EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000011806 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
33037 bases
Position
chrPEQF01098728.1:438439-471475
Accession
111653873
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000014852tRNA_anti-codonPF01336.252.6e-1211
ENSSLDP00000014815tRNA_anti-codonPF01336.252.8e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000015420-1743-ENSSLDP00000014852580 (aa)--
ENSSLDT00000015383-3940XM_023404597ENSSLDP00000014815600 (aa)XP_023260365UPI000C6FB7B7
Gene Model
Click here to download ENSSLDG00000011806's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000011806's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000011806rpa19271.528ENSSLDG00000020784RPA19171.233
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000011806rpa19569.683ENSAPOG00000019409RPA18469.683Acanthochromis_polyacanthus
ENSSLDG00000011806rpa110089.000ENSAPOG00000011658rpa110089.000Acanthochromis_polyacanthus
ENSSLDG00000011806rpa19665.767ENSAMEG00000007706RPA19665.767Ailuropoda_melanoleuca
ENSSLDG00000011806rpa19562.521ENSACIG00000012881RPA19962.521Amphilophus_citrinellus
ENSSLDG00000011806rpa19680.416ENSACIG00000007277rpa19980.416Amphilophus_citrinellus
ENSSLDG00000011806rpa19959.259ENSAOCG00000009003RPA19959.535Amphiprion_ocellaris
ENSSLDG00000011806rpa110089.000ENSAOCG00000023376rpa110089.000Amphiprion_ocellaris
ENSSLDG00000011806rpa110089.333ENSAPEG00000008634rpa110089.333Amphiprion_percula
ENSSLDG00000011806rpa19670.495ENSAPEG00000019132RPA18970.495Amphiprion_percula
ENSSLDG00000011806rpa19590.265ENSATEG00000022024rpa110090.265Anabas_testudineus
ENSSLDG00000011806rpa19960.433ENSATEG00000006443RPA19960.433Anabas_testudineus
ENSSLDG00000011806rpa19654.436ENSAPLG00000012442RPA19955.188Anas_platyrhynchos
ENSSLDG00000011806rpa19958.872ENSACAG00000014490RPA19859.536Anolis_carolinensis
ENSSLDG00000011806rpa19667.145ENSANAG00000023456RPA19767.145Aotus_nancymaae
ENSSLDG00000011806rpa19961.890ENSACLG00000005223RPA19961.890Astatotilapia_calliptera
ENSSLDG00000011806rpa19489.189ENSACLG00000006640rpa19989.189Astatotilapia_calliptera
ENSSLDG00000011806rpa19979.000ENSAMXG00000008418rpa19981.183Astyanax_mexicanus
ENSSLDG00000011806rpa19963.993ENSBTAG00000009711RPA19963.993Bos_taurus
ENSSLDG00000011806rpa18531.128WBGene00017546rpa-17631.128Caenorhabditis_elegans
ENSSLDG00000011806rpa19962.541ENSCJAG00000001848RPA19963.295Callithrix_jacchus
ENSSLDG00000011806rpa19964.975ENSCAFG00000019249RPA19965.303Canis_familiaris
ENSSLDG00000011806rpa19964.975ENSCAFG00020009847RPA19965.303Canis_lupus_dingo
ENSSLDG00000011806rpa19964.157ENSCHIG00000026308RPA19964.321Capra_hircus
ENSSLDG00000011806rpa19963.562ENSTSYG00000003482-9963.562Carlito_syrichta
ENSSLDG00000011806rpa19964.111ENSCPOG00000000035RPA19964.111Cavia_porcellus
ENSSLDG00000011806rpa19953.257ENSCCAG00000010981RPA19953.997Cebus_capucinus
ENSSLDG00000011806rpa19963.785ENSCLAG00000005185-9963.785Chinchilla_lanigera
ENSSLDG00000011806rpa19960.294ENSCLAG00000015045-9960.294Chinchilla_lanigera
