EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010380 (Gene tree)
Gene ID: -
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9135 bases
Position: chrPEQF01099085.1:2968888-2978022
Accession: 111664854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013137	DBP10CT	PF08147.12	5.4e-16	1	1
ENSSLDP00000013102	DBP10CT	PF08147.12	6.3e-16	1	1
ENSSLDP00000013102	DEAD	PF00270.29	3.2e-50	1	1
ENSSLDP00000013137	DEAD	PF00270.29	1.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013579	-	4609	XM_023419643	ENSSLDP00000013102	871 (aa)	XP_023275411	UPI000C6F53C1
ENSSLDT00000013617	-	2511	-	ENSSLDP00000013137	836 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000010380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010380	ddx54	53	32.159	ENSSLDG00000003692	ddx18	75	32.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010380	ddx54	98	59.379	ENSG00000123064	DDX54	100	86.538	Homo_sapiens
ENSSLDG00000010380	ddx54	98	84.901	ENSAPOG00000008602	ddx54	98	85.250	Acanthochromis_polyacanthus
ENSSLDG00000010380	ddx54	98	59.793	ENSAMEG00000008775	DDX54	93	59.431	Ailuropoda_melanoleuca
ENSSLDG00000010380	ddx54	100	81.900	ENSACIG00000019104	ddx54	98	81.452	Amphilophus_citrinellus
ENSSLDG00000010380	ddx54	98	83.972	ENSAOCG00000008449	ddx54	98	84.088	Amphiprion_ocellaris
ENSSLDG00000010380	ddx54	98	83.972	ENSAPEG00000014287	ddx54	98	84.088	Amphiprion_percula
ENSSLDG00000010380	ddx54	100	84.247	ENSATEG00000018529	ddx54	98	84.070	Anabas_testudineus
ENSSLDG00000010380	ddx54	95	61.859	ENSAPLG00000013191	DDX54	98	61.783	Anas_platyrhynchos
ENSSLDG00000010380	ddx54	97	62.928	ENSACAG00000004703	DDX54	96	62.275	Anolis_carolinensis
ENSSLDG00000010380	ddx54	91	52.428	ENSANAG00000032241	-	85	56.324	Aotus_nancymaae
ENSSLDG00000010380	ddx54	99	51.508	ENSANAG00000032761	-	94	50.466	Aotus_nancymaae
ENSSLDG00000010380	ddx54	100	83.181	ENSACLG00000013176	ddx54	98	82.984	Astatotilapia_calliptera
ENSSLDG00000010380	ddx54	100	75.427	ENSAMXG00000009189	ddx54	98	75.435	Astyanax_mexicanus
ENSSLDG00000010380	ddx54	98	59.132	ENSBTAG00000011930	DDX54	89	59.302	Bos_taurus
ENSSLDG00000010380	ddx54	90	45.108	WBGene00022378	Y94H6A.5	94	45.264	Caenorhabditis_elegans
ENSSLDG00000010380	ddx54	85	62.978	ENSCJAG00000010039	DDX54	82	62.500	Callithrix_jacchus
ENSSLDG00000010380	ddx54	67	52.182	ENSCAFG00000009029	DDX54	97	51.180	Canis_familiaris
ENSSLDG00000010380	ddx54	100	59.035	ENSCAFG00020017643	DDX54	96	59.122	Canis_lupus_dingo
ENSSLDG00000010380	ddx54	98	58.824	ENSCHIG00000026798	DDX54	95	58.042	Capra_hircus
ENSSLDG00000010380	ddx54	95	56.923	ENSTSYG00000007898	DDX54	92	56.106	Carlito_syrichta
