EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000011597 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2200 bases
Position: chrPEQF01094759.1:412173-414372
Accession: 111649239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000014513	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000015072	-	612	XM_023398989	ENSSLDP00000014513	203 (aa)	XP_023254757	-

Gene Model

Click here to download ENSSLDG00000011597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000011597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000011597	si:dkey-13a21.4	81	32.335	ENSSLDG00000015143	dnajc27	61	32.335
ENSSLDG00000011597	si:dkey-13a21.4	73	31.373	ENSSLDG00000013333	si:cabz01085950.1	73	31.373
ENSSLDG00000011597	si:dkey-13a21.4	82	38.922	ENSSLDG00000006014	rab18b	80	38.922
ENSSLDG00000011597	si:dkey-13a21.4	92	34.555	ENSSLDG00000012474	rab6bb	89	34.555
ENSSLDG00000011597	si:dkey-13a21.4	90	55.676	ENSSLDG00000024959	-	89	55.676
ENSSLDG00000011597	si:dkey-13a21.4	96	33.831	ENSSLDG00000015289	-	94	33.831
ENSSLDG00000011597	si:dkey-13a21.4	77	39.241	ENSSLDG00000020438	rab22a	79	39.241
ENSSLDG00000011597	si:dkey-13a21.4	77	37.736	ENSSLDG00000012091	rab25b	75	37.736
ENSSLDG00000011597	si:dkey-13a21.4	79	37.037	ENSSLDG00000012251	rab1ba	79	37.037
ENSSLDG00000011597	si:dkey-13a21.4	86	33.898	ENSSLDG00000023317	rab15	81	33.898
ENSSLDG00000011597	si:dkey-13a21.4	87	37.640	ENSSLDG00000015823	-	87	37.640
ENSSLDG00000011597	si:dkey-13a21.4	79	34.969	ENSSLDG00000017771	rab5c	72	34.969
ENSSLDG00000011597	si:dkey-13a21.4	77	35.404	ENSSLDG00000012116	rab11al	72	35.404
ENSSLDG00000011597	si:dkey-13a21.4	96	35.500	ENSSLDG00000022282	rab41	92	35.500
ENSSLDG00000011597	si:dkey-13a21.4	75	41.026	ENSSLDG00000019214	zgc:101559	65	41.026
ENSSLDG00000011597	si:dkey-13a21.4	86	32.203	ENSSLDG00000021984	RAB15	82	32.203
ENSSLDG00000011597	si:dkey-13a21.4	71	30.345	ENSSLDG00000022168	kras	81	30.769
ENSSLDG00000011597	si:dkey-13a21.4	77	40.252	ENSSLDG00000006360	RAB39B	73	40.252
ENSSLDG00000011597	si:dkey-13a21.4	85	34.857	ENSSLDG00000005718	-	80	34.857
ENSSLDG00000011597	si:dkey-13a21.4	82	52.976	ENSSLDG00000009351	rab9b	83	52.976
ENSSLDG00000011597	si:dkey-13a21.4	99	34.300	ENSSLDG00000000287	rab23	86	34.300
ENSSLDG00000011597	si:dkey-13a21.4	79	31.707	ENSSLDG00000025169	rhebl1	86	31.707
ENSSLDG00000011597	si:dkey-13a21.4	74	31.288	ENSSLDG00000003489	rasl11a	61	31.288
ENSSLDG00000011597	si:dkey-13a21.4	63	35.938	ENSSLDG00000020918	RAB17	55	35.938
ENSSLDG00000011597	si:dkey-13a21.4	85	34.286	ENSSLDG00000010503	rab14	80	34.286
ENSSLDG00000011597	si:dkey-13a21.4	72	36.000	ENSSLDG00000014812	rab34b	72	36.000
ENSSLDG00000011597	si:dkey-13a21.4	77	34.161	ENSSLDG00000020676	rab11bb	71	34.161
ENSSLDG00000011597	si:dkey-13a21.4	81	38.690	ENSSLDG00000022239	rab12	68	38.690
ENSSLDG00000011597	si:dkey-13a21.4	90	55.676	ENSSLDG00000012391	RAB7A	89	55.676
ENSSLDG00000011597	si:dkey-13a21.4	87	36.612	ENSSLDG00000006977	rab18a	88	36.612
ENSSLDG00000011597	si:dkey-13a21.4	77	38.608	ENSSLDG00000018024	zgc:171927	72	38.608