ENSSLDG00000011806rpa19954.486ENSCSAG00000013833RPA19954.649Chlorocebus_sabaeus
ENSSLDG00000011806rpa19663.605ENSCHOG00000013540-9963.605Choloepus_hoffmanni
ENSSLDG00000011806rpa17571.789ENSCHOG00000009454-9971.789Choloepus_hoffmanni
ENSSLDG00000011806rpa19963.502ENSCPBG00000020377RPA19964.386Chrysemys_picta_bellii
ENSSLDG00000011806rpa19943.802ENSCING00000023482-9943.802Ciona_intestinalis
ENSSLDG00000011806rpa19667.742ENSCANG00000030911RPA19767.742Colobus_angolensis_palliatus
ENSSLDG00000011806rpa19963.785ENSCGRG00001008197Rpa19963.948Cricetulus_griseus_chok1gshd
ENSSLDG00000011806rpa17870.419ENSCGRG00000000582Rpa19965.613Cricetulus_griseus_crigri
ENSSLDG00000011806rpa19954.968ENSCSEG00000012726RPA19955.842Cynoglossus_semilaevis
ENSSLDG00000011806rpa110080.560ENSCSEG00000013066rpa110080.560Cynoglossus_semilaevis
ENSSLDG00000011806rpa110084.818ENSCVAG00000019431rpa110084.818Cyprinodon_variegatus
ENSSLDG00000011806rpa19271.360ENSCVAG00000013446-8071.360Cyprinodon_variegatus
ENSSLDG00000011806rpa19976.667ENSDARG00000003938rpa19976.667Danio_rerio
ENSSLDG00000011806rpa19765.430ENSDNOG00000017218RPA19665.430Dasypus_novemcinctus
ENSSLDG00000011806rpa19964.157ENSDORG00000006199Rpa19964.321Dipodomys_ordii
ENSSLDG00000011806rpa19941.721FBgn0010173RpA-709942.258Drosophila_melanogaster
ENSSLDG00000011806rpa18272.165ENSETEG00000017608RPA18272.165Echinops_telfairi
ENSSLDG00000011806rpa19567.446ENSEASG00005009372RPA19967.269Equus_asinus_asinus
ENSSLDG00000011806rpa19964.321ENSECAG00000023886RPA19964.484Equus_caballus
ENSSLDG00000011806rpa17271.838ENSEEUG00000002186-6871.838Erinaceus_europaeus
ENSSLDG00000011806rpa19981.023ENSELUG00000021071rpa19981.023Esox_lucius
ENSSLDG00000011806rpa18864.162ENSELUG00000006136RPA19964.162Esox_lucius
ENSSLDG00000011806rpa19964.007ENSFCAG00000006306RPA19964.007Felis_catus
ENSSLDG00000011806rpa19962.193ENSFALG00000006575RPA19962.193Ficedula_albicollis
ENSSLDG00000011806rpa19965.033ENSFDAG00000007720RPA19965.033Fukomys_damarensis
ENSSLDG00000011806rpa110084.628ENSFHEG00000003580rpa110084.628Fundulus_heteroclitus
ENSSLDG00000011806rpa19978.356ENSGMOG00000010382rpa19978.356Gadus_morhua
ENSSLDG00000011806rpa19961.678ENSGALG00000003072RPA19961.678Gallus_gallus
ENSSLDG00000011806rpa19958.537ENSGAFG00000020953RPA19958.626Gambusia_affinis
ENSSLDG00000011806rpa110084.692ENSGAFG00000012916rpa110084.692Gambusia_affinis
ENSSLDG00000011806rpa110085.075ENSGACG00000010856rpa110085.075Gasterosteus_aculeatus
ENSSLDG00000011806rpa19963.175ENSGAGG00000013611RPA19963.175Gopherus_agassizii
ENSSLDG00000011806rpa19964.333ENSGGOG00000014186RPA19964.333Gorilla_gorilla
ENSSLDG00000011806rpa19991.167ENSHBUG00000017773rpa19991.167Haplochromis_burtoni
ENSSLDG00000011806rpa19659.646ENSHBUG00000009348RPA19959.646Haplochromis_burtoni
ENSSLDG00000011806rpa19964.542ENSHGLG00000008846RPA19964.706Heterocephalus_glaber_female
ENSSLDG00000011806rpa19960.294ENSHGLG00100000799-9960.294Heterocephalus_glaber_male
