EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000011534 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 35744 bases
Position: chrPEQF01099256.1:631544-667287
Accession: 111669131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000014428	RRM_1	PF00076.22	8.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000014983	-	1731	XM_023425371	ENSSLDP00000014428	292 (aa)	XP_023281139	UPI000C6F741E

Gene Model

Click here to download ENSSLDG00000011534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000011534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000011534	-	95	49.301	ENSSLDG00000007454	-	86	47.387
ENSSLDG00000011534	-	82	59.336	ENSSLDG00000017872	raly	95	53.220
ENSSLDG00000011534	-	100	72.727	ENSSLDG00000020603	-	100	72.635
ENSSLDG00000011534	-	75	54.425	ENSSLDG00000007474	-	92	50.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000011534	-	100	95.890	ENSAPOG00000008744	-	100	95.890	Acanthochromis_polyacanthus
ENSSLDG00000011534	-	97	86.598	ENSACIG00000007143	-	97	86.598	Amphilophus_citrinellus
ENSSLDG00000011534	-	100	73.649	ENSAOCG00000001605	-	100	73.649	Amphiprion_ocellaris
ENSSLDG00000011534	-	100	98.630	ENSAOCG00000023599	-	100	98.630	Amphiprion_ocellaris
ENSSLDG00000011534	-	82	74.895	ENSATEG00000023356	-	91	74.895	Anabas_testudineus
ENSSLDG00000011534	-	97	86.102	ENSATEG00000022219	-	93	90.508	Anabas_testudineus
ENSSLDG00000011534	-	100	96.918	ENSACLG00000011720	-	100	96.918	Astatotilapia_calliptera
ENSSLDG00000011534	-	100	72.635	ENSACLG00000006949	-	100	72.635	Astatotilapia_calliptera
ENSSLDG00000011534	-	100	72.635	ENSAMXG00000019031	-	100	72.635	Astyanax_mexicanus
ENSSLDG00000011534	-	100	63.973	ENSAMXG00000032617	-	100	64.646	Astyanax_mexicanus
ENSSLDG00000011534	-	100	83.219	ENSCSEG00000014237	-	100	83.219	Cynoglossus_semilaevis
ENSSLDG00000011534	-	100	73.311	ENSCVAG00000018104	-	100	73.649	Cyprinodon_variegatus
ENSSLDG00000011534	-	100	94.521	ENSCVAG00000013624	-	100	94.521	Cyprinodon_variegatus
ENSSLDG00000011534	-	59	77.193	ENSDARG00000090292	ralyl	81	80.247	Danio_rerio
ENSSLDG00000011534	-	93	63.273	ENSELUG00000001702	-	96	63.082	Esox_lucius
ENSSLDG00000011534	-	57	73.939	ENSGMOG00000005914	-	100	73.939	Gadus_morhua
ENSSLDG00000011534	-	61	79.775	ENSGACG00000004991	-	91	83.735	Gasterosteus_aculeatus
ENSSLDG00000011534	-	100	97.260	ENSHBUG00000010040	-	100	97.260	Haplochromis_burtoni
ENSSLDG00000011534	-	100	72.635	ENSHBUG00000015412	-	100	72.635	Haplochromis_burtoni
ENSSLDG00000011534	-	100	72.973	ENSIPUG00000000507	ralyl	100	73.649	Ictalurus_punctatus
ENSSLDG00000011534	-	100	72.973	ENSKMAG00000018155	-	100	73.986	Kryptolebias_marmoratus
ENSSLDG00000011534	-	100	91.096	ENSKMAG00000022093	-	100	91.781	Kryptolebias_marmoratus
ENSSLDG00000011534	-	100	91.781	ENSLBEG00000012873	-	100	91.781	Labrus_bergylta
ENSSLDG00000011534	-	100	71.284	ENSLBEG00000011011	-	100	72.635	Labrus_bergylta
ENSSLDG00000011534	-	100	69.932	ENSLOCG00000012787	ralyl	99	68.919	Lepisosteus_oculatus
ENSSLDG00000011534	-	99	90.000	ENSMAMG00000001723	-	97	90.000	Mastacembelus_armatus
ENSSLDG00000011534	-	100	96.918	ENSMZEG00005024447	-	100	96.918	Maylandia_zebra
ENSSLDG00000011534	-	98	70.169	ENSMZEG00005018748	-	99	70.508	Maylandia_zebra
ENSSLDG00000011534	-	97	86.149	ENSMMOG00000020441	-	86	88.514	Mola_mola
