EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000010869 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5706 bases
Position: chrPEQF01098098.1:43276-48981
Accession: 111651418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000013648	MMR_HSR1	PF01926.23	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000014152	-	1881	XM_023401369	ENSSLDP00000013648	626 (aa)	XP_023257137	-

Gene Model

Click here to download ENSSLDG00000010869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000010869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000010869	lsg1	50	33.014	ENSSLDG00000012278	gnl3l	59	33.014

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000010869	lsg1	99	64.231	ENSG00000041802	LSG1	90	77.640	Homo_sapiens
ENSSLDG00000010869	lsg1	100	82.938	ENSAPOG00000009694	lsg1	99	83.871	Acanthochromis_polyacanthus
ENSSLDG00000010869	lsg1	100	62.879	ENSAMEG00000009343	LSG1	98	62.980	Ailuropoda_melanoleuca
ENSSLDG00000010869	lsg1	98	85.089	ENSACIG00000012406	lsg1	98	85.089	Amphilophus_citrinellus
ENSSLDG00000010869	lsg1	100	81.073	ENSAOCG00000016066	lsg1	99	83.092	Amphiprion_ocellaris
ENSSLDG00000010869	lsg1	100	81.546	ENSAPEG00000003252	lsg1	99	82.931	Amphiprion_percula
ENSSLDG00000010869	lsg1	98	86.174	ENSATEG00000011794	lsg1	98	86.817	Anabas_testudineus
ENSSLDG00000010869	lsg1	95	61.600	ENSACAG00000004222	LSG1	100	62.400	Anolis_carolinensis
ENSSLDG00000010869	lsg1	99	64.384	ENSANAG00000021153	LSG1	98	65.062	Aotus_nancymaae
ENSSLDG00000010869	lsg1	100	83.103	ENSACLG00000000520	lsg1	98	83.072	Astatotilapia_calliptera
ENSSLDG00000010869	lsg1	100	72.936	ENSAMXG00000008271	lsg1	98	74.566	Astyanax_mexicanus
ENSSLDG00000010869	lsg1	99	64.286	ENSBTAG00000008461	LSG1	98	65.361	Bos_taurus
ENSSLDG00000010869	lsg1	84	35.955	WBGene00016907	C53H9.2	73	35.950	Caenorhabditis_elegans
ENSSLDG00000010869	lsg1	99	64.384	ENSCJAG00000013962	LSG1	98	64.907	Callithrix_jacchus
ENSSLDG00000010869	lsg1	95	65.495	ENSCAFG00000013445	LSG1	100	65.397	Canis_familiaris
ENSSLDG00000010869	lsg1	100	64.545	ENSCAFG00020002216	LSG1	99	65.176	Canis_lupus_dingo
ENSSLDG00000010869	lsg1	100	65.244	ENSCHIG00000015769	LSG1	98	66.876	Capra_hircus
ENSSLDG00000010869	lsg1	99	63.982	ENSTSYG00000001447	LSG1	98	64.031	Carlito_syrichta
ENSSLDG00000010869	lsg1	95	65.296	ENSCAPG00000009856	LSG1	99	66.722	Cavia_aperea
ENSSLDG00000010869	lsg1	99	63.775	ENSCCAG00000035744	LSG1	98	64.043	Cebus_capucinus
ENSSLDG00000010869	lsg1	99	64.079	ENSCATG00000042060	LSG1	98	62.848	Cercocebus_atys