ENSSLDG00000011806rpa19964.542ENSHGLG00100017755-9964.706Heterocephalus_glaber_male
ENSSLDG00000011806rpa19954.560ENSHGLG00100002005-9954.812Heterocephalus_glaber_male
ENSSLDG00000011806rpa110075.530ENSHCOG00000001401rpa110075.530Hippocampus_comes
ENSSLDG00000011806rpa19944.020ENSHCOG00000000351RPA19843.802Hippocampus_comes
ENSSLDG00000011806rpa19977.980ENSIPUG00000004400rpa19977.980Ictalurus_punctatus
ENSSLDG00000011806rpa19660.368ENSSTOG00000022475RPA19960.368Ictidomys_tridecemlineatus
ENSSLDG00000011806rpa19665.541ENSJJAG00000000876Rpa19865.541Jaculus_jaculus
ENSSLDG00000011806rpa110081.997ENSKMAG00000005605rpa110082.131Kryptolebias_marmoratus
ENSSLDG00000011806rpa19960.826ENSKMAG00000000234RPA19960.826Kryptolebias_marmoratus
ENSSLDG00000011806rpa19869.074ENSLBEG00000002281RPA18469.074Labrus_bergylta
ENSSLDG00000011806rpa19985.430ENSLBEG00000021604rpa19985.430Labrus_bergylta
ENSSLDG00000011806rpa18163.347ENSLACG00000007210RPA19962.168Latimeria_chalumnae
ENSSLDG00000011806rpa19972.772ENSLOCG00000006397rpa19972.937Lepisosteus_oculatus
ENSSLDG00000011806rpa19962.742ENSLAFG00000015354RPA19962.742Loxodonta_africana
ENSSLDG00000011806rpa18063.636ENSMFAG00000036138-9863.636Macaca_fascicularis
ENSSLDG00000011806rpa19964.309ENSMMUG00000011604-9964.309Macaca_mulatta
ENSSLDG00000011806rpa19959.704ENSMMUG00000002442-9959.704Macaca_mulatta
ENSSLDG00000011806rpa19659.213ENSMNEG00000029837-9766.376Macaca_nemestrina
ENSSLDG00000011806rpa19963.235ENSMNEG00000031632-9963.235Macaca_nemestrina
ENSSLDG00000011806rpa19661.745ENSMLEG00000038768-9861.745Mandrillus_leucophaeus
ENSSLDG00000011806rpa110091.167ENSMAMG00000017993rpa110091.167Mastacembelus_armatus
ENSSLDG00000011806rpa19871.163ENSMAMG00000020097RPA19169.752Mastacembelus_armatus
ENSSLDG00000011806rpa19961.890ENSMZEG00005024731RPA19961.890Maylandia_zebra
ENSSLDG00000011806rpa19990.833ENSMZEG00005007551rpa19990.833Maylandia_zebra
ENSSLDG00000011806rpa19960.992ENSMGAG00000005315RPA19860.992Meleagris_gallopavo
ENSSLDG00000011806rpa19665.085ENSMAUG00000010474Rpa19865.424Mesocricetus_auratus
ENSSLDG00000011806rpa19964.262ENSMICG00000012867RPA19964.262Microcebus_murinus
ENSSLDG00000011806rpa19964.204ENSMOCG00000013019Rpa19964.204Microtus_ochrogaster
ENSSLDG00000011806rpa110085.167ENSMMOG00000014292rpa110087.241Mola_mola
ENSSLDG00000011806rpa19862.542ENSMMOG00000010868RPA19862.542Mola_mola
ENSSLDG00000011806rpa19962.745ENSMODG00000010549RPA19962.745Monodelphis_domestica
ENSSLDG00000011806rpa19969.369ENSMALG00000001208RPA18769.369Monopterus_albus
ENSSLDG00000011806rpa110090.500ENSMALG00000011453rpa110090.500Monopterus_albus
ENSSLDG00000011806rpa19963.622MGP_CAROLIEiJ_G0016734Rpa19963.622Mus_caroli
ENSSLDG00000011806rpa19962.621ENSMUSG00000000751Rpa19962.621Mus_musculus
ENSSLDG00000011806rpa19963.740MGP_PahariEiJ_G0017871Rpa19963.844Mus_pahari
ENSSLDG00000011806rpa19962.520MGP_SPRETEiJ_G0017577Rpa19962.520Mus_spretus
ENSSLDG00000011806rpa19964.706ENSMPUG00000013119RPA19964.706Mustela_putorius_furo
ENSSLDG00000011806rpa19963.695ENSMLUG00000006113RPA19963.695Myotis_lucifugus