ENSSLDG00000010380	ddx54	95	60.072	ENSCAPG00000001482	DDX54	94	59.148	Cavia_aperea
ENSSLDG00000010380	ddx54	98	59.285	ENSCPOG00000020649	DDX54	94	59.364	Cavia_porcellus
ENSSLDG00000010380	ddx54	98	58.837	ENSCCAG00000022625	DDX54	96	58.783	Cebus_capucinus
ENSSLDG00000010380	ddx54	98	58.381	ENSCATG00000041943	DDX54	95	58.701	Cercocebus_atys
ENSSLDG00000010380	ddx54	100	59.318	ENSCLAG00000010748	DDX54	96	58.653	Chinchilla_lanigera
ENSSLDG00000010380	ddx54	95	58.726	ENSCSAG00000002432	DDX54	88	59.014	Chlorocebus_sabaeus
ENSSLDG00000010380	ddx54	78	61.890	ENSCPBG00000017982	DDX54	83	61.755	Chrysemys_picta_bellii
ENSSLDG00000010380	ddx54	89	54.278	ENSCING00000004789	-	95	52.334	Ciona_intestinalis
ENSSLDG00000010380	ddx54	88	53.024	ENSCSAVG00000008916	-	98	69.880	Ciona_savignyi
ENSSLDG00000010380	ddx54	90	84.681	ENSCANG00000020637	DDX54	97	84.681	Colobus_angolensis_palliatus
ENSSLDG00000010380	ddx54	100	58.408	ENSCGRG00001014803	Ddx54	95	58.411	Cricetulus_griseus_chok1gshd
ENSSLDG00000010380	ddx54	100	58.231	ENSCGRG00000002827	Ddx54	95	58.275	Cricetulus_griseus_crigri
ENSSLDG00000010380	ddx54	98	81.585	ENSCSEG00000016462	ddx54	98	81.585	Cynoglossus_semilaevis
ENSSLDG00000010380	ddx54	100	81.756	ENSCVAG00000022404	ddx54	98	81.417	Cyprinodon_variegatus
ENSSLDG00000010380	ddx54	100	73.523	ENSDARG00000105286	ddx54	98	72.917	Danio_rerio
ENSSLDG00000010380	ddx54	98	59.101	ENSDNOG00000032913	DDX54	95	59.277	Dasypus_novemcinctus
ENSSLDG00000010380	ddx54	83	55.413	ENSDORG00000003399	Ddx54	93	55.213	Dipodomys_ordii
ENSSLDG00000010380	ddx54	79	46.250	FBgn0052344	CG32344	88	43.931	Drosophila_melanogaster
ENSSLDG00000010380	ddx54	76	59.165	ENSEBUG00000008886	ddx54	94	59.165	Eptatretus_burgeri
ENSSLDG00000010380	ddx54	89	58.344	ENSEASG00005009501	DDX54	98	54.580	Equus_asinus_asinus
ENSSLDG00000010380	ddx54	98	59.400	ENSECAG00000012890	DDX54	96	59.179	Equus_caballus
ENSSLDG00000010380	ddx54	62	86.076	ENSEEUG00000008296	-	57	86.076	Erinaceus_europaeus
ENSSLDG00000010380	ddx54	100	77.727	ENSELUG00000013533	ddx54	98	76.843	Esox_lucius
ENSSLDG00000010380	ddx54	98	58.449	ENSFCAG00000027806	DDX54	96	58.324	Felis_catus
ENSSLDG00000010380	ddx54	93	63.872	ENSFALG00000007737	DDX54	98	63.763	Ficedula_albicollis
ENSSLDG00000010380	ddx54	88	74.478	ENSFDAG00000019953	DDX54	92	74.478	Fukomys_damarensis
ENSSLDG00000010380	ddx54	100	82.192	ENSFHEG00000018425	ddx54	98	81.628	Fundulus_heteroclitus
ENSSLDG00000010380	ddx54	96	75.740	ENSGMOG00000011746	ddx54	100	75.236	Gadus_morhua
ENSSLDG00000010380	ddx54	95	63.114	ENSGALG00000007490	DDX54	95	62.805	Gallus_gallus
