EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000011706 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1710 bases
Position: chrPEQF01099343.1:305135-306844
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000014653	SM-ATX	PF14438.6	7.5e-10	1	1
ENSSLDP00000014653	LSM14	PF12701.7	6.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000015219	-	279	-	ENSSLDP00000014653	92 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000011706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000011706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000011706	-	90	72.289	ENSSLDG00000011341	-	90	72.289
ENSSLDG00000011706	-	90	72.289	ENSSLDG00000012686	-	90	72.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000011706	-	87	61.250	ENSAPOG00000009997	-	74	61.250	Acanthochromis_polyacanthus
ENSSLDG00000011706	-	91	65.476	ENSACIG00000003134	-	68	65.476	Amphilophus_citrinellus
ENSSLDG00000011706	-	87	63.750	ENSAPEG00000013779	-	79	63.750	Amphiprion_percula
ENSSLDG00000011706	-	87	72.500	ENSATEG00000015882	-	91	72.500	Anabas_testudineus
ENSSLDG00000011706	-	92	65.882	ENSCVAG00000012411	-	88	65.882	Cyprinodon_variegatus
ENSSLDG00000011706	-	96	90.909	ENSCVAG00000005570	-	89	90.909	Cyprinodon_variegatus
ENSSLDG00000011706	-	92	62.353	ENSGAFG00000013718	-	88	62.353	Gambusia_affinis
ENSSLDG00000011706	-	96	93.182	ENSHBUG00000011864	-	65	93.182	Haplochromis_burtoni
ENSSLDG00000011706	-	88	66.667	ENSHBUG00000012323	-	77	66.667	Haplochromis_burtoni
ENSSLDG00000011706	-	96	85.227	ENSHCOG00000004862	-	81	85.227	Hippocampus_comes
ENSSLDG00000011706	-	96	61.053	ENSKMAG00000012850	-	99	61.053	Kryptolebias_marmoratus
ENSSLDG00000011706	-	90	63.855	ENSKMAG00000016674	-	75	63.855	Kryptolebias_marmoratus
ENSSLDG00000011706	-	88	69.136	ENSLBEG00000007971	-	78	69.136	Labrus_bergylta
ENSSLDG00000011706	-	90	97.590	ENSLBEG00000016427	lsm14b	58	97.590	Labrus_bergylta
ENSSLDG00000011706	-	95	82.759	ENSNGAG00000016305	-	70	82.759	Nannospalax_galili
ENSSLDG00000011706	-	88	67.901	ENSNBRG00000022370	-	77	67.901	Neolamprologus_brichardi
ENSSLDG00000011706	-	96	94.318	ENSNBRG00000022606	-	65	94.318	Neolamprologus_brichardi
ENSSLDG00000011706	-	95	65.517	ENSORLG00020018184	-	89	65.517	Oryzias_latipes_hni
ENSSLDG00000011706	-	86	68.354	ENSOMEG00000007241	-	95	68.354	Oryzias_melastigma
ENSSLDG00000011706	-	92	80.000	ENSPKIG00000003275	lsm14b	79	80.000	Paramormyrops_kingsleyae
ENSSLDG00000011706	-	91	94.048	ENSPMGG00000014569	lsm14b	53	94.048	Periophthalmus_magnuspinnatus
ENSSLDG00000011706	-	87	58.750	ENSPMGG00000004595	-	81	58.750	Periophthalmus_magnuspinnatus
ENSSLDG00000011706	-	89	65.854	ENSPREG00000007817	-	94	65.854	Poecilia_reticulata
ENSSLDG00000011706	-	91	91.667	ENSPREG00000016484	-	55	91.667	Poecilia_reticulata
ENSSLDG00000011706	-	96	93.182	ENSPNYG00000019601	-	65	93.182	Pundamilia_nyererei
ENSSLDG00000011706	-	88	66.667	ENSPNYG00000021706	-	76	66.667	Pundamilia_nyererei
ENSSLDG00000011706	-	87	63.750	ENSSPAG00000018837	-	79	63.750	Stegastes_partitus
ENSSLDG00000011706	-	96	89.773	ENSXCOG00000017365	-	89	89.773	Xiphophorus_couchianus
ENSSLDG00000011706	-	97	61.798	ENSXCOG00000011423	-	98	61.798	Xiphophorus_couchianus
ENSSLDG00000011706	-	97	61.798	ENSXMAG00000015481	-	98	61.798	Xiphophorus_maculatus