EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000011684 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6349 bases
Position: chrPEQF01099167.1:645418-651766
Accession: 111667344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000014613	tRNA_Me_trans	PF03054.16	7.4e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000015178	-	4210	XM_023423028	ENSSLDP00000014613	416 (aa)	XP_023278796	UPI000C6FBE00

Gene Model

Click here to download ENSSLDG00000011684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000011684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000011684	trmu	99	71.014	ENSG00000100416	TRMU	99	78.571	Homo_sapiens
ENSSLDG00000011684	trmu	100	89.688	ENSAPOG00000014458	trmu	100	89.688	Acanthochromis_polyacanthus
ENSSLDG00000011684	trmu	96	72.070	ENSAMEG00000003319	TRMU	96	72.070	Ailuropoda_melanoleuca
ENSSLDG00000011684	trmu	100	87.019	ENSACIG00000002101	trmu	100	87.019	Amphilophus_citrinellus
ENSSLDG00000011684	trmu	100	90.408	ENSAOCG00000013155	trmu	100	90.408	Amphiprion_ocellaris
ENSSLDG00000011684	trmu	100	90.168	ENSAPEG00000013350	trmu	100	90.168	Amphiprion_percula
ENSSLDG00000011684	trmu	100	86.298	ENSATEG00000007814	trmu	100	86.298	Anabas_testudineus
ENSSLDG00000011684	trmu	94	70.694	ENSAPLG00000016380	TRMU	99	70.694	Anas_platyrhynchos
ENSSLDG00000011684	trmu	95	72.152	ENSACAG00000007720	TRMU	95	72.152	Anolis_carolinensis
ENSSLDG00000011684	trmu	100	71.154	ENSANAG00000038053	TRMU	98	71.154	Aotus_nancymaae
ENSSLDG00000011684	trmu	100	88.462	ENSACLG00000005395	trmu	100	88.462	Astatotilapia_calliptera
ENSSLDG00000011684	trmu	99	78.537	ENSAMXG00000005282	trmu	99	78.537	Astyanax_mexicanus
ENSSLDG00000011684	trmu	99	70.361	ENSBTAG00000005595	TRMU	99	70.361	Bos_taurus
ENSSLDG00000011684	trmu	91	41.432	WBGene00007114	mttu-1	98	41.432	Caenorhabditis_elegans
ENSSLDG00000011684	trmu	99	69.807	ENSCJAG00000000198	TRMU	98	69.807	Callithrix_jacchus
ENSSLDG00000011684	trmu	100	70.433	ENSCAFG00000000779	TRMU	98	70.264	Canis_familiaris
ENSSLDG00000011684	trmu	100	70.433	ENSCAFG00020009184	TRMU	98	70.264	Canis_lupus_dingo
ENSSLDG00000011684	trmu	100	70.743	ENSCHIG00000017074	TRMU	100	70.743	Capra_hircus
ENSSLDG00000011684	trmu	96	72.319	ENSTSYG00000003853	TRMU	95	72.319	Carlito_syrichta
ENSSLDG00000011684	trmu	94	66.504	ENSCAPG00000013034	TRMU	96	66.504	Cavia_aperea
ENSSLDG00000011684	trmu	97	70.968	ENSCPOG00000020780	TRMU	96	70.968	Cavia_porcellus
ENSSLDG00000011684	trmu	99	70.218	ENSCCAG00000021641	TRMU	98	70.218	Cebus_capucinus
