EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010845 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 21302 bases
Position: chrPEQF01099362.1:209497-230798
Accession: 111671527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013617	RRM_1	PF00076.22	3.2e-16	1	1
ENSSLDP00000013605	RRM_1	PF00076.22	3.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000014119	-	690	-	ENSSLDP00000013617	229 (aa)	-	-
ENSSLDT00000014107	-	2568	XM_023428636	ENSSLDP00000013605	250 (aa)	XP_023284404	UPI000BBE780C

Gene Model

Click here to download ENSSLDG00000010845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010845	rbm38	98	67.460	ENSSLDG00000011778	RBM38	100	67.843
ENSSLDG00000010845	rbm38	88	30.526	ENSSLDG00000016832	MSI1	91	30.526
ENSSLDG00000010845	rbm38	68	69.182	ENSSLDG00000015378	rbm24b	100	57.983
ENSSLDG00000010845	rbm38	59	75.556	ENSSLDG00000012657	rbm24a	100	59.402
ENSSLDG00000010845	rbm38	78	34.483	ENSSLDG00000025339	dazap1	78	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010845	rbm38	90	63.426	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSSLDG00000010845	rbm38	98	66.270	ENSAPOG00000009939	-	100	67.589	Acanthochromis_polyacanthus
ENSSLDG00000010845	rbm38	100	96.000	ENSAPOG00000003301	rbm38	100	96.000	Acanthochromis_polyacanthus
ENSSLDG00000010845	rbm38	100	93.200	ENSACIG00000000010	rbm38	100	93.200	Amphilophus_citrinellus
ENSSLDG00000010845	rbm38	98	66.275	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSSLDG00000010845	rbm38	93	70.968	ENSAOCG00000012559	RBM38	98	67.500	Amphiprion_ocellaris
ENSSLDG00000010845	rbm38	100	96.000	ENSAOCG00000013497	-	100	96.000	Amphiprion_ocellaris
ENSSLDG00000010845	rbm38	98	66.270	ENSAPEG00000023581	-	100	66.270	Amphiprion_percula
ENSSLDG00000010845	rbm38	100	96.000	ENSAPEG00000013137	rbm38	100	96.000	Amphiprion_percula
ENSSLDG00000010845	rbm38	98	67.460	ENSATEG00000016710	-	100	67.451	Anabas_testudineus
ENSSLDG00000010845	rbm38	100	92.000	ENSATEG00000016366	rbm38	100	92.000	Anabas_testudineus
ENSSLDG00000010845	rbm38	92	60.090	ENSACAG00000016238	RBM38	90	60.090	Anolis_carolinensis
ENSSLDG00000010845	rbm38	90	63.889	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSSLDG00000010845	rbm38	98	65.490	ENSACLG00000019514	-	100	65.490	Astatotilapia_calliptera
ENSSLDG00000010845	rbm38	95	57.983	ENSAMXG00000038120	rbm38	96	57.983	Astyanax_mexicanus
ENSSLDG00000010845	rbm38	98	63.200	ENSAMXG00000015601	-	100	63.200	Astyanax_mexicanus
ENSSLDG00000010845	rbm38	90	63.889	ENSBTAG00000008105	RBM38	89	63.889	Bos_taurus
ENSSLDG00000010845	rbm38	63	59.310	WBGene00006321	sup-12	77	63.780	Caenorhabditis_elegans
ENSSLDG00000010845	rbm38	90	62.963	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSSLDG00000010845	rbm38	90	63.256	ENSCAFG00020021943	RBM38	89	63.256	Canis_lupus_dingo
ENSSLDG00000010845	rbm38	97	60.000	ENSCHIG00000002609	RBM38	97	60.000	Capra_hircus
ENSSLDG00000010845	rbm38	90	63.256	ENSCPOG00000012781	RBM38	89	63.256	Cavia_porcellus
ENSSLDG00000010845	rbm38	90	62.963	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSSLDG00000010845	rbm38	90	64.019	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSSLDG00000010845	rbm38	90	63.426	ENSCLAG00000005906	RBM38	92	63.426	Chinchilla_lanigera
