EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3A-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 5084 bases
Position: chrPEQF01098809.1:837651-842734
Accession: 111655658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015225	KH_1	PF00013.29	2.4e-25	1	2
ENSSLDP00000015225	KH_1	PF00013.29	2.4e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000015799	-	1887	XM_023407134	ENSSLDP00000015225	628 (aa)	XP_023262902	UPI000C6F7717

Gene Model

Click here to download ENSSLDG00000012129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012129	-	56	74.138	ENSSLDG00000010251	MEX3D	86	52.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012129	-	84	99.241	ENSAPOG00000008262	-	100	99.241	Acanthochromis_polyacanthus
ENSSLDG00000012129	-	84	98.476	ENSACIG00000017394	-	97	98.476	Amphilophus_citrinellus
ENSSLDG00000012129	-	84	99.241	ENSAOCG00000015646	-	100	99.241	Amphiprion_ocellaris
ENSSLDG00000012129	-	84	99.241	ENSAPEG00000022160	-	100	99.241	Amphiprion_percula
ENSSLDG00000012129	-	84	99.241	ENSATEG00000006186	-	100	99.241	Anabas_testudineus
ENSSLDG00000012129	-	100	94.754	ENSACLG00000010278	-	100	94.595	Astatotilapia_calliptera
ENSSLDG00000012129	-	84	81.250	ENSAMXG00000024633	-	100	81.474	Astyanax_mexicanus
ENSSLDG00000012129	-	84	90.095	ENSCSEG00000012003	-	100	89.905	Cynoglossus_semilaevis
ENSSLDG00000012129	-	84	90.909	ENSCVAG00000020021	-	100	89.773	Cyprinodon_variegatus
ENSSLDG00000012129	-	84	83.835	ENSDARG00000076638	FO082781.1	100	82.895	Danio_rerio
ENSSLDG00000012129	-	84	91.825	ENSELUG00000012012	-	100	90.684	Esox_lucius
ENSSLDG00000012129	-	84	94.307	ENSFHEG00000003026	-	100	93.359	Fundulus_heteroclitus
ENSSLDG00000012129	-	56	87.097	ENSGMOG00000006456	-	70	80.556	Gadus_morhua
ENSSLDG00000012129	-	84	94.886	ENSGAFG00000021726	-	100	94.129	Gambusia_affinis
ENSSLDG00000012129	-	84	83.002	ENSGACG00000013282	-	100	81.475	Gasterosteus_aculeatus
ENSSLDG00000012129	-	100	94.754	ENSHBUG00000009342	-	100	94.595	Haplochromis_burtoni
ENSSLDG00000012129	-	82	77.675	ENSHCOG00000007164	-	100	77.491	Hippocampus_comes
ENSSLDG00000012129	-	85	77.132	ENSIPUG00000006083	mex3a	98	77.677	Ictalurus_punctatus
ENSSLDG00000012129	-	86	90.942	ENSKMAG00000015538	-	96	91.123	Kryptolebias_marmoratus
ENSSLDG00000012129	-	84	97.714	ENSLBEG00000016402	-	100	97.714	Labrus_bergylta
ENSSLDG00000012129	-	84	77.861	ENSLOCG00000008857	-	100	77.674	Lepisosteus_oculatus
ENSSLDG00000012129	-	84	99.048	ENSMAMG00000010269	-	100	99.048	Mastacembelus_armatus
ENSSLDG00000012129	-	84	97.905	ENSMZEG00005017507	-	100	97.905	Maylandia_zebra
ENSSLDG00000012129	-	81	95.108	ENSMMOG00000017114	-	90	95.108	Mola_mola
ENSSLDG00000012129	-	88	98.367	ENSMALG00000004078	-	98	98.367	Monopterus_albus
ENSSLDG00000012129	-	84	98.286	ENSNBRG00000005141	-	100	98.286	Neolamprologus_brichardi
ENSSLDG00000012129	-	84	90.095	ENSONIG00000002279	-	100	89.205	Oreochromis_niloticus
ENSSLDG00000012129	-	85	91.061	ENSORLG00000024166	-	99	88.174	Oryzias_latipes
ENSSLDG00000012129	-	85	91.434	ENSORLG00020013757	-	99	88.522	Oryzias_latipes_hni
ENSSLDG00000012129	-	85	91.061	ENSORLG00015019602	-	99	88.174	Oryzias_latipes_hsok
ENSSLDG00000012129	-	84	91.667	ENSOMEG00000020254	-	100	91.667	Oryzias_melastigma
ENSSLDG00000012129	-	84	81.096	ENSPKIG00000020911	-	100	82.042	Paramormyrops_kingsleyae
ENSSLDG00000012129	-	84	82.765	ENSPKIG00000009869	-	97	82.514	Paramormyrops_kingsleyae
ENSSLDG00000012129	-	84	78.293	ENSPMGG00000004206	-	100	78.293	Periophthalmus_magnuspinnatus
ENSSLDG00000012129	-	84	94.528	ENSPFOG00000011366	-	100	93.774	Poecilia_formosa
ENSSLDG00000012129	-	84	94.707	ENSPLAG00000007972	-	100	93.951	Poecilia_latipinna
ENSSLDG00000012129	-	84	94.518	ENSPMEG00000001392	-	100	93.762	Poecilia_mexicana
ENSSLDG00000012129	-	84	94.528	ENSPREG00000017309	-	100	93.962	Poecilia_reticulata
ENSSLDG00000012129	-	84	98.286	ENSPNYG00000018270	-	100	98.286	Pundamilia_nyererei
ENSSLDG00000012129	-	84	80.292	ENSPNAG00000004505	-	100	80.657	Pygocentrus_nattereri
ENSSLDG00000012129	-	60	94.737	ENSSFOG00015008589	-	93	63.781	Scleropages_formosus
ENSSLDG00000012129	-	84	79.924	ENSSFOG00015024157	-	100	80.303	Scleropages_formosus
ENSSLDG00000012129	-	84	96.198	ENSSMAG00000016216	-	100	96.198	Scophthalmus_maximus
ENSSLDG00000012129	-	100	99.841	ENSSDUG00000006298	-	100	99.841	Seriola_dumerili
ENSSLDG00000012129	-	84	98.667	ENSSPAG00000012030	-	100	98.667	Stegastes_partitus
ENSSLDG00000012129	-	84	94.286	ENSTRUG00000007796	-	100	94.286	Takifugu_rubripes
ENSSLDG00000012129	-	61	93.247	ENSTNIG00000004473	-	97	93.247	Tetraodon_nigroviridis
ENSSLDG00000012129	-	61	87.411	ENSXCOG00000004225	-	89	87.411	Xiphophorus_couchianus
ENSSLDG00000012129	-	84	94.886	ENSXMAG00000013412	-	100	94.129	Xiphophorus_maculatus