ENSSLDG00000011806rpa19565.306ENSNGAG00000004522Rpa19465.306Nannospalax_galili
ENSSLDG00000011806rpa19588.948ENSNBRG00000020595rpa19988.948Neolamprologus_brichardi
ENSSLDG00000011806rpa19860.201ENSNBRG00000009672RPA19760.201Neolamprologus_brichardi
ENSSLDG00000011806rpa19964.007ENSNLEG00000017149RPA19963.948Nomascus_leucogenys
ENSSLDG00000011806rpa19654.746ENSMEUG00000006714RPA19754.746Notamacropus_eugenii
ENSSLDG00000011806rpa19961.031ENSODEG00000009038RPA19763.880Octodon_degus
ENSSLDG00000011806rpa19988.889ENSONIG00000013135rpa19988.889Oreochromis_niloticus
ENSSLDG00000011806rpa19864.735ENSOANG00000010880RPA19964.735Ornithorhynchus_anatinus
ENSSLDG00000011806rpa19962.090ENSOCUG00000001504RPA19962.090Oryctolagus_cuniculus
ENSSLDG00000011806rpa19986.455ENSORLG00000004856rpa19986.455Oryzias_latipes
ENSSLDG00000011806rpa19566.376ENSORLG00000003368RPA19166.376Oryzias_latipes
ENSSLDG00000011806rpa19986.789ENSORLG00020008980rpa19986.789Oryzias_latipes_hni
ENSSLDG00000011806rpa19963.983ENSORLG00020015284RPA19163.983Oryzias_latipes_hni
ENSSLDG00000011806rpa19986.789ENSORLG00015013982rpa19986.789Oryzias_latipes_hsok
ENSSLDG00000011806rpa19957.367ENSORLG00015020383RPA19957.367Oryzias_latipes_hsok
ENSSLDG00000011806rpa17167.482ENSORLG00015005867-9566.908Oryzias_latipes_hsok
ENSSLDG00000011806rpa19460.177ENSOMEG00000011040RPA19960.177Oryzias_melastigma
ENSSLDG00000011806rpa19983.612ENSOMEG00000004704rpa19983.612Oryzias_melastigma
ENSSLDG00000011806rpa19963.889ENSOGAG00000005581-9963.889Otolemur_garnettii
ENSSLDG00000011806rpa17574.176ENSOGAG00000029379-9874.176Otolemur_garnettii
ENSSLDG00000011806rpa19964.157ENSOARG00000014479RPA19964.321Ovis_aries
ENSSLDG00000011806rpa19964.169ENSPPAG00000039680RPA19964.111Pan_paniscus
ENSSLDG00000011806rpa19963.844ENSPPRG00000011807RPA19963.844Panthera_pardus
ENSSLDG00000011806rpa19963.844ENSPTIG00000007898RPA19963.844Panthera_tigris_altaica
ENSSLDG00000011806rpa19964.332ENSPTRG00000008539RPA19964.274Pan_troglodytes
ENSSLDG00000011806rpa19964.111ENSPANG00000024592RPA19964.111Papio_anubis
ENSSLDG00000011806rpa19974.917ENSPKIG00000008053rpa19875.702Paramormyrops_kingsleyae
ENSSLDG00000011806rpa19764.020ENSPSIG00000015617RPA19864.020Pelodiscus_sinensis
ENSSLDG00000011806rpa19687.299ENSPMGG00000011589rpa19887.299Periophthalmus_magnuspinnatus
ENSSLDG00000011806rpa19663.327ENSPMGG00000000543RPA19962.791Periophthalmus_magnuspinnatus
ENSSLDG00000011806rpa19965.025ENSPEMG00000021061Rpa19965.025Peromyscus_maniculatus_bairdii
ENSSLDG00000011806rpa19962.418ENSPCIG00000019049RPA19962.582Phascolarctos_cinereus
ENSSLDG00000011806rpa110085.358ENSPFOG00000003987rpa110085.358Poecilia_formosa
ENSSLDG00000011806rpa110085.191ENSPLAG00000004984rpa110085.191Poecilia_latipinna
ENSSLDG00000011806rpa19459.223ENSPLAG00000008844-9659.223Poecilia_latipinna
ENSSLDG00000011806rpa110085.524ENSPMEG00000020602rpa110085.524Poecilia_mexicana
ENSSLDG00000011806rpa19458.454ENSPMEG00000003627-9658.900Poecilia_mexicana