ENSSLDG00000010845	rbm38	90	64.019	ENSCSAG00000015503	RBM38	89	64.019	Chlorocebus_sabaeus
ENSSLDG00000010845	rbm38	92	61.435	ENSCPBG00000024059	RBM38	100	61.435	Chrysemys_picta_bellii
ENSSLDG00000010845	rbm38	66	62.581	ENSCSAVG00000001132	-	58	62.581	Ciona_savignyi
ENSSLDG00000010845	rbm38	93	50.000	ENSCANG00000030105	-	80	50.000	Colobus_angolensis_palliatus
ENSSLDG00000010845	rbm38	97	59.574	ENSCGRG00001012928	Rbm38	97	60.593	Cricetulus_griseus_chok1gshd
ENSSLDG00000010845	rbm38	90	68.780	ENSCSEG00000020943	rbm38	68	68.900	Cynoglossus_semilaevis
ENSSLDG00000010845	rbm38	98	66.953	ENSCSEG00000004701	-	99	67.249	Cynoglossus_semilaevis
ENSSLDG00000010845	rbm38	100	84.400	ENSCVAG00000015952	rbm38	100	84.400	Cyprinodon_variegatus
ENSSLDG00000010845	rbm38	98	64.286	ENSCVAG00000005472	-	100	65.476	Cyprinodon_variegatus
ENSSLDG00000010845	rbm38	98	64.777	ENSDARG00000058818	rbm38	100	64.777	Danio_rerio
ENSSLDG00000010845	rbm38	90	62.559	ENSDNOG00000032004	RBM38	98	62.559	Dasypus_novemcinctus
ENSSLDG00000010845	rbm38	90	63.721	ENSECAG00000007700	RBM38	89	63.721	Equus_caballus
ENSSLDG00000010845	rbm38	90	62.500	ENSEEUG00000013489	RBM38	89	63.426	Erinaceus_europaeus
ENSSLDG00000010845	rbm38	92	71.739	ENSELUG00000000585	-	100	71.739	Esox_lucius
ENSSLDG00000010845	rbm38	98	67.059	ENSELUG00000005849	-	100	67.059	Esox_lucius
ENSSLDG00000010845	rbm38	90	62.326	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSSLDG00000010845	rbm38	76	68.927	ENSFALG00000010805	RBM38	90	68.927	Ficedula_albicollis
ENSSLDG00000010845	rbm38	100	87.251	ENSFHEG00000017748	rbm38	100	87.251	Fundulus_heteroclitus
ENSSLDG00000010845	rbm38	98	64.683	ENSFHEG00000006160	-	100	64.113	Fundulus_heteroclitus
ENSSLDG00000010845	rbm38	82	72.251	ENSGMOG00000016655	-	100	74.346	Gadus_morhua
ENSSLDG00000010845	rbm38	92	61.261	ENSGALG00000026081	RBM38	100	62.332	Gallus_gallus
ENSSLDG00000010845	rbm38	92	87.678	ENSGACG00000015224	rbm38	100	87.678	Gasterosteus_aculeatus
ENSSLDG00000010845	rbm38	92	68.919	ENSGACG00000009873	-	100	68.919	Gasterosteus_aculeatus
ENSSLDG00000010845	rbm38	92	62.332	ENSGAGG00000001187	RBM38	100	62.332	Gopherus_agassizii
ENSSLDG00000010845	rbm38	98	65.737	ENSHBUG00000011778	-	100	65.737	Haplochromis_burtoni
ENSSLDG00000010845	rbm38	100	93.600	ENSHBUG00000012058	rbm38	100	93.600	Haplochromis_burtoni
ENSSLDG00000010845	rbm38	90	63.426	ENSHGLG00000015077	RBM38	89	63.426	Heterocephalus_glaber_female
ENSSLDG00000010845	rbm38	100	63.745	ENSHCOG00000019040	rbm38	100	63.745	Hippocampus_comes
ENSSLDG00000010845	rbm38	87	71.287	ENSHCOG00000005622	-	57	72.906	Hippocampus_comes
ENSSLDG00000010845	rbm38	99	60.081	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSSLDG00000010845	rbm38	91	74.468	ENSKMAG00000012402	rbm38	99	74.468	Kryptolebias_marmoratus
ENSSLDG00000010845	rbm38	100	92.800	ENSLBEG00000018878	rbm38	100	92.800	Labrus_bergylta
ENSSLDG00000010845	rbm38	98	65.737	ENSLBEG00000016163	RBM38	100	66.148	Labrus_bergylta
ENSSLDG00000010845	rbm38	98	66.532	ENSLOCG00000003456	rbm38	100	66.532	Lepisosteus_oculatus
ENSSLDG00000010845	rbm38	90	64.019	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSSLDG00000010845	rbm38	90	64.019	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSSLDG00000010845	rbm38	90	64.019	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSSLDG00000010845	rbm38	52	65.546	ENSMLEG00000043261	-	94	65.546	Mandrillus_leucophaeus