ENSSLDG00000011684	trmu	96	72.682	ENSCATG00000032800	TRMU	95	72.682	Cercocebus_atys
ENSSLDG00000011684	trmu	98	71.078	ENSCLAG00000017269	TRMU	97	71.078	Chinchilla_lanigera
ENSSLDG00000011684	trmu	99	71.014	ENSCSAG00000005279	TRMU	98	71.014	Chlorocebus_sabaeus
ENSSLDG00000011684	trmu	89	71.774	ENSCPBG00000011621	TRMU	93	71.774	Chrysemys_picta_bellii
ENSSLDG00000011684	trmu	94	47.328	ENSCING00000019371	-	96	47.328	Ciona_intestinalis
ENSSLDG00000011684	trmu	99	70.531	ENSCANG00000041645	TRMU	98	70.531	Colobus_angolensis_palliatus
ENSSLDG00000011684	trmu	97	69.630	ENSCGRG00001001739	Trmu	97	69.630	Cricetulus_griseus_chok1gshd
ENSSLDG00000011684	trmu	97	64.444	ENSCGRG00000002781	Trmu	97	64.444	Cricetulus_griseus_crigri
ENSSLDG00000011684	trmu	99	82.850	ENSCSEG00000012382	trmu	99	82.850	Cynoglossus_semilaevis
ENSSLDG00000011684	trmu	100	86.779	ENSCVAG00000001366	trmu	100	86.779	Cyprinodon_variegatus
ENSSLDG00000011684	trmu	100	74.279	ENSDARG00000043734	trmu	100	74.279	Danio_rerio
ENSSLDG00000011684	trmu	64	58.209	ENSDNOG00000047245	-	98	56.786	Dasypus_novemcinctus
ENSSLDG00000011684	trmu	96	72.180	ENSDORG00000007455	Trmu	97	72.180	Dipodomys_ordii
ENSSLDG00000011684	trmu	93	43.636	FBgn0040337	CG3021	95	43.636	Drosophila_melanogaster
ENSSLDG00000011684	trmu	94	56.489	ENSEBUG00000007454	trmu	100	55.620	Eptatretus_burgeri
ENSSLDG00000011684	trmu	97	71.605	ENSEASG00005021725	TRMU	96	71.605	Equus_asinus_asinus
ENSSLDG00000011684	trmu	97	71.605	ENSECAG00000000467	TRMU	96	71.605	Equus_caballus
ENSSLDG00000011684	trmu	69	54.196	ENSEEUG00000000074	-	68	54.196	Erinaceus_europaeus
ENSSLDG00000011684	trmu	100	79.376	ENSELUG00000009464	trmu	99	81.793	Esox_lucius
ENSSLDG00000011684	trmu	96	72.682	ENSFCAG00000006533	TRMU	98	70.673	Felis_catus
ENSSLDG00000011684	trmu	94	70.277	ENSFALG00000010035	TRMU	100	70.277	Ficedula_albicollis
ENSSLDG00000011684	trmu	91	69.474	ENSFDAG00000017472	TRMU	97	69.474	Fukomys_damarensis
ENSSLDG00000011684	trmu	100	86.538	ENSFHEG00000003162	trmu	100	86.538	Fundulus_heteroclitus
ENSSLDG00000011684	trmu	97	72.727	ENSGMOG00000001323	trmu	100	72.727	Gadus_morhua
ENSSLDG00000011684	trmu	95	73.201	ENSGALG00000031922	TRMU	95	73.201	Gallus_gallus
ENSSLDG00000011684	trmu	98	87.775	ENSGAFG00000013331	trmu	98	87.775	Gambusia_affinis
ENSSLDG00000011684	trmu	100	85.579	ENSGACG00000019024	trmu	100	85.579	Gasterosteus_aculeatus
ENSSLDG00000011684	trmu	99	71.014	ENSGGOG00000000203	TRMU	98	71.014	Gorilla_gorilla
ENSSLDG00000011684	trmu	100	87.981	ENSHBUG00000023421	trmu	100	87.981	Haplochromis_burtoni