ENSSLDG00000011806rpa19370.655ENSPREG00000010119RPA18570.874Poecilia_reticulata
ENSSLDG00000011806rpa19377.996ENSPREG00000010174rpa19577.857Poecilia_reticulata
ENSSLDG00000011806rpa19963.889ENSPCOG00000001799RPA19963.889Propithecus_coquereli
ENSSLDG00000011806rpa19963.192ENSPVAG00000002149RPA19963.192Pteropus_vampyrus
ENSSLDG00000011806rpa19991.167ENSPNYG00000016316rpa19991.167Pundamilia_nyererei
ENSSLDG00000011806rpa19961.732ENSPNYG00000024165RPA19961.732Pundamilia_nyererei
ENSSLDG00000011806rpa19969.916ENSPNAG00000008599rpa19672.077Pygocentrus_nattereri
ENSSLDG00000011806rpa19670.388ENSRNOG00000003123Rpa19964.860Rattus_norvegicus
ENSSLDG00000011806rpa19963.948ENSRBIG00000036587RPA19963.948Rhinopithecus_bieti
ENSSLDG00000011806rpa19959.054ENSRROG00000043278RPA19959.054Rhinopithecus_roxellana
ENSSLDG00000011806rpa19731.863YAR007CRFA19731.863Saccharomyces_cerevisiae
ENSSLDG00000011806rpa19165.125ENSSBOG00000030233RPA19765.954Saimiri_boliviensis_boliviensis
ENSSLDG00000011806rpa19962.295ENSSHAG00000007969RPA19863.115Sarcophilus_harrisii
ENSSLDG00000011806rpa19980.629ENSSFOG00015005362rpa19280.629Scleropages_formosus
ENSSLDG00000011806rpa19271.396ENSSMAG00000019746RPA19958.143Scophthalmus_maximus
ENSSLDG00000011806rpa110099.310ENSSDUG00000011949rpa110099.310Seriola_dumerili
ENSSLDG00000011806rpa19972.222ENSSDUG00000016358RPA19171.918Seriola_dumerili
ENSSLDG00000011806rpa18672.727ENSSARG00000007506RPA18772.727Sorex_araneus
ENSSLDG00000011806rpa19762.755ENSSPUG00000007223RPA19862.755Sphenodon_punctatus
ENSSLDG00000011806rpa110089.667ENSSPAG00000009903rpa110089.667Stegastes_partitus
ENSSLDG00000011806rpa19963.959ENSSPAG00000011165RPA19864.583Stegastes_partitus
ENSSLDG00000011806rpa19667.684ENSSSCG00000017822RPA19865.372Sus_scrofa
ENSSLDG00000011806rpa19961.576ENSTGUG00000005775RPA19961.576Taeniopygia_guttata
ENSSLDG00000011806rpa19969.860ENSTRUG00000000405RPA18769.005Takifugu_rubripes
ENSSLDG00000011806rpa110085.167ENSTRUG00000003616rpa110085.167Takifugu_rubripes
ENSSLDG00000011806rpa110086.601ENSTNIG00000016199rpa19986.885Tetraodon_nigroviridis
ENSSLDG00000011806rpa17571.591ENSTBEG00000002709RPA17471.591Tupaia_belangeri
ENSSLDG00000011806rpa19963.339ENSTTRG00000001169RPA19963.666Tursiops_truncatus
ENSSLDG00000011806rpa18673.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSSLDG00000011806rpa19964.167ENSUMAG00000009328RPA19964.379Ursus_maritimus
ENSSLDG00000011806rpa19962.171ENSVPAG00000009443RPA19962.171Vicugna_pacos
ENSSLDG00000011806rpa19964.484ENSVVUG00000021715RPA19964.812Vulpes_vulpes
ENSSLDG00000011806rpa19967.208ENSXETG00000013538rpa19968.760Xenopus_tropicalis
ENSSLDG00000011806rpa19562.877ENSXCOG00000009899-9962.877Xiphophorus_couchianus
ENSSLDG00000011806rpa19384.229ENSXCOG00000010068rpa19484.229Xiphophorus_couchianus
ENSSLDG00000011806rpa110084.027ENSXMAG00000004102rpa110084.973Xiphophorus_maculatus
ENSSLDG00000011806rpa19470.429ENSXMAG00000010333RPA18270.429Xiphophorus_maculatus

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