ENSSLDG00000010845	rbm38	98	68.924	ENSMAMG00000020499	RBM38	100	68.898	Mastacembelus_armatus
ENSSLDG00000010845	rbm38	100	95.600	ENSMAMG00000024135	rbm38	100	95.600	Mastacembelus_armatus
ENSSLDG00000010845	rbm38	100	93.600	ENSMZEG00005026036	rbm38	100	93.600	Maylandia_zebra
ENSSLDG00000010845	rbm38	98	65.737	ENSMZEG00005000849	-	100	65.737	Maylandia_zebra
ENSSLDG00000010845	rbm38	97	60.426	ENSMAUG00000021211	Rbm38	97	61.441	Mesocricetus_auratus
ENSSLDG00000010845	rbm38	90	63.426	ENSMICG00000038011	RBM38	98	63.426	Microcebus_murinus
ENSSLDG00000010845	rbm38	97	60.000	ENSMOCG00000008715	Rbm38	97	61.017	Microtus_ochrogaster
ENSSLDG00000010845	rbm38	93	71.233	ENSMMOG00000020051	-	100	66.403	Mola_mola
ENSSLDG00000010845	rbm38	99	58.506	ENSMODG00000016458	RBM38	100	58.921	Monodelphis_domestica
ENSSLDG00000010845	rbm38	100	77.200	ENSMALG00000022327	rbm38	100	78.000	Monopterus_albus
ENSSLDG00000010845	rbm38	82	76.190	ENSMALG00000004680	RBM38	71	76.842	Monopterus_albus
ENSSLDG00000010845	rbm38	97	60.169	MGP_CAROLIEiJ_G0024745	Rbm38	97	60.169	Mus_caroli
ENSSLDG00000010845	rbm38	97	60.169	ENSMUSG00000027510	Rbm38	97	60.169	Mus_musculus
ENSSLDG00000010845	rbm38	97	59.746	MGP_PahariEiJ_G0026186	Rbm38	97	59.746	Mus_pahari
ENSSLDG00000010845	rbm38	97	60.169	MGP_SPRETEiJ_G0025665	Rbm38	97	60.169	Mus_spretus
ENSSLDG00000010845	rbm38	81	66.489	ENSMPUG00000006518	RBM38	98	64.390	Mustela_putorius_furo
ENSSLDG00000010845	rbm38	90	63.426	ENSMLUG00000011140	RBM38	98	63.426	Myotis_lucifugus
ENSSLDG00000010845	rbm38	100	93.200	ENSNBRG00000022685	rbm38	100	93.200	Neolamprologus_brichardi
ENSSLDG00000010845	rbm38	98	65.490	ENSNBRG00000022545	-	100	65.490	Neolamprologus_brichardi
ENSSLDG00000010845	rbm38	51	73.276	ENSMEUG00000005475	-	91	71.311	Notamacropus_eugenii
ENSSLDG00000010845	rbm38	90	64.352	ENSODEG00000007980	RBM38	89	64.352	Octodon_degus
ENSSLDG00000010845	rbm38	98	93.878	ENSONIG00000017073	rbm38	100	93.878	Oreochromis_niloticus
ENSSLDG00000010845	rbm38	98	65.354	ENSONIG00000020324	-	100	65.354	Oreochromis_niloticus
ENSSLDG00000010845	rbm38	90	62.326	ENSOANG00000009259	RBM38	81	63.551	Ornithorhynchus_anatinus
ENSSLDG00000010845	rbm38	100	84.064	ENSORLG00000012154	rbm38	100	84.064	Oryzias_latipes
ENSSLDG00000010845	rbm38	98	62.992	ENSORLG00000027180	-	100	63.424	Oryzias_latipes
ENSSLDG00000010845	rbm38	100	62.403	ENSORLG00020020751	-	100	63.424	Oryzias_latipes_hni
ENSSLDG00000010845	rbm38	100	84.064	ENSORLG00020017871	rbm38	100	84.064	Oryzias_latipes_hni
ENSSLDG00000010845	rbm38	100	84.064	ENSORLG00015012606	rbm38	100	84.064	Oryzias_latipes_hsok
ENSSLDG00000010845	rbm38	98	63.745	ENSORLG00015017040	-	100	63.636	Oryzias_latipes_hsok
ENSSLDG00000010845	rbm38	98	64.286	ENSOMEG00000023912	-	100	64.286	Oryzias_melastigma
ENSSLDG00000010845	rbm38	100	83.267	ENSOMEG00000006805	rbm38	100	83.267	Oryzias_melastigma
ENSSLDG00000010845	rbm38	90	63.889	ENSOGAG00000029136	RBM38	88	63.889	Otolemur_garnettii
ENSSLDG00000010845	rbm38	90	62.326	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSSLDG00000010845	rbm38	55	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSSLDG00000010845	rbm38	86	64.000	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSSLDG00000010845	rbm38	90	64.019	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSSLDG00000010845	rbm38	91	52.074	ENSPANG00000033127	-	92	52.074	Papio_anubis
