EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010390 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1160 bases
Position: chrPEQF01094666.1:461-1620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	1	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	2	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	3	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	4	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	5	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	6	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	7	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	8	9
ENSSLDP00000013096	zf-C2H2	PF00096.26	8.2e-47	9	9
ENSSLDP00000013096	zf-met	PF12874.7	5.6e-15	1	3
ENSSLDP00000013096	zf-met	PF12874.7	5.6e-15	2	3
ENSSLDP00000013096	zf-met	PF12874.7	5.6e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013573	-	960	-	ENSSLDP00000013096	319 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000010390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010390	-	78	41.071	ENSSLDG00000014436	-	71	35.849
ENSSLDG00000010390	-	89	38.043	ENSSLDG00000002515	-	83	38.043
ENSSLDG00000010390	-	94	46.552	ENSSLDG00000004005	-	93	46.552
ENSSLDG00000010390	-	85	38.298	ENSSLDG00000004428	PRDM15	52	38.298
ENSSLDG00000010390	-	84	65.657	ENSSLDG00000009582	-	98	65.657
ENSSLDG00000010390	-	85	53.448	ENSSLDG00000014177	zbtb47b	67	53.448
ENSSLDG00000010390	-	91	52.941	ENSSLDG00000012320	-	94	57.000
ENSSLDG00000010390	-	97	37.097	ENSSLDG00000000457	-	76	37.417
ENSSLDG00000010390	-	97	42.395	ENSSLDG00000009821	-	94	42.395
ENSSLDG00000010390	-	84	49.074	ENSSLDG00000020432	-	90	49.074
ENSSLDG00000010390	-	88	43.548	ENSSLDG00000012821	znf236	67	36.296
ENSSLDG00000010390	-	83	45.789	ENSSLDG00000023661	-	84	43.049
ENSSLDG00000010390	-	83	46.009	ENSSLDG00000001787	zbtb24	85	46.237
ENSSLDG00000010390	-	88	45.455	ENSSLDG00000004485	-	68	45.455
ENSSLDG00000010390	-	95	64.474	ENSSLDG00000018598	-	99	61.017
ENSSLDG00000010390	-	86	56.122	ENSSLDG00000012036	-	96	58.553
ENSSLDG00000010390	-	89	32.645	ENSSLDG00000003269	znf710b	51	32.645
ENSSLDG00000010390	-	89	31.395	ENSSLDG00000000464	-	62	31.395
ENSSLDG00000010390	-	97	38.967	ENSSLDG00000016301	-	95	38.967
ENSSLDG00000010390	-	77	41.176	ENSSLDG00000017166	scrt1b	51	41.176
ENSSLDG00000010390	-	84	49.405	ENSSLDG00000020727	-	96	49.405
ENSSLDG00000010390	-	84	41.441	ENSSLDG00000005670	-	91	41.441
ENSSLDG00000010390	-	84	70.632	ENSSLDG00000018493	-	82	70.632
ENSSLDG00000010390	-	77	45.366	ENSSLDG00000001850	-	56	45.366
ENSSLDG00000010390	-	89	47.644	ENSSLDG00000006288	-	95	47.644
ENSSLDG00000010390	-	83	46.484	ENSSLDG00000000859	-	85	44.521
ENSSLDG00000010390	-	92	44.248	ENSSLDG00000012852	snai2	73	44.248
ENSSLDG00000010390	-	90	52.743	ENSSLDG00000020455	-	94	53.589
ENSSLDG00000010390	-	88	35.878	ENSSLDG00000025359	-	53	39.815
ENSSLDG00000010390	-	82	51.376	ENSSLDG00000000432	-	86	51.376
ENSSLDG00000010390	-	85	38.889	ENSSLDG00000011849	-	68	38.889
ENSSLDG00000010390	-	83	59.091	ENSSLDG00000015049	-	94	59.091
ENSSLDG00000010390	-	82	49.383	ENSSLDG00000000202	-	76	49.383
ENSSLDG00000010390	-	78	43.478	ENSSLDG00000014465	-	77	36.134
ENSSLDG00000010390	-	87	51.748	ENSSLDG00000018033	-	59	51.748
ENSSLDG00000010390	-	97	60.900	ENSSLDG00000005850	-	94	67.170
ENSSLDG00000010390	-	97	40.000	ENSSLDG00000017718	zbtb48	64	40.000
ENSSLDG00000010390	-	79	50.000	ENSSLDG00000013170	zbtb17	84	50.000
ENSSLDG00000010390	-	89	44.079	ENSSLDG00000013823	gfi1b	63	44.079
ENSSLDG00000010390	-	83	39.683	ENSSLDG00000014166	znf319b	81	39.683