ENSSLDG00000010380	ddx54	100	78.440	ENSGAFG00000010336	ddx54	98	78.271	Gambusia_affinis
ENSSLDG00000010380	ddx54	100	79.888	ENSGACG00000016793	ddx54	98	80.435	Gasterosteus_aculeatus
ENSSLDG00000010380	ddx54	95	64.320	ENSGAGG00000022803	DDX54	98	64.103	Gopherus_agassizii
ENSSLDG00000010380	ddx54	98	59.264	ENSGGOG00000010414	DDX54	96	57.919	Gorilla_gorilla
ENSSLDG00000010380	ddx54	98	60.255	ENSHGLG00000014411	DDX54	94	59.479	Heterocephalus_glaber_female
ENSSLDG00000010380	ddx54	98	60.325	ENSHGLG00100018511	DDX54	94	58.989	Heterocephalus_glaber_male
ENSSLDG00000010380	ddx54	100	80.229	ENSHCOG00000019287	ddx54	98	80.326	Hippocampus_comes
ENSSLDG00000010380	ddx54	100	72.994	ENSIPUG00000015556	Ddx54	98	73.303	Ictalurus_punctatus
ENSSLDG00000010380	ddx54	89	59.176	ENSSTOG00000004068	DDX54	98	58.044	Ictidomys_tridecemlineatus
ENSSLDG00000010380	ddx54	98	59.653	ENSJJAG00000015712	Ddx54	95	59.320	Jaculus_jaculus
ENSSLDG00000010380	ddx54	100	80.527	ENSKMAG00000017520	ddx54	98	80.280	Kryptolebias_marmoratus
ENSSLDG00000010380	ddx54	100	79.841	ENSLBEG00000019480	ddx54	98	79.585	Labrus_bergylta
ENSSLDG00000010380	ddx54	97	65.738	ENSLACG00000008944	DDX54	94	65.308	Latimeria_chalumnae
ENSSLDG00000010380	ddx54	100	71.918	ENSLOCG00000008485	ddx54	98	72.093	Lepisosteus_oculatus
ENSSLDG00000010380	ddx54	91	51.090	ENSLAFG00000027782	DDX54	98	50.124	Loxodonta_africana
ENSSLDG00000010380	ddx54	98	58.314	ENSMFAG00000043636	DDX54	96	58.743	Macaca_fascicularis
ENSSLDG00000010380	ddx54	98	58.314	ENSMMUG00000021795	DDX54	96	58.743	Macaca_mulatta
ENSSLDG00000010380	ddx54	98	52.620	ENSMNEG00000043605	DDX54	96	53.143	Macaca_nemestrina
ENSSLDG00000010380	ddx54	98	55.644	ENSMLEG00000038981	DDX54	94	55.981	Mandrillus_leucophaeus
ENSSLDG00000010380	ddx54	100	85.080	ENSMAMG00000012784	ddx54	98	85.035	Mastacembelus_armatus
ENSSLDG00000010380	ddx54	100	79.863	ENSMZEG00005018773	ddx54	98	79.604	Maylandia_zebra
ENSSLDG00000010380	ddx54	95	62.143	ENSMGAG00000009183	DDX54	98	61.800	Meleagris_gallopavo
ENSSLDG00000010380	ddx54	98	59.447	ENSMAUG00000011051	Ddx54	95	59.272	Mesocricetus_auratus
ENSSLDG00000010380	ddx54	100	58.090	ENSMICG00000012217	DDX54	96	58.295	Microcebus_murinus
ENSSLDG00000010380	ddx54	100	59.459	ENSMOCG00000010835	Ddx54	95	58.333	Microtus_ochrogaster
ENSSLDG00000010380	ddx54	98	80.420	ENSMMOG00000009634	ddx54	98	79.837	Mola_mola
ENSSLDG00000010380	ddx54	95	60.073	ENSMODG00000003413	DDX54	95	59.976	Monodelphis_domestica
ENSSLDG00000010380	ddx54	100	84.668	ENSMALG00000022098	ddx54	98	84.732	Monopterus_albus
ENSSLDG00000010380	ddx54	98	60.069	MGP_CAROLIEiJ_G0027665	Ddx54	95	60.070	Mus_caroli