ENSSLDG00000010869	lsg1	99	64.286	ENSCSAG00000008796	LSG1	90	63.777	Chlorocebus_sabaeus
ENSSLDG00000010869	lsg1	100	65.909	ENSCPBG00000015941	LSG1	82	65.533	Chrysemys_picta_bellii
ENSSLDG00000010869	lsg1	84	48.387	ENSCING00000007079	-	95	58.673	Ciona_intestinalis
ENSSLDG00000010869	lsg1	84	48.577	ENSCSAVG00000002514	-	98	48.337	Ciona_savignyi
ENSSLDG00000010869	lsg1	99	63.623	ENSCANG00000030709	LSG1	98	64.130	Colobus_angolensis_palliatus
ENSSLDG00000010869	lsg1	99	64.760	ENSCGRG00001019846	Lsg1	98	65.446	Cricetulus_griseus_chok1gshd
ENSSLDG00000010869	lsg1	99	64.760	ENSCGRG00000014617	Lsg1	98	64.734	Cricetulus_griseus_crigri
ENSSLDG00000010869	lsg1	98	81.440	ENSCSEG00000008522	lsg1	98	81.440	Cynoglossus_semilaevis
ENSSLDG00000010869	lsg1	97	80.261	ENSCVAG00000002484	lsg1	98	81.006	Cyprinodon_variegatus
ENSSLDG00000010869	lsg1	100	75.659	ENSDARG00000015352	lsg1	98	75.714	Danio_rerio
ENSSLDG00000010869	lsg1	99	63.110	ENSDNOG00000006224	LSG1	98	62.712	Dasypus_novemcinctus
ENSSLDG00000010869	lsg1	99	49.369	FBgn0266284	Ns3	98	49.275	Drosophila_melanogaster
ENSSLDG00000010869	lsg1	88	74.667	ENSETEG00000003888	LSG1	87	79.032	Echinops_telfairi
ENSSLDG00000010869	lsg1	88	56.799	ENSEBUG00000003119	lsg1	85	56.799	Eptatretus_burgeri
ENSSLDG00000010869	lsg1	99	65.099	ENSEASG00005000678	LSG1	98	64.769	Equus_asinus_asinus
ENSSLDG00000010869	lsg1	99	64.947	ENSECAG00000017659	LSG1	98	64.769	Equus_caballus
ENSSLDG00000010869	lsg1	86	59.829	ENSEEUG00000015217	LSG1	85	59.829	Erinaceus_europaeus
ENSSLDG00000010869	lsg1	100	72.543	ENSELUG00000023973	lsg1	98	72.611	Esox_lucius
ENSSLDG00000010869	lsg1	100	63.514	ENSFCAG00000024957	LSG1	98	64.154	Felis_catus
ENSSLDG00000010869	lsg1	92	62.662	ENSFALG00000007210	LSG1	94	62.987	Ficedula_albicollis
ENSSLDG00000010869	lsg1	99	64.286	ENSFDAG00000017373	LSG1	98	65.127	Fukomys_damarensis
ENSSLDG00000010869	lsg1	97	80.578	ENSFHEG00000003680	lsg1	98	80.671	Fundulus_heteroclitus
ENSSLDG00000010869	lsg1	98	69.823	ENSGMOG00000015834	lsg1	98	70.240	Gadus_morhua
ENSSLDG00000010869	lsg1	99	60.514	ENSGALG00000007058	LSG1	86	60.957	Gallus_gallus
ENSSLDG00000010869	lsg1	97	81.463	ENSGAFG00000015831	lsg1	98	81.392	Gambusia_affinis
ENSSLDG00000010869	lsg1	98	82.051	ENSGACG00000009323	lsg1	98	82.051	Gasterosteus_aculeatus
ENSSLDG00000010869	lsg1	99	63.927	ENSGGOG00000000520	LSG1	98	64.286	Gorilla_gorilla
ENSSLDG00000010869	lsg1	100	84.292	ENSHBUG00000005659	lsg1	98	84.286	Haplochromis_burtoni