ENSSLDG00000010390	-	81	49.451	ENSSLDG00000025676	-	50	49.451
ENSSLDG00000010390	-	83	48.333	ENSSLDG00000001860	-	80	48.333
ENSSLDG00000010390	-	93	50.820	ENSSLDG00000015116	-	87	42.308
ENSSLDG00000010390	-	84	45.536	ENSSLDG00000017614	-	92	45.536
ENSSLDG00000010390	-	83	51.579	ENSSLDG00000020163	gfi1ab	50	44.079
ENSSLDG00000010390	-	97	63.636	ENSSLDG00000006217	-	92	63.636
ENSSLDG00000010390	-	91	68.041	ENSSLDG00000004756	-	99	68.385
ENSSLDG00000010390	-	83	40.769	ENSSLDG00000024295	ZNF319	87	40.769
ENSSLDG00000010390	-	97	60.000	ENSSLDG00000020675	-	96	57.812
ENSSLDG00000010390	-	86	46.667	ENSSLDG00000013353	prdm5	78	44.907
ENSSLDG00000010390	-	89	47.273	ENSSLDG00000006994	-	94	47.273
ENSSLDG00000010390	-	83	39.080	ENSSLDG00000023060	-	69	43.814
ENSSLDG00000010390	-	79	32.184	ENSSLDG00000015796	-	74	32.184
ENSSLDG00000010390	-	94	41.065	ENSSLDG00000005839	-	59	41.065
ENSSLDG00000010390	-	82	43.561	ENSSLDG00000000376	-	83	43.561
ENSSLDG00000010390	-	97	59.016	ENSSLDG00000012133	-	87	58.442
ENSSLDG00000010390	-	100	63.758	ENSSLDG00000010190	-	98	63.758
ENSSLDG00000010390	-	94	52.414	ENSSLDG00000000203	-	91	50.617
ENSSLDG00000010390	-	83	50.000	ENSSLDG00000006724	-	92	50.000
ENSSLDG00000010390	-	88	48.485	ENSSLDG00000000352	-	90	48.485
ENSSLDG00000010390	-	82	56.024	ENSSLDG00000004098	-	98	56.024
ENSSLDG00000010390	-	89	34.921	ENSSLDG00000025265	znf526	63	34.862
ENSSLDG00000010390	-	82	47.059	ENSSLDG00000021278	-	60	47.059
ENSSLDG00000010390	-	97	63.636	ENSSLDG00000005868	-	94	63.636
ENSSLDG00000010390	-	92	64.679	ENSSLDG00000018273	-	86	64.679
ENSSLDG00000010390	-	82	51.515	ENSSLDG00000009061	-	91	54.237
ENSSLDG00000010390	-	97	54.634	ENSSLDG00000020655	-	62	51.064
ENSSLDG00000010390	-	97	60.135	ENSSLDG00000007756	-	97	60.140
ENSSLDG00000010390	-	83	47.561	ENSSLDG00000002756	-	76	47.561
ENSSLDG00000010390	-	97	65.049	ENSSLDG00000016317	-	88	64.751
ENSSLDG00000010390	-	85	43.902	ENSSLDG00000002776	-	67	43.902
ENSSLDG00000010390	-	84	33.043	ENSSLDG00000018521	znf646	72	41.176
ENSSLDG00000010390	-	96	55.195	ENSSLDG00000013760	-	99	55.195
ENSSLDG00000010390	-	96	65.246	ENSSLDG00000017937	-	95	60.150
ENSSLDG00000010390	-	97	57.143	ENSSLDG00000008645	-	91	57.143
ENSSLDG00000010390	-	82	47.778	ENSSLDG00000007568	-	74	47.778
ENSSLDG00000010390	-	82	42.623	ENSSLDG00000012415	si:dkey-89b17.4	59	32.422
ENSSLDG00000010390	-	87	49.375	ENSSLDG00000020990	-	53	49.375
ENSSLDG00000010390	-	83	48.756	ENSSLDG00000007524	-	92	45.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010390	-	96	45.833	ENSAPEG00000021575	-	66	45.833	Amphiprion_percula
ENSSLDG00000010390	-	87	45.528	ENSACLG00000017925	-	65	45.528	Astatotilapia_calliptera
ENSSLDG00000010390	-	87	51.282	ENSAMXG00000037709	-	88	51.282	Astyanax_mexicanus
ENSSLDG00000010390	-	89	51.770	ENSAMXG00000041609	-	96	52.985	Astyanax_mexicanus
ENSSLDG00000010390	-	91	48.289	ENSCSAVG00000007918	-	99	48.289	Ciona_savignyi
ENSSLDG00000010390	-	97	45.528	ENSHBUG00000002307	-	74	44.186	Haplochromis_burtoni
ENSSLDG00000010390	-	97	48.137	ENSHBUG00000012007	-	82	48.137	Haplochromis_burtoni
ENSSLDG00000010390	-	87	45.528	ENSMZEG00005024424	-	65	45.528	Maylandia_zebra
ENSSLDG00000010390	-	91	42.105	ENSOANG00000005971	-	77	42.105	Ornithorhynchus_anatinus
ENSSLDG00000010390	-	82	44.828	ENSPMEG00000014701	-	65	42.642	Poecilia_mexicana
ENSSLDG00000010390	-	97	43.902	ENSSDUG00000002174	-	75	43.902	Seriola_dumerili
ENSSLDG00000010390	-	89	41.611	ENSSPAG00000008958	-	90	44.872	Stegastes_partitus
ENSSLDG00000010390	-	93	48.848	ENSTGUG00000015090	-	99	48.848	Taeniopygia_guttata