ENSSLDG00000010380	ddx54	98	60.137	ENSMUSG00000029599	Ddx54	95	60.140	Mus_musculus
ENSSLDG00000010380	ddx54	98	59.516	MGP_PahariEiJ_G0024247	Ddx54	95	59.272	Mus_pahari
ENSSLDG00000010380	ddx54	98	59.886	MGP_SPRETEiJ_G0028665	Ddx54	95	59.884	Mus_spretus
ENSSLDG00000010380	ddx54	98	58.295	ENSMPUG00000002574	DDX54	96	58.593	Mustela_putorius_furo
ENSSLDG00000010380	ddx54	98	59.793	ENSNGAG00000021313	Ddx54	94	59.176	Nannospalax_galili
ENSSLDG00000010380	ddx54	71	91.872	ENSNBRG00000005588	ddx54	75	91.872	Neolamprologus_brichardi
ENSSLDG00000010380	ddx54	98	59.700	ENSNLEG00000000162	DDX54	94	59.670	Nomascus_leucogenys
ENSSLDG00000010380	ddx54	80	63.229	ENSMEUG00000015392	DDX54	99	63.796	Notamacropus_eugenii
ENSSLDG00000010380	ddx54	89	54.388	ENSOPRG00000012000	DDX54	84	53.878	Ochotona_princeps
ENSSLDG00000010380	ddx54	98	57.326	ENSODEG00000014863	DDX54	94	57.245	Octodon_degus
ENSSLDG00000010380	ddx54	98	57.666	ENSOCUG00000008932	DDX54	95	56.597	Oryctolagus_cuniculus
ENSSLDG00000010380	ddx54	100	79.314	ENSORLG00000007385	ddx54	98	79.162	Oryzias_latipes
ENSSLDG00000010380	ddx54	100	79.133	ENSORLG00020000858	ddx54	98	78.978	Oryzias_latipes_hni
ENSSLDG00000010380	ddx54	100	79.429	ENSORLG00015006956	ddx54	98	79.278	Oryzias_latipes_hsok
ENSSLDG00000010380	ddx54	98	80.445	ENSOMEG00000003663	ddx54	98	80.724	Oryzias_melastigma
ENSSLDG00000010380	ddx54	98	59.629	ENSOGAG00000004210	DDX54	94	59.479	Otolemur_garnettii
ENSSLDG00000010380	ddx54	98	59.127	ENSOARG00000008363	DDX54	95	58.810	Ovis_aries
ENSSLDG00000010380	ddx54	98	58.966	ENSPPAG00000042178	DDX54	96	58.581	Pan_paniscus
ENSSLDG00000010380	ddx54	98	56.214	ENSPPRG00000005223	DDX54	96	57.192	Panthera_pardus
ENSSLDG00000010380	ddx54	76	61.594	ENSPTIG00000019728	DDX54	86	60.817	Panthera_tigris_altaica
ENSSLDG00000010380	ddx54	98	59.033	ENSPTRG00000005483	DDX54	96	58.763	Pan_troglodytes
ENSSLDG00000010380	ddx54	98	58.200	ENSPANG00000008883	DDX54	96	58.743	Papio_anubis
ENSSLDG00000010380	ddx54	100	74.403	ENSPKIG00000018272	ddx54	96	74.855	Paramormyrops_kingsleyae
ENSSLDG00000010380	ddx54	53	77.754	ENSPSIG00000005055	DDX54	96	77.468	Pelodiscus_sinensis
ENSSLDG00000010380	ddx54	95	73.678	ENSPMGG00000010988	ddx54	98	73.775	Periophthalmus_magnuspinnatus
ENSSLDG00000010380	ddx54	100	59.326	ENSPEMG00000016701	Ddx54	95	59.532	Peromyscus_maniculatus_bairdii
ENSSLDG00000010380	ddx54	100	81.600	ENSPFOG00000019822	ddx54	98	81.374	Poecilia_formosa
ENSSLDG00000010380	ddx54	100	81.600	ENSPLAG00000004530	ddx54	98	81.374	Poecilia_latipinna
ENSSLDG00000010380	ddx54	100	81.600	ENSPMEG00000010803	ddx54	98	81.374	Poecilia_mexicana