ENSSLDG00000010869	lsg1	99	63.850	ENSHGLG00000017390	LSG1	98	64.696	Heterocephalus_glaber_female
ENSSLDG00000010869	lsg1	99	63.850	ENSHGLG00100018587	LSG1	98	64.696	Heterocephalus_glaber_male
ENSSLDG00000010869	lsg1	97	81.440	ENSHCOG00000016848	lsg1	98	81.369	Hippocampus_comes
ENSSLDG00000010869	lsg1	100	75.791	ENSIPUG00000008631	lsg1	98	76.252	Ictalurus_punctatus
ENSSLDG00000010869	lsg1	75	58.116	ENSSTOG00000010234	LSG1	92	58.847	Ictidomys_tridecemlineatus
ENSSLDG00000010869	lsg1	99	66.197	ENSJJAG00000015513	Lsg1	98	66.613	Jaculus_jaculus
ENSSLDG00000010869	lsg1	98	80.421	ENSKMAG00000009681	lsg1	98	80.421	Kryptolebias_marmoratus
ENSSLDG00000010869	lsg1	98	84.202	ENSLBEG00000024261	lsg1	98	84.202	Labrus_bergylta
ENSSLDG00000010869	lsg1	100	66.717	ENSLACG00000013399	LSG1	98	67.127	Latimeria_chalumnae
ENSSLDG00000010869	lsg1	98	73.270	ENSLOCG00000004918	lsg1	98	73.585	Lepisosteus_oculatus
ENSSLDG00000010869	lsg1	99	64.031	ENSLAFG00000012919	-	98	64.623	Loxodonta_africana
ENSSLDG00000010869	lsg1	99	63.927	ENSMFAG00000039903	LSG1	98	62.693	Macaca_fascicularis
ENSSLDG00000010869	lsg1	99	63.927	ENSMMUG00000010708	LSG1	98	63.932	Macaca_mulatta
ENSSLDG00000010869	lsg1	99	63.927	ENSMNEG00000031538	LSG1	98	62.693	Macaca_nemestrina
ENSSLDG00000010869	lsg1	99	63.775	ENSMLEG00000041184	LSG1	98	63.932	Mandrillus_leucophaeus
ENSSLDG00000010869	lsg1	100	85.238	ENSMAMG00000000470	lsg1	98	85.737	Mastacembelus_armatus
ENSSLDG00000010869	lsg1	100	84.292	ENSMZEG00005017865	lsg1	98	84.286	Maylandia_zebra
ENSSLDG00000010869	lsg1	88	61.840	ENSMGAG00000007050	LSG1	99	62.395	Meleagris_gallopavo
ENSSLDG00000010869	lsg1	91	63.761	ENSMAUG00000016976	Lsg1	90	64.675	Mesocricetus_auratus
ENSSLDG00000010869	lsg1	99	63.526	ENSMICG00000049087	LSG1	98	64.341	Microcebus_murinus
ENSSLDG00000010869	lsg1	99	64.660	ENSMOCG00000022136	Lsg1	98	65.197	Microtus_ochrogaster
ENSSLDG00000010869	lsg1	88	91.667	ENSMMOG00000008884	lsg1	98	79.316	Mola_mola
ENSSLDG00000010869	lsg1	99	56.454	ENSMODG00000019828	LSG1	98	55.814	Monodelphis_domestica
ENSSLDG00000010869	lsg1	100	65.789	MGP_CAROLIEiJ_G0020648	Lsg1	98	66.877	Mus_caroli
ENSSLDG00000010869	lsg1	100	65.688	ENSMUSG00000022538	Lsg1	98	66.246	Mus_musculus
ENSSLDG00000010869	lsg1	98	65.367	MGP_PahariEiJ_G0016352	Lsg1	98	65.566	Mus_pahari
ENSSLDG00000010869	lsg1	100	65.789	MGP_SPRETEiJ_G0021544	Lsg1	98	66.193	Mus_spretus
ENSSLDG00000010869	lsg1	100	63.126	ENSMPUG00000003734	LSG1	98	63.622	Mustela_putorius_furo