ENSSLDG00000011597	si:dkey-13a21.4	83	38.596	ENSSLDG00000003631	si:dkey-16l2.16	73	40.506
ENSSLDG00000011597	si:dkey-13a21.4	96	34.826	ENSSLDG00000003264	rab6ba	94	34.826
ENSSLDG00000011597	si:dkey-13a21.4	78	34.375	ENSSLDG00000009725	-	76	34.375
ENSSLDG00000011597	si:dkey-13a21.4	81	50.602	ENSSLDG00000004352	-	78	50.602
ENSSLDG00000011597	si:dkey-13a21.4	79	37.423	ENSSLDG00000022555	rab2a	75	37.423
ENSSLDG00000011597	si:dkey-13a21.4	82	32.948	ENSSLDG00000021833	si:ch73-116o1.2	80	32.948
ENSSLDG00000011597	si:dkey-13a21.4	77	38.750	ENSSLDG00000020354	rab42a	72	38.750
ENSSLDG00000011597	si:dkey-13a21.4	96	37.561	ENSSLDG00000022004	rab33a	71	37.561
ENSSLDG00000011597	si:dkey-13a21.4	93	35.648	ENSSLDG00000008070	-	88	35.648
ENSSLDG00000011597	si:dkey-13a21.4	79	38.272	ENSSLDG00000018942	rab1ab	78	38.272
ENSSLDG00000011597	si:dkey-13a21.4	88	33.880	ENSSLDG00000009573	rab34a	75	33.880
ENSSLDG00000011597	si:dkey-13a21.4	71	31.507	ENSSLDG00000015122	rras2	76	31.847
ENSSLDG00000011597	si:dkey-13a21.4	93	33.505	ENSSLDG00000011069	rab5aa	88	33.505
ENSSLDG00000011597	si:dkey-13a21.4	77	34.161	ENSSLDG00000005275	-	71	34.161
ENSSLDG00000011597	si:dkey-13a21.4	96	30.882	ENSSLDG00000009438	rab11a	93	30.882
ENSSLDG00000011597	si:dkey-13a21.4	79	37.423	ENSSLDG00000008584	rab33ba	74	37.423
ENSSLDG00000011597	si:dkey-13a21.4	77	38.994	ENSSLDG00000009068	-	73	38.994
ENSSLDG00000011597	si:dkey-13a21.4	77	34.591	ENSSLDG00000010880	rab25a	73	34.591
ENSSLDG00000011597	si:dkey-13a21.4	86	40.909	ENSSLDG00000022533	rab30	85	40.909
ENSSLDG00000011597	si:dkey-13a21.4	81	51.205	ENSSLDG00000000773	rab9a	82	51.205
ENSSLDG00000011597	si:dkey-13a21.4	85	34.091	ENSSLDG00000009464	rab36	64	34.091
ENSSLDG00000011597	si:dkey-13a21.4	77	34.161	ENSSLDG00000005221	rab11ba	71	34.161
ENSSLDG00000011597	si:dkey-13a21.4	79	30.488	ENSSLDG00000018681	rheb	86	30.488
ENSSLDG00000011597	si:dkey-13a21.4	77	38.272	ENSSLDG00000002646	si:dkey-34d22.5	72	38.272
ENSSLDG00000011597	si:dkey-13a21.4	81	37.870	ENSSLDG00000011757	-	82	37.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000011597	si:dkey-13a21.4	100	90.686	ENSACIG00000011024	si:dkey-13a21.4	100	90.686	Amphilophus_citrinellus
ENSSLDG00000011597	si:dkey-13a21.4	100	88.235	ENSAOCG00000020491	si:dkey-13a21.4	100	88.235	Amphiprion_ocellaris
ENSSLDG00000011597	si:dkey-13a21.4	100	88.235	ENSAPEG00000023338	si:dkey-13a21.4	92	88.235	Amphiprion_percula
ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	ENSATEG00000014958	si:dkey-13a21.4	100	84.314	Anabas_testudineus
ENSSLDG00000011597	si:dkey-13a21.4	96	53.333	ENSACAG00000012345	-	97	53.333	Anolis_carolinensis
ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	ENSACLG00000021109	si:dkey-13a21.4	99	89.706	Astatotilapia_calliptera
ENSSLDG00000011597	si:dkey-13a21.4	96	54.950	ENSAMXG00000032663	si:dkey-13a21.4	93	54.950	Astyanax_mexicanus
ENSSLDG00000011597	si:dkey-13a21.4	89	56.831	WBGene00004271	rab-7	96	53.500	Caenorhabditis_elegans
ENSSLDG00000011597	si:dkey-13a21.4	100	86.765	ENSCVAG00000001150	si:dkey-13a21.4	100	86.765	Cyprinodon_variegatus
ENSSLDG00000011597	si:dkey-13a21.4	100	62.255	ENSDARG00000026098	si:dkey-13a21.4	99	62.255	Danio_rerio