ENSSLDG00000010845	rbm38	99	60.000	ENSPKIG00000025417	rbm38	100	62.891	Paramormyrops_kingsleyae
ENSSLDG00000010845	rbm38	92	68.037	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSSLDG00000010845	rbm38	92	61.261	ENSPSIG00000011649	RBM38	92	61.261	Pelodiscus_sinensis
ENSSLDG00000010845	rbm38	100	78.884	ENSPMGG00000011343	rbm38	100	81.673	Periophthalmus_magnuspinnatus
ENSSLDG00000010845	rbm38	98	62.205	ENSPMGG00000017094	-	100	62.205	Periophthalmus_magnuspinnatus
ENSSLDG00000010845	rbm38	99	58.921	ENSPCIG00000013648	RBM38	100	58.921	Phascolarctos_cinereus
ENSSLDG00000010845	rbm38	100	87.402	ENSPFOG00000011658	rbm38	100	87.402	Poecilia_formosa
ENSSLDG00000010845	rbm38	100	87.008	ENSPLAG00000005218	rbm38	100	87.008	Poecilia_latipinna
ENSSLDG00000010845	rbm38	98	64.940	ENSPLAG00000002500	-	100	64.940	Poecilia_latipinna
ENSSLDG00000010845	rbm38	100	87.795	ENSPMEG00000015770	rbm38	100	87.795	Poecilia_mexicana
ENSSLDG00000010845	rbm38	100	87.008	ENSPREG00000007398	rbm38	100	87.008	Poecilia_reticulata
ENSSLDG00000010845	rbm38	90	63.256	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSSLDG00000010845	rbm38	90	40.465	ENSPVAG00000006457	RBM38	92	39.419	Pteropus_vampyrus
ENSSLDG00000010845	rbm38	100	93.200	ENSPNYG00000021373	rbm38	100	93.200	Pundamilia_nyererei
ENSSLDG00000010845	rbm38	98	65.490	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSSLDG00000010845	rbm38	95	61.506	ENSPNAG00000010596	rbm38	96	61.506	Pygocentrus_nattereri
ENSSLDG00000010845	rbm38	99	64.103	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSSLDG00000010845	rbm38	97	61.017	ENSRNOG00000006420	Rbm38	97	61.017	Rattus_norvegicus
ENSSLDG00000010845	rbm38	92	54.630	ENSRROG00000036388	-	89	54.630	Rhinopithecus_roxellana
ENSSLDG00000010845	rbm38	90	62.963	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSSLDG00000010845	rbm38	99	59.259	ENSSFOG00015004453	rbm38	100	63.786	Scleropages_formosus
ENSSLDG00000010845	rbm38	98	66.667	ENSSDUG00000021082	RBM38	100	67.059	Seriola_dumerili
ENSSLDG00000010845	rbm38	100	100.000	ENSSDUG00000022611	rbm38	100	100.000	Seriola_dumerili
ENSSLDG00000010845	rbm38	100	96.000	ENSSPAG00000011113	rbm38	100	96.000	Stegastes_partitus
ENSSLDG00000010845	rbm38	98	66.667	ENSSPAG00000020989	RBM38	100	66.667	Stegastes_partitus
ENSSLDG00000010845	rbm38	90	62.326	ENSSSCG00000007504	RBM38	89	62.326	Sus_scrofa
ENSSLDG00000010845	rbm38	100	86.000	ENSTRUG00000024954	rbm38	100	86.400	Takifugu_rubripes
ENSSLDG00000010845	rbm38	98	64.173	ENSTRUG00000019869	-	100	64.567	Takifugu_rubripes
ENSSLDG00000010845	rbm38	92	68.142	ENSTNIG00000007093	-	100	68.142	Tetraodon_nigroviridis
ENSSLDG00000010845	rbm38	90	62.791	ENSUAMG00000019780	RBM38	89	62.791	Ursus_americanus
ENSSLDG00000010845	rbm38	90	63.256	ENSVVUG00000017246	RBM38	89	63.256	Vulpes_vulpes
ENSSLDG00000010845	rbm38	92	59.292	ENSXETG00000011268	rbm38	99	60.619	Xenopus_tropicalis
ENSSLDG00000010845	rbm38	52	79.200	ENSXCOG00000017324	-	62	75.735	Xiphophorus_couchianus
ENSSLDG00000010845	rbm38	100	88.400	ENSXMAG00000023662	rbm38	100	88.400	Xiphophorus_maculatus