EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012116 (Gene tree)
Gene ID: -
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8941 bases
Position: chrPEQF01098809.1:818817-827757
Accession: 111655704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015214	MMR_HSR1	PF01926.23	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000015789	-	965	XM_023407192	ENSSLDP00000015214	216 (aa)	XP_023262960	UPI000875700B

Gene Model

Click here to download ENSSLDG00000012116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012116	rab11al	69	34.667	ENSSLDG00000022168	kras	85	35.802
ENSSLDG00000012116	rab11al	71	37.267	ENSSLDG00000009464	rab36	58	37.267
ENSSLDG00000012116	rab11al	75	36.646	ENSSLDG00000022282	rab41	76	36.646
ENSSLDG00000012116	rab11al	94	33.971	ENSSLDG00000000773	rab9a	97	33.971
ENSSLDG00000012116	rab11al	54	41.026	ENSSLDG00000014812	rab34b	57	41.026
ENSSLDG00000012116	rab11al	73	42.675	ENSSLDG00000020438	rab22a	81	42.675
ENSSLDG00000012116	rab11al	80	52.023	ENSSLDG00000005718	-	80	52.023
ENSSLDG00000012116	rab11al	79	38.150	ENSSLDG00000019214	zgc:101559	74	38.150
ENSSLDG00000012116	rab11al	98	63.208	ENSSLDG00000010880	rab25a	99	63.208
ENSSLDG00000012116	rab11al	95	47.317	ENSSLDG00000011757	-	99	47.317
ENSSLDG00000012116	rab11al	95	32.727	ENSSLDG00000002646	si:dkey-34d22.5	97	32.727
ENSSLDG00000012116	rab11al	72	35.404	ENSSLDG00000011597	si:dkey-13a21.4	77	35.404
ENSSLDG00000012116	rab11al	95	40.000	ENSSLDG00000020354	rab42a	98	40.000
ENSSLDG00000012116	rab11al	77	54.217	ENSSLDG00000010503	rab14	77	54.217
ENSSLDG00000012116	rab11al	71	32.121	ENSSLDG00000003489	rasl11a	64	32.121
ENSSLDG00000012116	rab11al	93	32.683	ENSSLDG00000012474	rab6bb	93	32.683
ENSSLDG00000012116	rab11al	96	46.860	ENSSLDG00000012251	rab1ba	99	46.860
ENSSLDG00000012116	rab11al	74	42.767	ENSSLDG00000021984	RAB15	75	42.767
ENSSLDG00000012116	rab11al	88	33.158	ENSSLDG00000003264	rab6ba	91	33.158
ENSSLDG00000012116	rab11al	74	49.057	ENSSLDG00000015823	-	80	49.057
ENSSLDG00000012116	rab11al	98	62.559	ENSSLDG00000012091	rab25b	98	62.559
ENSSLDG00000012116	rab11al	72	40.994	ENSSLDG00000009351	rab9b	79	40.994
ENSSLDG00000012116	rab11al	69	35.333	ENSSLDG00000012627	hrasb	85	36.420
ENSSLDG00000012116	rab11al	76	41.818	ENSSLDG00000022239	rab12	84	37.619
ENSSLDG00000012116	rab11al	73	41.104	ENSSLDG00000022004	rab33a	58	41.104
ENSSLDG00000012116	rab11al	81	43.678	ENSSLDG00000003631	si:dkey-16l2.16	98	38.942
ENSSLDG00000012116	rab11al	78	39.306	ENSSLDG00000024959	-	82	39.306
ENSSLDG00000012116	rab11al	99	82.949	ENSSLDG00000005275	-	99	82.949
ENSSLDG00000012116	rab11al	78	42.012	ENSSLDG00000020918	RAB17	74	42.012
ENSSLDG00000012116	rab11al	75	36.747	ENSSLDG00000004352	-	78	36.747
ENSSLDG00000012116	rab11al	92	50.000	ENSSLDG00000022555	rab2a	99	47.685
ENSSLDG00000012116	rab11al	78	33.728	ENSSLDG00000000287	rab23	90	34.043
ENSSLDG00000012116	rab11al	72	76.774	ENSSLDG00000009725	-	76	76.774
ENSSLDG00000012116	rab11al	75	46.296	ENSSLDG00000006014	rab18b	79	46.296
ENSSLDG00000012116	rab11al	75	45.062	ENSSLDG00000006977	rab18a	79	45.062
ENSSLDG00000012116	rab11al	99	82.028	ENSSLDG00000020676	rab11bb	99	82.028
ENSSLDG00000012116	rab11al	99	83.871	ENSSLDG00000005221	rab11ba	99	83.871
ENSSLDG00000012116	rab11al	72	32.278	ENSSLDG00000021833	si:ch73-116o1.2	81	34.118