ENSSLDG00000011597	si:dkey-13a21.4	87	52.778	ENSDNOG00000043559	-	96	50.000	Dasypus_novemcinctus
ENSSLDG00000011597	si:dkey-13a21.4	100	83.902	ENSFHEG00000002502	si:dkey-13a21.4	100	83.902	Fundulus_heteroclitus
ENSSLDG00000011597	si:dkey-13a21.4	100	83.333	ENSGAFG00000020102	si:dkey-13a21.4	100	83.333	Gambusia_affinis
ENSSLDG00000011597	si:dkey-13a21.4	100	90.196	ENSHBUG00000014023	si:dkey-13a21.4	99	90.196	Haplochromis_burtoni
ENSSLDG00000011597	si:dkey-13a21.4	86	80.682	ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	Kryptolebias_marmoratus
ENSSLDG00000011597	si:dkey-13a21.4	100	84.804	ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	Labrus_bergylta
ENSSLDG00000011597	si:dkey-13a21.4	96	60.914	ENSLOCG00000014749	si:dkey-13a21.4	96	60.914	Lepisosteus_oculatus
ENSSLDG00000011597	si:dkey-13a21.4	84	54.386	ENSLAFG00000028984	-	83	54.386	Loxodonta_africana
ENSSLDG00000011597	si:dkey-13a21.4	100	85.294	ENSMAMG00000021095	si:dkey-13a21.4	100	85.294	Mastacembelus_armatus
ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	ENSMZEG00005010220	si:dkey-13a21.4	99	89.706	Maylandia_zebra
ENSSLDG00000011597	si:dkey-13a21.4	99	90.148	ENSNBRG00000023214	si:dkey-13a21.4	99	90.148	Neolamprologus_brichardi
ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	ENSONIG00000020296	si:dkey-13a21.4	100	89.706	Oreochromis_niloticus
ENSSLDG00000011597	si:dkey-13a21.4	100	80.882	ENSORLG00000025098	si:dkey-13a21.4	100	80.882	Oryzias_latipes
ENSSLDG00000011597	si:dkey-13a21.4	100	80.882	ENSORLG00020019465	si:dkey-13a21.4	100	80.882	Oryzias_latipes_hni
ENSSLDG00000011597	si:dkey-13a21.4	100	81.373	ENSORLG00015015121	si:dkey-13a21.4	100	81.373	Oryzias_latipes_hsok
ENSSLDG00000011597	si:dkey-13a21.4	96	64.467	ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	Paramormyrops_kingsleyae
ENSSLDG00000011597	si:dkey-13a21.4	99	76.733	ENSPMGG00000023170	si:dkey-13a21.4	96	76.733	Periophthalmus_magnuspinnatus
ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	ENSPFOG00000015409	si:dkey-13a21.4	100	84.314	Poecilia_formosa
ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	ENSPLAG00000019688	si:dkey-13a21.4	100	84.314	Poecilia_latipinna
ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	ENSPMEG00000019159	si:dkey-13a21.4	100	84.314	Poecilia_mexicana
ENSSLDG00000011597	si:dkey-13a21.4	100	82.843	ENSPREG00000022241	si:dkey-13a21.4	100	82.843	Poecilia_reticulata
ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	ENSPNYG00000018613	si:dkey-13a21.4	99	89.706	Pundamilia_nyererei
ENSSLDG00000011597	si:dkey-13a21.4	100	46.667	YML001W	YPT7	100	46.667	Saccharomyces_cerevisiae
ENSSLDG00000011597	si:dkey-13a21.4	96	62.755	ENSSFOG00015009566	si:dkey-13a21.4	96	62.755	Scleropages_formosus
ENSSLDG00000011597	si:dkey-13a21.4	97	86.869	ENSSMAG00000013945	si:dkey-13a21.4	96	86.869	Scophthalmus_maximus
ENSSLDG00000011597	si:dkey-13a21.4	100	97.059	ENSSDUG00000019738	si:dkey-13a21.4	100	97.059	Seriola_dumerili
ENSSLDG00000011597	si:dkey-13a21.4	96	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis