EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010342 (Gene tree)
Gene ID: -
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11184 bases
Position: chrPEQF01099452.1:493705-504888
Accession: 111646804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013027	RRM_1	PF00076.22	1.5e-08	1	1
ENSSLDP00000013065	PWI	PF01480.17	1.1e-13	1	1
ENSSLDP00000013027	PWI	PF01480.17	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013543	-	2460	-	ENSSLDP00000013065	819 (aa)	-	-
ENSSLDT00000013501	-	3944	XM_023396349	ENSSLDP00000013027	825 (aa)	XP_023252117	UPI000C6F7516

Gene Model

Click here to download ENSSLDG00000010342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010342	rbm25a	56	78.571	ENSSLDG00000024573	rbm25b	98	79.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010342	rbm25a	57	97.447	ENSAPOG00000017757	rbm25a	57	97.441	Acanthochromis_polyacanthus
ENSSLDG00000010342	rbm25a	57	77.612	ENSAPOG00000015321	rbm25b	56	79.386	Acanthochromis_polyacanthus
ENSSLDG00000010342	rbm25a	58	93.008	ENSACIG00000019482	rbm25a	57	93.390	Amphilophus_citrinellus
ENSSLDG00000010342	rbm25a	57	73.529	ENSACIG00000014178	rbm25b	55	74.242	Amphilophus_citrinellus
ENSSLDG00000010342	rbm25a	58	74.207	ENSAOCG00000019308	rbm25b	55	73.523	Amphiprion_ocellaris
ENSSLDG00000010342	rbm25a	54	96.197	ENSAOCG00000013695	rbm25a	55	96.171	Amphiprion_ocellaris
ENSSLDG00000010342	rbm25a	58	77.778	ENSAPEG00000009666	rbm25b	58	79.386	Amphiprion_percula
ENSSLDG00000010342	rbm25a	100	92.892	ENSAPEG00000007514	rbm25a	57	96.406	Amphiprion_percula
ENSSLDG00000010342	rbm25a	59	76.091	ENSATEG00000017312	rbm25b	55	79.167	Anabas_testudineus
ENSSLDG00000010342	rbm25a	100	96.970	ENSATEG00000020676	rbm25a	100	96.970	Anabas_testudineus
ENSSLDG00000010342	rbm25a	100	79.216	ENSACLG00000027482	rbm25a	85	88.987	Astatotilapia_calliptera
ENSSLDG00000010342	rbm25a	57	78.858	ENSACLG00000024359	rbm25b	55	80.525	Astatotilapia_calliptera
ENSSLDG00000010342	rbm25a	52	76.168	ENSAMXG00000024525	rbm25b	52	76.798	Astyanax_mexicanus
ENSSLDG00000010342	rbm25a	54	34.298	WBGene00012245	W04D2.6	81	33.114	Caenorhabditis_elegans
ENSSLDG00000010342	rbm25a	64	86.486	ENSCHOG00000008903	RBM25	63	86.301	Choloepus_hoffmanni
ENSSLDG00000010342	rbm25a	59	73.608	ENSCSEG00000020737	rbm25b	56	75.764	Cynoglossus_semilaevis
ENSSLDG00000010342	rbm25a	56	89.254	ENSCSEG00000009430	rbm25a	56	89.427	Cynoglossus_semilaevis
ENSSLDG00000010342	rbm25a	58	73.878	ENSCVAG00000003478	rbm25b	55	77.074	Cyprinodon_variegatus
ENSSLDG00000010342	rbm25a	58	80.739	ENSCVAG00000005498	rbm25a	99	83.715	Cyprinodon_variegatus
ENSSLDG00000010342	rbm25a	63	78.967	ENSDARG00000006395	rbm25b	55	74.730	Danio_rerio
ENSSLDG00000010342	rbm25a	53	67.426	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSSLDG00000010342	rbm25a	87	71.552	FBgn0028474	CG4119	67	73.874	Drosophila_melanogaster
ENSSLDG00000010342	rbm25a	57	69.978	ENSELUG00000021847	rbm25a	51	69.383	Esox_lucius
ENSSLDG00000010342	rbm25a	57	72.822	ENSELUG00000007730	rbm25b	56	75.803	Esox_lucius
ENSSLDG00000010342	rbm25a	100	82.420	ENSFHEG00000005318	rbm25a	60	82.081	Fundulus_heteroclitus
ENSSLDG00000010342	rbm25a	58	77.871	ENSFHEG00000003513	rbm25b	56	80.131	Fundulus_heteroclitus
ENSSLDG00000010342	rbm25a	82	74.894	ENSGMOG00000014070	rbm25a	63	87.059	Gadus_morhua
ENSSLDG00000010342	rbm25a	98	72.447	ENSGAFG00000001092	rbm25b	50	79.870	Gambusia_affinis
ENSSLDG00000010342	rbm25a	100	83.740	ENSGAFG00000018036	rbm25a	54	84.902	Gambusia_affinis
ENSSLDG00000010342	rbm25a	56	93.846	ENSHBUG00000016908	rbm25a	57	93.590	Haplochromis_burtoni
ENSSLDG00000010342	rbm25a	57	79.070	ENSHBUG00000018499	rbm25b	55	80.744	Haplochromis_burtoni
ENSSLDG00000010342	rbm25a	87	68.499	ENSHCOG00000018433	rbm25a	56	77.241	Hippocampus_comes
ENSSLDG00000010342	rbm25a	100	68.765	ENSHCOG00000000142	rbm25b	55	74.091	Hippocampus_comes
ENSSLDG00000010342	rbm25a	56	78.879	ENSKMAG00000018826	rbm25b	55	79.476	Kryptolebias_marmoratus
ENSSLDG00000010342	rbm25a	58	81.200	ENSKMAG00000016242	rbm25a	91	85.714	Kryptolebias_marmoratus
ENSSLDG00000010342	rbm25a	100	72.879	ENSLBEG00000010667	rbm25b	56	78.186	Labrus_bergylta
ENSSLDG00000010342	rbm25a	63	75.895	ENSLACG00000011845	RBM25	51	74.449	Latimeria_chalumnae
ENSSLDG00000010342	rbm25a	57	78.361	ENSMAMG00000004524	rbm25b	55	79.736	Mastacembelus_armatus
ENSSLDG00000010342	rbm25a	57	82.516	ENSMAMG00000000165	rbm25a	51	88.679	Mastacembelus_armatus
ENSSLDG00000010342	rbm25a	56	93.846	ENSMZEG00005011183	rbm25a	57	93.590	Maylandia_zebra
ENSSLDG00000010342	rbm25a	57	78.858	ENSMZEG00005001453	rbm25b	55	80.525	Maylandia_zebra
ENSSLDG00000010342	rbm25a	57	89.316	ENSMMOG00000009065	rbm25a	56	88.889	Mola_mola
ENSSLDG00000010342	rbm25a	58	77.640	ENSMALG00000020441	rbm25b	86	79.956	Monopterus_albus
ENSSLDG00000010342	rbm25a	56	93.626	ENSNBRG00000003761	rbm25a	57	93.376	Neolamprologus_brichardi
ENSSLDG00000010342	rbm25a	100	62.245	ENSOCUG00000013737	RBM25	83	74.614	Oryctolagus_cuniculus
ENSSLDG00000010342	rbm25a	57	76.409	ENSORLG00000011874	rbm25b	55	78.166	Oryzias_latipes
ENSSLDG00000010342	rbm25a	57	76.409	ENSORLG00020016422	rbm25b	55	78.118	Oryzias_latipes_hni
ENSSLDG00000010342	rbm25a	72	82.482	ENSORLG00015022499	rbm25a	52	76.011	Oryzias_latipes_hsok
ENSSLDG00000010342	rbm25a	57	76.715	ENSORLG00015011269	rbm25b	55	78.821	Oryzias_latipes_hsok
