSSLDP00000012936	467 (aa)	XP_023285291	-
ENSSLDT00000013428	MBD4-202	525	-	ENSSLDP00000012955	174 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000010295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010295	MBD4	89	64.920	ENSAPOG00000021668	mbd4	91	64.920	Acanthochromis_polyacanthus
ENSSLDG00000010295	MBD4	86	68.246	ENSAOCG00000001157	mbd4	91	66.133	Amphiprion_ocellaris
ENSSLDG00000010295	MBD4	86	68.246	ENSAPEG00000016131	mbd4	91	66.133	Amphiprion_percula
ENSSLDG00000010295	MBD4	87	69.159	ENSATEG00000014594	MBD4	81	69.159	Anabas_testudineus
ENSSLDG00000010295	MBD4	61	59.677	ENSAMXG00000017271	mbd4	69	59.677	Astyanax_mexicanus
ENSSLDG00000010295	MBD4	83	36.323	ENSCHIG00000009760	MBD4	77	36.323	Capra_hircus
ENSSLDG00000010295	MBD4	81	39.198	ENSCLAG00000008974	MBD4	78	39.198	Chinchilla_lanigera
ENSSLDG00000010295	MBD4	51	54.545	ENSDORG00000000902	-	51	54.545	Dipodomys_ordii
ENSSLDG00000010295	MBD4	82	34.307	ENSEBUG00000010816	mbd4	87	34.307	Eptatretus_burgeri
ENSSLDG00000010295	MBD4	83	45.805	ENSELUG00000018483	MBD4	74	45.598	Esox_lucius
ENSSLDG00000010295	MBD4	80	47.017	ENSGMOG00000013830	mbd4	88	47.017	Gadus_morhua
ENSSLDG00000010295	MBD4	80	59.439	ENSGAFG00000016011	mbd4	85	59.949	Gambusia_affinis
ENSSLDG00000010295	MBD4	87	50.000	ENSGACG00000001970	-	87	50.000	Gasterosteus_aculeatus
ENSSLDG00000010295	MBD4	81	37.585	ENSSTOG00000020663	MBD4	76	37.585	Ictidomys_tridecemlineatus
ENSSLDG00000010295	MBD4	80	57.568	ENSKMAG00000015015	mbd4	85	59.553	Kryptolebias_marmoratus
ENSSLDG00000010295	MBD4	87	59.397	ENSLBEG00000005669	MBD4	81	59.397	Labrus_bergylta
ENSSLDG00000010295	MBD4	66	50.909	ENSLOCG00000013054	MBD4	88	39.301	Lepisosteus_oculatus
ENSSLDG00000010295	MBD4	63	63.175	ENSMAMG00000024084	-	85	63.175	Mastacembelus_armatus
ENSSLDG00000010295	MBD4	81	38.940	ENSMODG00000006399	-	88	38.940	Monodelphis_domestica
ENSSLDG00000010295	MBD4	87	69.425	ENSMALG00000021517	mbd4	82	69.425	Monopterus_albus
ENSSLDG00000010295	MBD4	80	40.367	ENSMUSG00000030322	Mbd4	77	40.367	Mus_musculus
ENSSLDG00000010295	MBD4	80	39.450	MGP_PahariEiJ_G0022511	-	76	39.450	Mus_pahari
ENSSLDG00000010295	MBD4	80	40.698	MGP_SPRETEiJ_G0029788	Mbd4	76	40.698	Mus_spretus
ENSSLDG00000010295	MBD4	67	75.221	ENSOPRG00000000473	MBD4	54	75.221	Ochotona_princeps
ENSSLDG00000010295	MBD4	80	65.848	ENSONIG00000017212	mbd4	87	65.848	Oreochromis_niloticus
ENSSLDG00000010295	MBD4	81	55.584	ENSORLG00000011049	mbd4	85	55.584	Oryzias_latipes
ENSSLDG00000010295	MBD4	81	56.091	ENSORLG00020020013	mbd4	87	55.335	Oryzias_latipes_hni
ENSSLDG00000010295	MBD4	81	55.584	ENSORLG00015015342	mbd4	85	55.584	Oryzias_latipes_hsok
ENSSLDG00000010295	MBD4	85	57.598	ENSOMEG00000008819	mbd4	82	57.598	Oryzias_melastigma
ENSSLDG00000010295	MBD4	83	36.323	ENSOARG00000014699	MBD4	77	36.323	Ovis_aries
ENSSLDG00000010295	MBD4	81	39.901	ENSPKIG00000012306	MBD4	65	39.901	Paramormyrops_kingsleyae
ENSSLDG00000010295	MBD4	80	39.535	ENSPEMG00000006226	Mbd4	82	40.000	Peromyscus_maniculatus_bairdii
ENSSLDG00000010295	MBD4	80	56.716	ENSPFOG00000014471	mbd4	85	57.606	Poecilia_formosa
ENSSLDG00000010295	MBD4	81	42.040	ENSSFOG00015016292	mbd4	83	42.040	Scleropages_formosus
ENSSLDG00000010295	MBD4	87	69.860	ENSSMAG00000013958	-	64	70.093	Scophthalmus_maximus
ENSSLDG00000010295	MBD4	87	96.560	ENSSDUG00000001365	mbd4	88	96.560	Seriola_dumerili
ENSSLDG00000010295	MBD4	68	79.646	ENSSPUG00000017344	MBD4	56	79.646	Sphenodon_punctatus
ENSSLDG00000010295	MBD4	86	56.563	ENSTRUG00000010124	mbd4	87	56.563	Takifugu_rubripes
ENSSLDG00000010295	MBD4	80	52.195	ENSTNIG00000017927	mbd4	87	52.195	Tetraodon_nigroviridis
ENSSLDG00000010295	MBD4	80	38.660	ENSXETG00000026622	mbd4	76	38.660	Xenopus_tropicalis
ENSSLDG00000010295	MBD4	80	60.102	ENSXMAG00000021129	mbd4	85	60.102	Xiphophorus_maculatus