ENSSLDG00000012116	rab11al	96	47.115	ENSSLDG00000018942	rab1ab	99	47.115
ENSSLDG00000012116	rab11al	93	33.168	ENSSLDG00000015289	-	93	33.168
ENSSLDG00000012116	rab11al	74	46.875	ENSSLDG00000022533	rab30	79	46.875
ENSSLDG00000012116	rab11al	78	39.306	ENSSLDG00000012391	RAB7A	82	39.306
ENSSLDG00000012116	rab11al	67	43.333	ENSSLDG00000008070	-	62	43.333
ENSSLDG00000012116	rab11al	94	42.857	ENSSLDG00000009068	-	97	42.857
ENSSLDG00000012116	rab11al	73	38.125	ENSSLDG00000008584	rab33ba	73	38.125
ENSSLDG00000012116	rab11al	66	31.944	ENSSLDG00000013333	si:cabz01085950.1	71	31.944
ENSSLDG00000012116	rab11al	93	31.280	ENSSLDG00000009573	rab34a	77	31.280
ENSSLDG00000012116	rab11al	53	30.252	ENSSLDG00000017889	arl4cb	60	30.252
ENSSLDG00000012116	rab11al	99	86.047	ENSSLDG00000009438	rab11a	99	86.047
ENSSLDG00000012116	rab11al	74	44.654	ENSSLDG00000023317	rab15	75	44.654
ENSSLDG00000012116	rab11al	74	33.540	ENSSLDG00000018681	rheb	87	33.540
ENSSLDG00000012116	rab11al	96	44.550	ENSSLDG00000018024	zgc:171927	99	44.550
ENSSLDG00000012116	rab11al	73	48.408	ENSSLDG00000017771	rab5c	71	48.408
ENSSLDG00000012116	rab11al	77	47.929	ENSSLDG00000006360	RAB39B	79	47.929
ENSSLDG00000012116	rab11al	73	47.771	ENSSLDG00000011069	rab5aa	73	47.771

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012116	rab11al	100	95.833	ENSAPOG00000008251	rab11al	100	95.833	Acanthochromis_polyacanthus
ENSSLDG00000012116	rab11al	100	98.611	ENSACIG00000017403	rab11al	100	98.611	Amphilophus_citrinellus
ENSSLDG00000012116	rab11al	100	98.611	ENSAOCG00000015678	rab11al	100	98.611	Amphiprion_ocellaris
ENSSLDG00000012116	rab11al	100	98.611	ENSAPEG00000022135	rab11al	100	98.611	Amphiprion_percula
ENSSLDG00000012116	rab11al	100	97.685	ENSATEG00000006156	rab11al	100	97.685	Anabas_testudineus
ENSSLDG00000012116	rab11al	100	98.611	ENSACLG00000010268	rab11al	100	98.611	Astatotilapia_calliptera
ENSSLDG00000012116	rab11al	94	86.700	ENSAMXG00000024632	rab11al	93	86.700	Astyanax_mexicanus
ENSSLDG00000012116	rab11al	94	79.703	ENSCPBG00000025819	-	99	79.703	Chrysemys_picta_bellii
ENSSLDG00000012116	rab11al	100	97.222	ENSCSEG00000011996	rab11al	100	97.222	Cynoglossus_semilaevis
ENSSLDG00000012116	rab11al	100	93.519	ENSCVAG00000020016	rab11al	100	93.519	Cyprinodon_variegatus
ENSSLDG00000012116	rab11al	100	91.667	ENSDARG00000014340	rab11al	100	91.667	Danio_rerio
ENSSLDG00000012116	rab11al	100	93.056	ENSELUG00000012035	rab11al	100	93.056	Esox_lucius
ENSSLDG00000012116	rab11al	99	80.374	ENSFALG00000002594	-	91	80.374	Ficedula_albicollis
ENSSLDG00000012116	rab11al	96	94.712	ENSFHEG00000000832	rab11al	99	94.712	Fundulus_heteroclitus
ENSSLDG00000012116	rab11al	94	89.604	ENSGMOG00000006450	rab11al	100	89.604	Gadus_morhua
ENSSLDG00000012116	rab11al	99	78.140	ENSGALG00000037802	-	50	78.140	Gallus_gallus
ENSSLDG00000012116	rab11al	100	92.593	ENSGAFG00000021725	rab11al	100	92.593	Gambusia_affinis
ENSSLDG00000012116	rab11al	100	99.074	ENSGACG00000013259	rab11al	100	99.074	Gasterosteus_aculeatus
ENSSLDG00000012116	rab11al	99	80.000	ENSGAGG00000020702	-	99	80.000	Gopherus_agassizii
ENSSLDG00000012116	rab11al	100	98.611	ENSHBUG00000009333	rab11al	100	98.611	Haplochromis_burtoni
ENSSLDG00000012116	rab11al	100	96.296	ENSHCOG00000000232	rab11al	100	96.296	Hippocampus_comes
ENSSLDG00000012116	rab11al	100	93.056	ENSIPUG00000006091	RAB11A	100	93.056	Ictalurus_punctatus
ENSSLDG00000012116	rab11al	100	91.667	ENSKMAG00000015516	rab11al	100	91.667	Kryptolebias_marmoratus
ENSSLDG00000012116	rab11al	100	96.296	ENSLBEG00000016417	rab11al	100	96.296	Labrus_bergylta
ENSSLDG00000012116	rab11al	99	79.070	ENSLACG00000011380	rab11al	99	79.070	Latimeria_chalumnae
ENSSLDG00000012116	rab11al	100	93.981	ENSLOCG00000008865	rab11al	100	93.981	Lepisosteus_oculatus
ENSSLDG00000012116	rab11al	100	98.611	ENSMAMG00000010278	rab11al	100	98.611	Mastacembelus_armatus
ENSSLDG00000012116	rab11al	100	98.611	ENSMZEG00005017514	rab11al	100	98.611	Maylandia_zebra
ENSSLDG00000012116	rab11al	75	88.820	ENSMGAG00000004720	-	95	88.820	Meleagris_gallopavo
ENSSLDG00000012116	rab11al	79	97.661	ENSMMOG00000017117	rab11al	84	97.661	Mola_mola
ENSSLDG00000012116	rab11al	100	96.296	ENSMALG00000004093	rab11al	100	96.296	Monopterus_albus
ENSSLDG00000012116	rab11al	100	98.148	ENSNBRG00000005116	rab11al	100	98.148	Neolamprologus_brichardi
ENSSLDG00000012116	rab11al	100	99.074	ENSONIG00000002281	rab11al	100	99.074	Oreochromis_niloticus
ENSSLDG00000012116	rab11al	100	95.833	ENSORLG00000016126	rab11al	100	95.833	Oryzias_latipes
ENSSLDG00000012116	rab11al	100	95.833	ENSORLG00020013747	rab11al	100	95.833	Oryzias_latipes_hni
ENSSLDG00000012116	rab11al	100	95.833	ENSORLG00015019591	rab11al	100	95.833	Oryzias_latipes_hsok
ENSSLDG00000012116	rab11al	100	95.833	ENSOMEG00000020271	rab11al	100	95.833	Oryzias_melastigma
ENSSLDG00000012116	rab11al	100	90.741	ENSPKIG00000020893	rab11al	100	90.741	Paramormyrops_kingsleyae
ENSSLDG00000012116	rab11al	99	78.605	ENSPSIG00000013143	-	99	78.605	Pelodiscus_sinensis
ENSSLDG00000012116	rab11al	100	91.204	ENSPMGG00000004220	rab11al	100	91.204	Periophthalmus_magnuspinnatus
ENSSLDG00000012116	rab11al	100	93.519	ENSPFOG00000011316	rab11al	100	93.519	Poecilia_formosa
ENSSLDG00000012116	rab11al	100	93.519	ENSPLAG00000007986	rab11al	100	93.519	Poecilia_latipinna
ENSSLDG00000012116	rab11al	100	93.519	ENSPMEG00000000804	rab11al	100	93.519	Poecilia_mexicana
ENSSLDG00000012116	rab11al	100	93.519	ENSPREG00000017324	rab11al	100	93.519	Poecilia_reticulata
ENSSLDG00000012116	rab11al	100	98.611	ENSPNYG00000018244	rab11al	100	98.611	Pundamilia_nyererei
ENSSLDG00000012116	rab11al	100	93.056	ENSPNAG00000029085	rab11al	100	93.056	Pygocentrus_nattereri
ENSSLDG00000012116	rab11al	100	92.130	ENSSFOG00015008618	rab11al	100	92.130	Scleropages_formosus
ENSSLDG00000012116	rab11al	100	98.611	ENSSMAG00000016206	rab11al	100	98.611	Scophthalmus_maximus
ENSSLDG00000012116	rab11al	100	100.000	ENSSDUG00000006278	rab11al	100	100.000	Seriola_dumerili
ENSSLDG00000012116	rab11al	98	78.774	ENSSPUG00000002526	-	98	78.774	Sphenodon_punctatus
ENSSLDG00000012116	rab11al	100	97.685	ENSSPAG00000012044	rab11al	100	97.685	Stegastes_partitus
ENSSLDG00000012116	rab11al	94	82.178	ENSTGUG00000003680	-	99	82.178	Taeniopygia_guttata
ENSSLDG00000012116	rab11al	99	95.327	ENSTRUG00000007556	rab11al	99	95.327	Takifugu_rubripes
ENSSLDG00000012116	rab11al	100	92.593	ENSXCOG00000004226	rab11al	100	92.593	Xiphophorus_couchianus
ENSSLDG00000012116	rab11al	100	92.593	ENSXMAG00000027071	rab11al	100	92.593	Xiphophorus_maculatus