ENSSLDG00000011684	trmu	99	69.712	ENSHGLG00000009278	TRMU	99	69.712	Heterocephalus_glaber_female
ENSSLDG00000011684	trmu	99	69.712	ENSHGLG00100018863	TRMU	99	69.712	Heterocephalus_glaber_male
ENSSLDG00000011684	trmu	99	85.060	ENSHCOG00000013459	trmu	99	85.060	Hippocampus_comes
ENSSLDG00000011684	trmu	97	79.208	ENSIPUG00000009785	trmu	99	79.208	Ictalurus_punctatus
ENSSLDG00000011684	trmu	99	71.117	ENSSTOG00000010993	TRMU	98	71.117	Ictidomys_tridecemlineatus
ENSSLDG00000011684	trmu	99	69.305	ENSJJAG00000000667	Trmu	100	69.305	Jaculus_jaculus
ENSSLDG00000011684	trmu	100	84.856	ENSKMAG00000008516	trmu	100	84.856	Kryptolebias_marmoratus
ENSSLDG00000011684	trmu	100	87.019	ENSLBEG00000018831	trmu	100	87.019	Labrus_bergylta
ENSSLDG00000011684	trmu	99	74.699	ENSLACG00000013713	TRMU	99	74.699	Latimeria_chalumnae
ENSSLDG00000011684	trmu	96	79.750	ENSLOCG00000016066	trmu	96	79.750	Lepisosteus_oculatus
ENSSLDG00000011684	trmu	96	63.861	ENSLAFG00000005129	TRMU	96	63.861	Loxodonta_africana
ENSSLDG00000011684	trmu	99	71.256	ENSMFAG00000039767	TRMU	98	71.256	Macaca_fascicularis
ENSSLDG00000011684	trmu	99	71.256	ENSMMUG00000000807	TRMU	98	71.256	Macaca_mulatta
ENSSLDG00000011684	trmu	99	71.256	ENSMNEG00000028164	TRMU	98	71.256	Macaca_nemestrina
ENSSLDG00000011684	trmu	96	72.682	ENSMLEG00000033884	TRMU	95	72.682	Mandrillus_leucophaeus
ENSSLDG00000011684	trmu	100	87.981	ENSMAMG00000004717	trmu	100	87.981	Mastacembelus_armatus
ENSSLDG00000011684	trmu	100	88.462	ENSMZEG00005015797	trmu	100	88.462	Maylandia_zebra
ENSSLDG00000011684	trmu	76	71.779	ENSMGAG00000007550	TRMU	95	71.779	Meleagris_gallopavo
ENSSLDG00000011684	trmu	96	70.426	ENSMAUG00000022282	Trmu	96	70.426	Mesocricetus_auratus
ENSSLDG00000011684	trmu	95	72.152	ENSMICG00000029046	TRMU	96	72.152	Microcebus_murinus
ENSSLDG00000011684	trmu	96	71.178	ENSMOCG00000014641	Trmu	96	71.178	Microtus_ochrogaster
ENSSLDG00000011684	trmu	100	83.654	ENSMMOG00000007229	trmu	100	83.654	Mola_mola
ENSSLDG00000011684	trmu	97	66.093	ENSMODG00000007433	TRMU	95	66.093	Monodelphis_domestica
ENSSLDG00000011684	trmu	100	87.740	ENSMALG00000007721	trmu	100	87.740	Monopterus_albus
ENSSLDG00000011684	trmu	97	69.630	MGP_CAROLIEiJ_G0020134	Trmu	97	69.630	Mus_caroli
ENSSLDG00000011684	trmu	100	68.585	ENSMUSG00000022386	Trmu	100	68.585	Mus_musculus
ENSSLDG00000011684	trmu	100	68.345	MGP_PahariEiJ_G0020139	Trmu	100	68.345	Mus_pahari
ENSSLDG00000011684	trmu	100	68.585	MGP_SPRETEiJ_G0021031	Trmu	100	68.585	Mus_spretus
ENSSLDG00000011684	trmu	99	70.361	ENSMPUG00000002523	TRMU	98	70.361	Mustela_putorius_furo