ENSSLDG00000010869	lsg1	100	63.102	ENSMLUG00000012548	LSG1	98	65.123	Myotis_lucifugus
ENSSLDG00000010869	lsg1	99	64.596	ENSNGAG00000021872	Lsg1	98	64.025	Nannospalax_galili
ENSSLDG00000010869	lsg1	99	64.536	ENSNLEG00000008293	LSG1	98	64.907	Nomascus_leucogenys
ENSSLDG00000010869	lsg1	69	72.165	ENSMEUG00000009041	-	84	72.165	Notamacropus_eugenii
ENSSLDG00000010869	lsg1	100	83.617	ENSONIG00000002635	lsg1	98	84.094	Oreochromis_niloticus
ENSSLDG00000010869	lsg1	95	66.505	ENSOANG00000012742	LSG1	99	66.505	Ornithorhynchus_anatinus
ENSSLDG00000010869	lsg1	99	64.286	ENSOCUG00000004817	LSG1	98	65.023	Oryctolagus_cuniculus
ENSSLDG00000010869	lsg1	98	81.759	ENSORLG00000007695	lsg1	98	81.596	Oryzias_latipes
ENSSLDG00000010869	lsg1	98	82.276	ENSORLG00020016286	lsg1	98	82.276	Oryzias_latipes_hni
ENSSLDG00000010869	lsg1	98	80.456	ENSORLG00015012025	lsg1	98	80.456	Oryzias_latipes_hsok
ENSSLDG00000010869	lsg1	98	80.000	ENSOMEG00000022379	lsg1	98	80.325	Oryzias_melastigma
ENSSLDG00000010869	lsg1	99	63.843	ENSOGAG00000003475	LSG1	98	63.735	Otolemur_garnettii
ENSSLDG00000010869	lsg1	100	63.102	ENSOARG00000020403	LSG1	98	65.116	Ovis_aries
ENSSLDG00000010869	lsg1	99	64.297	ENSPPAG00000029271	LSG1	98	64.043	Pan_paniscus
ENSSLDG00000010869	lsg1	100	63.150	ENSPPRG00000010281	LSG1	98	64.067	Panthera_pardus
ENSSLDG00000010869	lsg1	100	63.514	ENSPTIG00000010789	LSG1	98	64.451	Panthera_tigris_altaica
ENSSLDG00000010869	lsg1	99	64.145	ENSPTRG00000015760	LSG1	98	63.889	Pan_troglodytes
ENSSLDG00000010869	lsg1	99	63.775	ENSPANG00000018249	LSG1	98	62.539	Papio_anubis
ENSSLDG00000010869	lsg1	99	72.327	ENSPKIG00000002895	lsg1	98	73.955	Paramormyrops_kingsleyae
ENSSLDG00000010869	lsg1	96	63.507	ENSPSIG00000009821	LSG1	99	63.507	Pelodiscus_sinensis
ENSSLDG00000010869	lsg1	95	80.100	ENSPMGG00000000931	lsg1	100	80.100	Periophthalmus_magnuspinnatus
ENSSLDG00000010869	lsg1	99	63.788	ENSPEMG00000012082	-	98	64.099	Peromyscus_maniculatus_bairdii
ENSSLDG00000010869	lsg1	99	60.060	ENSPMAG00000007451	lsg1	98	60.030	Petromyzon_marinus
ENSSLDG00000010869	lsg1	98	65.263	ENSPCIG00000013890	LSG1	80	65.263	Phascolarctos_cinereus
ENSSLDG00000010869	lsg1	97	80.738	ENSPFOG00000021882	lsg1	98	80.671	Poecilia_formosa
ENSSLDG00000010869	lsg1	97	80.096	ENSPLAG00000019536	lsg1	98	80.032	Poecilia_latipinna
ENSSLDG00000010869	lsg1	97	79.680	ENSPMEG00000017281	lsg1	98	79.777	Poecilia_mexicana
ENSSLDG00000010869	lsg1	97	70.000	ENSPREG00000006048	lsg1	98	70.142	Poecilia_reticulata