ENSSLDG00000011534	-	100	95.205	ENSMALG00000019019	-	78	95.205	Monopterus_albus
ENSSLDG00000011534	-	100	71.959	ENSMALG00000012952	-	100	71.959	Monopterus_albus
ENSSLDG00000011534	-	98	70.508	ENSNBRG00000011376	-	99	70.508	Neolamprologus_brichardi
ENSSLDG00000011534	-	97	85.911	ENSNBRG00000011206	-	97	85.911	Neolamprologus_brichardi
ENSSLDG00000011534	-	100	73.649	ENSORLG00000012719	-	100	73.649	Oryzias_latipes
ENSSLDG00000011534	-	100	89.726	ENSORLG00000017934	-	100	89.384	Oryzias_latipes
ENSSLDG00000011534	-	100	73.649	ENSORLG00020004438	-	100	73.649	Oryzias_latipes_hni
ENSSLDG00000011534	-	100	88.699	ENSORLG00020000082	-	100	88.356	Oryzias_latipes_hni
ENSSLDG00000011534	-	100	89.041	ENSORLG00015004280	-	100	88.699	Oryzias_latipes_hsok
ENSSLDG00000011534	-	100	73.649	ENSORLG00015004727	-	100	73.649	Oryzias_latipes_hsok
ENSSLDG00000011534	-	100	88.699	ENSOMEG00000011821	-	100	88.699	Oryzias_melastigma
ENSSLDG00000011534	-	100	73.649	ENSOMEG00000001170	-	100	73.649	Oryzias_melastigma
ENSSLDG00000011534	-	100	73.720	ENSPKIG00000015926	-	100	73.720	Paramormyrops_kingsleyae
ENSSLDG00000011534	-	78	68.240	ENSPMGG00000014481	-	95	70.259	Periophthalmus_magnuspinnatus
ENSSLDG00000011534	-	99	76.351	ENSPMGG00000009532	-	99	74.662	Periophthalmus_magnuspinnatus
ENSSLDG00000011534	-	97	89.456	ENSPFOG00000006120	-	99	89.456	Poecilia_formosa
ENSSLDG00000011534	-	97	85.211	ENSPLAG00000009877	-	76	84.615	Poecilia_latipinna
ENSSLDG00000011534	-	97	72.759	ENSPLAG00000011323	ralyl	100	72.759	Poecilia_latipinna
ENSSLDG00000011534	-	97	72.759	ENSPMEG00000023847	ralyl	100	72.759	Poecilia_mexicana
ENSSLDG00000011534	-	97	85.211	ENSPMEG00000013624	-	80	84.615	Poecilia_mexicana
ENSSLDG00000011534	-	97	93.993	ENSPREG00000013805	-	100	88.141	Poecilia_reticulata
ENSSLDG00000011534	-	97	71.379	ENSPREG00000001956	ralyl	100	71.379	Poecilia_reticulata
ENSSLDG00000011534	-	97	85.911	ENSPNYG00000008772	-	97	85.911	Pundamilia_nyererei
ENSSLDG00000011534	-	98	70.169	ENSPNYG00000003548	-	99	70.508	Pundamilia_nyererei
ENSSLDG00000011534	-	100	72.297	ENSPNAG00000000498	-	88	72.054	Pygocentrus_nattereri
ENSSLDG00000011534	-	100	68.601	ENSPNAG00000026098	-	100	68.601	Pygocentrus_nattereri
ENSSLDG00000011534	-	97	65.035	ENSSFOG00015004575	-	96	65.385	Scleropages_formosus
ENSSLDG00000011534	-	100	74.662	ENSSFOG00015009401	-	100	74.662	Scleropages_formosus
ENSSLDG00000011534	-	100	72.297	ENSSMAG00000005608	-	100	73.401	Scophthalmus_maximus
ENSSLDG00000011534	-	97	90.526	ENSSMAG00000015907	-	93	90.526	Scophthalmus_maximus
ENSSLDG00000011534	-	100	99.658	ENSSDUG00000012473	-	100	99.658	Seriola_dumerili
ENSSLDG00000011534	-	100	73.311	ENSSDUG00000007587	-	100	73.311	Seriola_dumerili
ENSSLDG00000011534	-	97	80.919	ENSSPAG00000013858	-	96	78.767	Stegastes_partitus
ENSSLDG00000011534	-	97	89.753	ENSTRUG00000003829	-	95	87.279	Takifugu_rubripes
ENSSLDG00000011534	-	97	84.694	ENSTNIG00000005594	-	99	84.694	Tetraodon_nigroviridis
ENSSLDG00000011534	-	100	64.430	ENSXETG00000017729	ralyl	99	65.101	Xenopus_tropicalis
ENSSLDG00000011534	-	97	70.470	ENSXCOG00000015156	-	93	70.470	Xiphophorus_couchianus
ENSSLDG00000011534	-	100	73.986	ENSXMAG00000008396	-	100	73.986	Xiphophorus_maculatus
ENSSLDG00000011534	-	100	94.178	ENSXMAG00000007614	-	100	94.178	Xiphophorus_maculatus