ENSSLDG00000010342	rbm25a	53	84.889	ENSOMEG00000022138	rbm25a	59	85.246	Oryzias_melastigma
ENSSLDG00000010342	rbm25a	58	75.579	ENSOMEG00000023172	rbm25b	55	78.289	Oryzias_melastigma
ENSSLDG00000010342	rbm25a	58	78.661	ENSPKIG00000003203	rbm25b	95	73.343	Paramormyrops_kingsleyae
ENSSLDG00000010342	rbm25a	54	70.814	ENSPMGG00000001791	rbm25a	100	71.041	Periophthalmus_magnuspinnatus
ENSSLDG00000010342	rbm25a	58	76.749	ENSPMGG00000015740	rbm25b	56	77.489	Periophthalmus_magnuspinnatus
ENSSLDG00000010342	rbm25a	58	77.801	ENSPFOG00000018808	rbm25b	55	79.826	Poecilia_formosa
ENSSLDG00000010342	rbm25a	100	83.352	ENSPFOG00000017931	rbm25a	91	87.912	Poecilia_formosa
ENSSLDG00000010342	rbm25a	100	83.797	ENSPLAG00000018338	rbm25a	91	87.912	Poecilia_latipinna
ENSSLDG00000010342	rbm25a	58	77.593	ENSPMEG00000019161	rbm25b	55	79.826	Poecilia_mexicana
ENSSLDG00000010342	rbm25a	100	83.676	ENSPMEG00000024470	rbm25a	91	87.912	Poecilia_mexicana
ENSSLDG00000010342	rbm25a	58	77.893	ENSPREG00000008522	rbm25b	55	80.130	Poecilia_reticulata
ENSSLDG00000010342	rbm25a	100	84.746	ENSPREG00000009228	rbm25a	91	87.912	Poecilia_reticulata
ENSSLDG00000010342	rbm25a	51	77.473	ENSPCAG00000006226	RBM25	77	75.385	Procavia_capensis
ENSSLDG00000010342	rbm25a	56	88.503	ENSPNYG00000022596	rbm25a	53	88.987	Pundamilia_nyererei
ENSSLDG00000010342	rbm25a	58	71.399	ENSPNAG00000012024	rbm25b	55	77.342	Pygocentrus_nattereri
ENSSLDG00000010342	rbm25a	57	79.873	ENSSFOG00015007093	rbm25	57	80.085	Scleropages_formosus
ENSSLDG00000010342	rbm25a	57	95.106	ENSSMAG00000009745	rbm25a	58	95.106	Scophthalmus_maximus
ENSSLDG00000010342	rbm25a	58	74.433	ENSSMAG00000002520	rbm25b	57	76.068	Scophthalmus_maximus
ENSSLDG00000010342	rbm25a	100	99.879	ENSSDUG00000017984	rbm25a	100	99.879	Seriola_dumerili
ENSSLDG00000010342	rbm25a	100	95.227	ENSSPAG00000011114	rbm25a	100	95.227	Stegastes_partitus
ENSSLDG00000010342	rbm25a	58	77.254	ENSSPAG00000016168	rbm25b	56	79.650	Stegastes_partitus
ENSSLDG00000010342	rbm25a	57	75.574	ENSTRUG00000017964	rbm25b	56	77.657	Takifugu_rubripes
ENSSLDG00000010342	rbm25a	57	84.335	ENSTRUG00000003076	rbm25a	59	83.956	Takifugu_rubripes
ENSSLDG00000010342	rbm25a	62	79.808	ENSTBEG00000010538	-	67	79.808	Tupaia_belangeri
ENSSLDG00000010342	rbm25a	53	73.000	ENSVPAG00000009052	RBM25	77	74.945	Vicugna_pacos
ENSSLDG00000010342	rbm25a	100	83.234	ENSXCOG00000004043	RBM25	54	84.902	Xiphophorus_couchianus
ENSSLDG00000010342	rbm25a	100	68.383	ENSXCOG00000002222	rbm25b	53	71.711	Xiphophorus_couchianus
ENSSLDG00000010342	rbm25a	100	84.204	ENSXMAG00000009077	RBM25	59	84.127	Xiphophorus_maculatus
ENSSLDG00000010342	rbm25a	100	73.728	ENSXMAG00000017290	rbm25b	55	79.785	Xiphophorus_maculatus