ENSSLDG00000010869	lsg1	92	62.479	ENSPPYG00000014425	LSG1	98	62.500	Pongo_abelii
ENSSLDG00000010869	lsg1	89	72.000	ENSPCAG00000005511	LSG1	79	77.419	Procavia_capensis
ENSSLDG00000010869	lsg1	99	63.374	ENSPCOG00000012360	LSG1	98	64.186	Propithecus_coquereli
ENSSLDG00000010869	lsg1	100	83.103	ENSPNYG00000021994	lsg1	98	83.072	Pundamilia_nyererei
ENSSLDG00000010869	lsg1	100	75.894	ENSPNAG00000015533	lsg1	98	76.032	Pygocentrus_nattereri
ENSSLDG00000010869	lsg1	100	63.969	ENSRNOG00000001727	Lsg1	98	64.823	Rattus_norvegicus
ENSSLDG00000010869	lsg1	99	63.720	ENSRBIG00000029053	LSG1	98	63.608	Rhinopithecus_bieti
ENSSLDG00000010869	lsg1	99	63.720	ENSRROG00000037702	LSG1	98	63.608	Rhinopithecus_roxellana
ENSSLDG00000010869	lsg1	84	40.182	YGL099W	LSG1	73	41.699	Saccharomyces_cerevisiae
ENSSLDG00000010869	lsg1	99	64.384	ENSSBOG00000034938	LSG1	98	64.969	Saimiri_boliviensis_boliviensis
ENSSLDG00000010869	lsg1	77	61.686	ENSSHAG00000003487	LSG1	100	62.188	Sarcophilus_harrisii
ENSSLDG00000010869	lsg1	98	73.968	ENSSFOG00015008955	lsg1	98	74.881	Scleropages_formosus
ENSSLDG00000010869	lsg1	100	95.794	ENSSDUG00000004622	lsg1	100	95.794	Seriola_dumerili
ENSSLDG00000010869	lsg1	83	64.809	ENSSARG00000012981	LSG1	82	63.536	Sorex_araneus
ENSSLDG00000010869	lsg1	100	65.000	ENSSPUG00000016347	LSG1	98	64.551	Sphenodon_punctatus
ENSSLDG00000010869	lsg1	100	80.952	ENSSPAG00000005508	lsg1	99	82.010	Stegastes_partitus
ENSSLDG00000010869	lsg1	100	64.341	ENSSSCG00000011827	LSG1	98	64.082	Sus_scrofa
ENSSLDG00000010869	lsg1	88	61.345	ENSTGUG00000009068	LSG1	100	61.513	Taeniopygia_guttata
ENSSLDG00000010869	lsg1	97	76.077	ENSTRUG00000017380	lsg1	98	76.190	Takifugu_rubripes
ENSSLDG00000010869	lsg1	97	79.014	ENSTNIG00000015570	lsg1	98	79.272	Tetraodon_nigroviridis
ENSSLDG00000010869	lsg1	91	70.000	ENSTTRG00000000559	LSG1	89	70.000	Tursiops_truncatus
ENSSLDG00000010869	lsg1	100	63.126	ENSUAMG00000012454	LSG1	98	63.538	Ursus_americanus
ENSSLDG00000010869	lsg1	100	63.126	ENSUMAG00000000855	LSG1	98	63.538	Ursus_maritimus
ENSSLDG00000010869	lsg1	95	61.600	ENSVPAG00000012400	LSG1	100	61.600	Vicugna_pacos
ENSSLDG00000010869	lsg1	95	64.904	ENSVVUG00000008956	LSG1	98	64.075	Vulpes_vulpes
ENSSLDG00000010869	lsg1	100	68.558	ENSXETG00000003451	lsg1	98	68.232	Xenopus_tropicalis
ENSSLDG00000010869	lsg1	97	79.904	ENSXCOG00000003239	lsg1	98	80.000	Xiphophorus_couchianus
ENSSLDG00000010869	lsg1	97	79.871	ENSXMAG00000005536	lsg1	98	79.808	Xiphophorus_maculatus