ENSSLDG00000011684	trmu	99	70.290	ENSNGAG00000005132	Trmu	99	70.290	Nannospalax_galili
ENSSLDG00000011684	trmu	100	87.981	ENSNBRG00000022690	trmu	100	87.981	Neolamprologus_brichardi
ENSSLDG00000011684	trmu	97	72.346	ENSNLEG00000015773	TRMU	96	72.346	Nomascus_leucogenys
ENSSLDG00000011684	trmu	79	58.716	ENSMEUG00000000216	TRMU	99	58.716	Notamacropus_eugenii
ENSSLDG00000011684	trmu	99	69.784	ENSODEG00000014745	TRMU	100	69.784	Octodon_degus
ENSSLDG00000011684	trmu	100	88.462	ENSONIG00000009821	trmu	100	88.462	Oreochromis_niloticus
ENSSLDG00000011684	trmu	93	65.128	ENSOANG00000001891	TRMU	99	65.128	Ornithorhynchus_anatinus
ENSSLDG00000011684	trmu	91	70.899	ENSOCUG00000003664	TRMU	95	69.697	Oryctolagus_cuniculus
ENSSLDG00000011684	trmu	99	82.892	ENSORLG00000019015	trmu	99	82.892	Oryzias_latipes
ENSSLDG00000011684	trmu	99	83.373	ENSORLG00020006830	trmu	99	83.373	Oryzias_latipes_hni
ENSSLDG00000011684	trmu	99	83.373	ENSORLG00015003907	trmu	99	83.373	Oryzias_latipes_hsok
ENSSLDG00000011684	trmu	58	84.298	ENSOMEG00000015541	trmu	86	84.298	Oryzias_melastigma
ENSSLDG00000011684	trmu	97	71.111	ENSOGAG00000008096	TRMU	97	71.111	Otolemur_garnettii
ENSSLDG00000011684	trmu	91	69.474	ENSOARG00000019475	TRMU	93	69.474	Ovis_aries
ENSSLDG00000011684	trmu	99	71.014	ENSPPAG00000033944	TRMU	98	71.014	Pan_paniscus
ENSSLDG00000011684	trmu	96	72.932	ENSPPRG00000004197	TRMU	95	72.932	Panthera_pardus
ENSSLDG00000011684	trmu	67	72.924	ENSPTIG00000014122	TRMU	97	74.621	Panthera_tigris_altaica
ENSSLDG00000011684	trmu	99	71.014	ENSPTRG00000014510	TRMU	98	71.014	Pan_troglodytes
ENSSLDG00000011684	trmu	95	72.911	ENSPANG00000023074	TRMU	97	69.863	Papio_anubis
ENSSLDG00000011684	trmu	100	75.962	ENSPKIG00000002849	trmu	100	75.962	Paramormyrops_kingsleyae
ENSSLDG00000011684	trmu	92	70.235	ENSPSIG00000013020	TRMU	100	70.235	Pelodiscus_sinensis
ENSSLDG00000011684	trmu	100	83.894	ENSPMGG00000004083	trmu	100	83.894	Periophthalmus_magnuspinnatus
ENSSLDG00000011684	trmu	100	68.990	ENSPEMG00000014007	Trmu	98	68.990	Peromyscus_maniculatus_bairdii
ENSSLDG00000011684	trmu	94	67.263	ENSPCIG00000009923	TRMU	97	65.060	Phascolarctos_cinereus
ENSSLDG00000011684	trmu	97	82.716	ENSPFOG00000008197	trmu	91	82.716	Poecilia_formosa
ENSSLDG00000011684	trmu	99	86.265	ENSPLAG00000008414	trmu	99	86.265	Poecilia_latipinna
ENSSLDG00000011684	trmu	100	86.538	ENSPMEG00000004326	trmu	100	86.538	Poecilia_mexicana
ENSSLDG00000011684	trmu	99	87.229	ENSPREG00000007980	trmu	99	87.229	Poecilia_reticulata
