EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010601 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8160 bases
Position: chrPEQF01099166.1:394-8553
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013314	RVT_1	PF00078.27	1.8e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000013800	-	3147	-	ENSSLDP00000013314	1048 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000010601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010601	-	86	37.541	ENSSLDG00000004747	-	78	37.676
ENSSLDG00000010601	-	87	37.460	ENSSLDG00000000631	-	78	37.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010601	-	87	40.781	ENSAOCG00000008973	-	63	40.781	Amphiprion_ocellaris
ENSSLDG00000010601	-	86	39.059	ENSAPEG00000012642	-	72	39.059	Amphiprion_percula
ENSSLDG00000010601	-	87	36.973	ENSACLG00000014673	-	72	37.029	Astatotilapia_calliptera
ENSSLDG00000010601	-	87	34.136	ENSACLG00000012298	-	73	34.136	Astatotilapia_calliptera
ENSSLDG00000010601	-	76	35.316	ENSACLG00000026023	-	75	35.316	Astatotilapia_calliptera
ENSSLDG00000010601	-	80	39.765	ENSACLG00000018177	-	75	39.765	Astatotilapia_calliptera
ENSSLDG00000010601	-	72	33.030	ENSACLG00000027045	-	90	32.846	Astatotilapia_calliptera
ENSSLDG00000010601	-	86	33.150	ENSACLG00000023850	-	72	33.150	Astatotilapia_calliptera
ENSSLDG00000010601	-	91	36.382	ENSACLG00000002748	-	82	36.382	Astatotilapia_calliptera
ENSSLDG00000010601	-	69	40.163	ENSAMXG00000036752	-	89	40.163	Astyanax_mexicanus
ENSSLDG00000010601	-	70	33.422	ENSAMXG00000033587	-	89	33.515	Astyanax_mexicanus
ENSSLDG00000010601	-	85	38.546	ENSAMXG00000042761	-	71	38.546	Astyanax_mexicanus
ENSSLDG00000010601	-	86	37.134	ENSAMXG00000037218	-	92	37.134	Astyanax_mexicanus
ENSSLDG00000010601	-	84	34.671	ENSAMXG00000034221	-	71	34.525	Astyanax_mexicanus
ENSSLDG00000010601	-	86	35.551	ENSAMXG00000031230	-	72	35.551	Astyanax_mexicanus
ENSSLDG00000010601	-	85	34.406	ENSKMAG00000018279	-	72	34.406	Kryptolebias_marmoratus
ENSSLDG00000010601	-	85	36.645	ENSKMAG00000002601	-	73	36.645	Kryptolebias_marmoratus
ENSSLDG00000010601	-	87	36.030	ENSKMAG00000014428	-	73	36.030	Kryptolebias_marmoratus
ENSSLDG00000010601	-	85	36.645	ENSKMAG00000006893	-	91	36.645	Kryptolebias_marmoratus
ENSSLDG00000010601	-	85	36.424	ENSKMAG00000013004	-	71	36.424	Kryptolebias_marmoratus
ENSSLDG00000010601	-	86	38.037	ENSKMAG00000007098	-	71	38.504	Kryptolebias_marmoratus
ENSSLDG00000010601	-	85	36.790	ENSKMAG00000006598	-	78	36.790	Kryptolebias_marmoratus
ENSSLDG00000010601	-	85	36.114	ENSKMAG00000020345	-	72	36.114	Kryptolebias_marmoratus
ENSSLDG00000010601	-	65	38.068	ENSLBEG00000017877	-	87	38.068	Labrus_bergylta
ENSSLDG00000010601	-	85	33.518	ENSMZEG00005001544	-	90	33.518	Maylandia_zebra
ENSSLDG00000010601	-	63	39.823	ENSMZEG00005013632	-	89	40.237	Maylandia_zebra
ENSSLDG00000010601	-	61	34.557	ENSONIG00000020880	-	97	34.557	Oreochromis_niloticus
ENSSLDG00000010601	-	77	34.592	ENSONIG00000020778	-	90	34.592	Oreochromis_niloticus
ENSSLDG00000010601	-	86	32.604	ENSORLG00000024310	-	73	32.604	Oryzias_latipes
ENSSLDG00000010601	-	66	37.784	ENSORLG00000023193	-	83	38.068	Oryzias_latipes
ENSSLDG00000010601	-	86	36.017	ENSORLG00000026691	-	73	35.978	Oryzias_latipes
ENSSLDG00000010601	-	86	35.691	ENSORLG00000029798	-	73	35.652	Oryzias_latipes
ENSSLDG00000010601	-	86	34.825	ENSORLG00000029419	-	72	34.825	Oryzias_latipes
ENSSLDG00000010601	-	86	36.017	ENSORLG00000025420	-	73	35.978	Oryzias_latipes
ENSSLDG00000010601	-	85	34.181	ENSORLG00020000561	-	71	34.181	Oryzias_latipes_hni
ENSSLDG00000010601	-	86	35.909	ENSORLG00020020951	-	73	35.870	Oryzias_latipes_hni
ENSSLDG00000010601	-	76	34.491	ENSORLG00020016539	-	90	34.491	Oryzias_latipes_hni
ENSSLDG00000010601	-	85	36.526	ENSORLG00020001169	-	69	36.526	Oryzias_latipes_hni
ENSSLDG00000010601	-	86	37.980	ENSORLG00020008142	-	71	37.980	Oryzias_latipes_hni
ENSSLDG00000010601	-	64	35.242	ENSORLG00020003581	-	83	35.242	Oryzias_latipes_hni
ENSSLDG00000010601	-	85	34.181	ENSORLG00015013713	-	71	34.181	Oryzias_latipes_hsok
ENSSLDG00000010601	-	85	39.006	ENSORLG00015002129	-	70	39.006	Oryzias_latipes_hsok
ENSSLDG00000010601	-	86	35.878	ENSORLG00015002592	-	70	35.878	Oryzias_latipes_hsok
ENSSLDG00000010601	-	67	36.185	ENSOMEG00000006131	-	90	36.185	Oryzias_melastigma
ENSSLDG00000010601	-	84	37.625	ENSOMEG00000021560	-	87	37.625	Oryzias_melastigma
ENSSLDG00000010601	-	64	37.298	ENSPFOG00000021895	-	70	37.298	Poecilia_formosa
ENSSLDG00000010601	-	85	33.516	ENSPREG00000005522	-	73	33.516	Poecilia_reticulata
ENSSLDG00000010601	-	84	38.710	ENSPREG00000018911	-	71	38.529	Poecilia_reticulata
ENSSLDG00000010601	-	80	34.759	ENSXETG00000034016	-	88	34.759	Xenopus_tropicalis
ENSSLDG00000010601	-	85	38.692	ENSXMAG00000027070	-	70	38.692	Xiphophorus_maculatus
ENSSLDG00000010601	-	87	36.916	ENSXMAG00000027558	-	72	37.751	Xiphophorus_maculatus
ENSSLDG00000010601	-	72	35.752	ENSXMAG00000021762	-	85	35.782	Xiphophorus_maculatus
ENSSLDG00000010601	-	71	37.417	ENSXMAG00000023805	-	87	37.568	Xiphophorus_maculatus
ENSSLDG00000010601	-	73	35.538	ENSXMAG00000024492	-	90	35.538	Xiphophorus_maculatus
ENSSLDG00000010601	-	85	35.770	ENSXMAG00000028274	-	76	35.770	Xiphophorus_maculatus