EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010460 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 135-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7389 bases
Position: chrPEQF01099058.1:959119-966507
Accession: 111663707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	1	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	2	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	3	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	4	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	5	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	6	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	7	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	8	9
ENSSLDP00000013130	zf-C2H2	PF00096.26	1e-49	9	9
ENSSLDP00000013130	zf-met	PF12874.7	1.4e-12	1	3
ENSSLDP00000013130	zf-met	PF12874.7	1.4e-12	2	3
ENSSLDP00000013130	zf-met	PF12874.7	1.4e-12	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013609	-	4892	XM_023418017	ENSSLDP00000013130	787 (aa)	XP_023273785	UPI000C6F9735

Gene Model

Click here to download ENSSLDG00000010460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010460	-	56	40.132	ENSSLDG00000017937	-	94	43.961
ENSSLDG00000010460	-	95	36.842	ENSSLDG00000004485	-	89	40.175
ENSSLDG00000010460	-	50	42.857	ENSSLDG00000005839	-	71	42.857
ENSSLDG00000010460	-	52	42.857	ENSSLDG00000018033	-	59	42.857
ENSSLDG00000010460	-	51	46.324	ENSSLDG00000020990	-	57	46.324

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010460	-	50	45.679	ENSAPOG00000002691	-	59	44.186	Acanthochromis_polyacanthus
ENSSLDG00000010460	-	56	42.690	ENSAPOG00000013212	-	100	43.333	Acanthochromis_polyacanthus
ENSSLDG00000010460	-	51	43.836	ENSAOCG00000015586	-	85	42.540	Amphiprion_ocellaris
ENSSLDG00000010460	-	53	44.928	ENSAPEG00000005462	-	86	40.435	Amphiprion_percula
ENSSLDG00000010460	-	62	41.880	ENSAPEG00000007389	-	97	50.000	Amphiprion_percula
ENSSLDG00000010460	-	100	79.288	ENSCSEG00000009915	-	100	79.429	Cynoglossus_semilaevis
ENSSLDG00000010460	-	50	40.663	ENSCVAG00000013337	-	90	42.244	Cyprinodon_variegatus
ENSSLDG00000010460	-	94	38.896	ENSDARG00000095332	si:dkey-14d8.1	96	37.631	Danio_rerio
ENSSLDG00000010460	-	53	40.000	ENSEBUG00000002371	-	70	39.544	Eptatretus_burgeri
ENSSLDG00000010460	-	55	38.868	ENSEBUG00000007012	-	94	39.373	Eptatretus_burgeri
ENSSLDG00000010460	-	55	39.803	ENSEBUG00000014050	-	74	42.105	Eptatretus_burgeri
ENSSLDG00000010460	-	84	76.391	ENSFHEG00000018423	-	99	76.090	Fundulus_heteroclitus
ENSSLDG00000010460	-	99	77.904	ENSGAFG00000018340	-	99	77.146	Gambusia_affinis
ENSSLDG00000010460	-	100	84.065	ENSLBEG00000001920	-	100	83.940	Labrus_bergylta
ENSSLDG00000010460	-	99	88.689	ENSMAMG00000009555	-	100	88.689	Mastacembelus_armatus
ENSSLDG00000010460	-	55	42.705	ENSMMOG00000000299	-	100	42.857	Mola_mola
ENSSLDG00000010460	-	51	42.478	ENSMALG00000020889	-	97	43.651	Monopterus_albus
ENSSLDG00000010460	-	52	40.068	ENSMALG00000003975	-	93	40.230	Monopterus_albus
ENSSLDG00000010460	-	98	88.810	ENSORLG00015017255	-	100	79.188	Oryzias_latipes_hsok
ENSSLDG00000010460	-	55	36.220	ENSOMEG00000022975	-	62	36.220	Oryzias_melastigma
ENSSLDG00000010460	-	50	48.148	ENSOMEG00000002268	-	89	40.690	Oryzias_melastigma
ENSSLDG00000010460	-	98	67.655	ENSPMGG00000023739	-	79	90.286	Periophthalmus_magnuspinnatus
ENSSLDG00000010460	-	58	44.737	ENSPFOG00000005592	-	99	45.935	Poecilia_formosa
ENSSLDG00000010460	-	99	78.200	ENSPFOG00000016324	-	99	77.186	Poecilia_formosa
ENSSLDG00000010460	-	99	78.200	ENSPLAG00000001279	-	99	77.186	Poecilia_latipinna
ENSSLDG00000010460	-	99	78.680	ENSPMEG00000016548	-	99	77.538	Poecilia_mexicana
ENSSLDG00000010460	-	100	89.327	ENSSMAG00000000183	-	100	89.327	Scophthalmus_maximus
ENSSLDG00000010460	-	55	42.222	ENSSMAG00000006197	-	100	40.066	Scophthalmus_maximus
ENSSLDG00000010460	-	100	99.238	ENSSDUG00000006133	-	100	99.238	Seriola_dumerili
ENSSLDG00000010460	-	54	38.356	ENSSDUG00000000786	-	95	44.578	Seriola_dumerili
ENSSLDG00000010460	-	100	86.150	ENSSPAG00000013319	-	99	86.150	Stegastes_partitus
ENSSLDG00000010460	-	51	42.262	ENSXCOG00000007979	-	71	42.262	Xiphophorus_couchianus
ENSSLDG00000010460	-	99	77.313	ENSXMAG00000024928	-	99	77.030	Xiphophorus_maculatus