ENSSLDG00000010380	ddx54	100	81.766	ENSPREG00000014372	ddx54	98	81.659	Poecilia_reticulata
ENSSLDG00000010380	ddx54	98	58.514	ENSPPYG00000004984	DDX54	96	58.629	Pongo_abelii
ENSSLDG00000010380	ddx54	98	56.083	ENSPCAG00000008462	DDX54	95	54.959	Procavia_capensis
ENSSLDG00000010380	ddx54	98	59.350	ENSPCOG00000006050	DDX54	96	57.768	Propithecus_coquereli
ENSSLDG00000010380	ddx54	90	79.767	ENSPVAG00000017347	DDX54	89	77.061	Pteropus_vampyrus
ENSSLDG00000010380	ddx54	100	75.445	ENSPNAG00000014459	ddx54	97	80.443	Pygocentrus_nattereri
ENSSLDG00000010380	ddx54	98	60.508	ENSRNOG00000001377	Ddx54	91	59.277	Rattus_norvegicus
ENSSLDG00000010380	ddx54	100	58.277	ENSRBIG00000032535	DDX54	94	58.304	Rhinopithecus_bieti
ENSSLDG00000010380	ddx54	100	54.922	ENSRROG00000029557	DDX54	94	55.168	Rhinopithecus_roxellana
ENSSLDG00000010380	ddx54	91	34.628	YDL031W	-	77	36.504	Saccharomyces_cerevisiae
ENSSLDG00000010380	ddx54	98	59.336	ENSSBOG00000028194	DDX54	96	59.018	Saimiri_boliviensis_boliviensis
ENSSLDG00000010380	ddx54	87	70.705	ENSSHAG00000015646	DDX54	97	58.952	Sarcophilus_harrisii
ENSSLDG00000010380	ddx54	98	75.669	ENSSFOG00015014981	ddx54	98	74.186	Scleropages_formosus
ENSSLDG00000010380	ddx54	98	83.796	ENSSMAG00000003210	ddx54	98	84.375	Scophthalmus_maximus
ENSSLDG00000010380	ddx54	100	97.941	ENSSDUG00000004474	ddx54	100	97.941	Seriola_dumerili
ENSSLDG00000010380	ddx54	98	63.115	ENSSPUG00000014141	DDX54	94	62.485	Sphenodon_punctatus
ENSSLDG00000010380	ddx54	93	81.058	ENSSPAG00000022918	ddx54	95	81.373	Stegastes_partitus
ENSSLDG00000010380	ddx54	98	59.635	ENSSSCG00000009876	DDX54	96	58.235	Sus_scrofa
ENSSLDG00000010380	ddx54	94	62.864	ENSTGUG00000009126	DDX54	98	62.299	Taeniopygia_guttata
ENSSLDG00000010380	ddx54	100	80.616	ENSTRUG00000014939	ddx54	98	80.836	Takifugu_rubripes
ENSSLDG00000010380	ddx54	100	78.418	ENSTNIG00000009037	ddx54	98	78.366	Tetraodon_nigroviridis
ENSSLDG00000010380	ddx54	71	78.519	ENSTBEG00000003783	DDX54	68	78.519	Tupaia_belangeri
ENSSLDG00000010380	ddx54	98	56.200	ENSTTRG00000016678	DDX54	96	56.307	Tursiops_truncatus
ENSSLDG00000010380	ddx54	98	59.251	ENSUAMG00000028387	DDX54	97	59.282	Ursus_americanus
ENSSLDG00000010380	ddx54	82	79.000	ENSUMAG00000010245	DDX54	94	79.894	Ursus_maritimus
ENSSLDG00000010380	ddx54	100	59.147	ENSVVUG00000010212	DDX54	96	59.238	Vulpes_vulpes
ENSSLDG00000010380	ddx54	99	62.187	ENSXETG00000016410	ddx54	98	61.761	Xenopus_tropicalis
ENSSLDG00000010380	ddx54	100	80.069	ENSXCOG00000002909	ddx54	98	79.439	Xiphophorus_couchianus
ENSSLDG00000010380	ddx54	100	81.537	ENSXMAG00000005312	ddx54	98	81.425	Xiphophorus_maculatus