ENSSLDG00000011684	trmu	99	71.739	ENSPPYG00000011949	TRMU	98	71.739	Pongo_abelii
ENSSLDG00000011684	trmu	93	63.239	ENSPCAG00000013462	TRMU	100	63.239	Procavia_capensis
ENSSLDG00000011684	trmu	96	70.823	ENSPCOG00000016539	TRMU	96	70.823	Propithecus_coquereli
ENSSLDG00000011684	trmu	96	65.835	ENSPVAG00000013202	TRMU	99	64.649	Pteropus_vampyrus
ENSSLDG00000011684	trmu	100	87.981	ENSPNYG00000005629	trmu	100	87.981	Pundamilia_nyererei
ENSSLDG00000011684	trmu	99	78.102	ENSPNAG00000006339	trmu	96	78.102	Pygocentrus_nattereri
ENSSLDG00000011684	trmu	100	68.825	ENSRNOG00000016465	Trmu	100	68.825	Rattus_norvegicus
ENSSLDG00000011684	trmu	99	70.048	ENSRBIG00000038973	TRMU	98	70.048	Rhinopithecus_bieti
ENSSLDG00000011684	trmu	99	70.290	ENSRROG00000004267	TRMU	98	70.290	Rhinopithecus_roxellana
ENSSLDG00000011684	trmu	91	33.831	YDL033C	SLM3	91	33.831	Saccharomyces_cerevisiae
ENSSLDG00000011684	trmu	99	70.361	ENSSBOG00000030184	TRMU	99	70.361	Saimiri_boliviensis_boliviensis
ENSSLDG00000011684	trmu	91	73.158	ENSSFOG00015020664	trmu	99	73.158	Scleropages_formosus
ENSSLDG00000011684	trmu	100	89.183	ENSSMAG00000019450	trmu	100	89.183	Scophthalmus_maximus
ENSSLDG00000011684	trmu	100	99.760	ENSSDUG00000011913	trmu	100	99.760	Seriola_dumerili
ENSSLDG00000011684	trmu	99	59.662	ENSSPUG00000017123	TRMU	98	59.662	Sphenodon_punctatus
ENSSLDG00000011684	trmu	100	86.779	ENSSPAG00000021875	trmu	100	86.779	Stegastes_partitus
ENSSLDG00000011684	trmu	97	71.111	ENSSSCG00000000007	TRMU	99	69.690	Sus_scrofa
ENSSLDG00000011684	trmu	89	73.190	ENSTGUG00000003663	-	100	73.190	Taeniopygia_guttata
ENSSLDG00000011684	trmu	99	86.683	ENSTRUG00000001231	trmu	100	86.683	Takifugu_rubripes
ENSSLDG00000011684	trmu	99	85.372	ENSTNIG00000010484	trmu	98	85.372	Tetraodon_nigroviridis
ENSSLDG00000011684	trmu	72	55.556	ENSTBEG00000011276	-	77	55.556	Tupaia_belangeri
ENSSLDG00000011684	trmu	96	72.932	ENSTTRG00000004160	TRMU	95	72.932	Tursiops_truncatus
ENSSLDG00000011684	trmu	71	73.559	ENSUAMG00000024825	TRMU	98	73.559	Ursus_americanus
ENSSLDG00000011684	trmu	95	60.705	ENSUMAG00000019079	TRMU	98	73.462	Ursus_maritimus
ENSSLDG00000011684	trmu	53	63.014	ENSVPAG00000000685	-	100	63.014	Vicugna_pacos
ENSSLDG00000011684	trmu	100	69.952	ENSVVUG00000024963	TRMU	98	69.952	Vulpes_vulpes
ENSSLDG00000011684	trmu	97	73.645	ENSXETG00000023304	trmu	95	73.645	Xenopus_tropicalis
ENSSLDG00000011684	trmu	99	85.885	ENSXCOG00000015105	trmu	99	85.885	Xiphophorus_couchianus
ENSSLDG00000011684	trmu	99	87.711	ENSXMAG00000006697	trmu	99	87.711	Xiphophorus_maculatus