EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012305 (Gene tree)
Gene ID: -
Gene Symbol: srsf9
Alias: zgc:77449
Full Name: serine and arginine rich splicing factor 9
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4979 bases
Position: chrPEQF01099085.1:3734012-3738990
Accession: 111664862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015486	RRM_1	PF00076.22	2.7e-30	1	2
ENSSLDP00000015486	RRM_1	PF00076.22	2.7e-30	2	2
ENSSLDP00000015501	RRM_1	PF00076.22	2.9e-30	1	2
ENSSLDP00000015501	RRM_1	PF00076.22	2.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016079	-	768	-	ENSSLDP00000015501	255 (aa)	-	-
ENSSLDT00000016063	-	1806	XM_023419652	ENSSLDP00000015486	249 (aa)	XP_023275420	UPI000BBF223C

Gene Model

Click here to download ENSSLDG00000012305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012305	srsf9	74	38.342	ENSSLDG00000004146	srsf5a	72	39.535
ENSSLDG00000012305	srsf9	68	42.541	ENSSLDG00000023255	srsf5b	60	41.111
ENSSLDG00000012305	srsf9	73	40.933	ENSSLDG00000022841	srsf6a	52	41.753
ENSSLDG00000012305	srsf9	73	58.791	ENSSLDG00000016868	-	72	62.032
ENSSLDG00000012305	srsf9	73	70.166	ENSSLDG00000010543	-	74	69.355
ENSSLDG00000012305	srsf9	85	56.075	ENSSLDG00000016895	-	92	56.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012305	srsf9	89	65.158	ENSG00000111786	SRSF9	99	62.069	Homo_sapiens
ENSSLDG00000012305	srsf9	100	95.181	ENSAPOG00000013728	srsf9	100	95.181	Acanthochromis_polyacanthus
ENSSLDG00000012305	srsf9	89	65.766	ENSAMEG00000013294	SRSF9	96	63.801	Ailuropoda_melanoleuca
ENSSLDG00000012305	srsf9	92	90.000	ENSACIG00000015765	srsf9	91	85.957	Amphilophus_citrinellus
ENSSLDG00000012305	srsf9	100	94.378	ENSAOCG00000002992	srsf9	100	94.378	Amphiprion_ocellaris
ENSSLDG00000012305	srsf9	100	94.378	ENSAPEG00000011908	srsf9	100	94.378	Amphiprion_percula
ENSSLDG00000012305	srsf9	100	96.386	ENSATEG00000019984	srsf9	100	96.386	Anabas_testudineus
ENSSLDG00000012305	srsf9	88	66.210	ENSACAG00000002877	SRSF9	86	63.063	Anolis_carolinensis
ENSSLDG00000012305	srsf9	89	64.706	ENSANAG00000035910	SRSF9	94	63.801	Aotus_nancymaae
ENSSLDG00000012305	srsf9	92	86.957	ENSACLG00000015678	srsf9	87	87.168	Astatotilapia_calliptera
ENSSLDG00000012305	srsf9	100	89.558	ENSAMXG00000032281	srsf9	90	88.393	Astyanax_mexicanus
ENSSLDG00000012305	srsf9	89	64.706	ENSBTAG00000012792	SRSF9	99	61.638	Bos_taurus
ENSSLDG00000012305	srsf9	85	66.038	ENSBTAG00000005584	-	95	62.780	Bos_taurus
ENSSLDG00000012305	srsf9	89	65.158	ENSCJAG00000001187	SRSF9	99	62.069	Callithrix_jacchus
ENSSLDG00000012305	srsf9	89	65.766	ENSCAFG00000010314	SRSF9	99	62.069	Canis_familiaris
ENSSLDG00000012305	srsf9	89	65.766	ENSCAFG00020020612	SRSF9	99	62.069	Canis_lupus_dingo
ENSSLDG00000012305	srsf9	89	64.706	ENSCHIG00000025274	SRSF9	99	61.638	Capra_hircus
ENSSLDG00000012305	srsf9	90	58.442	ENSTSYG00000034124	-	98	53.419	Carlito_syrichta
ENSSLDG00000012305	srsf9	89	59.910	ENSTSYG00000036169	-	98	54.077	Carlito_syrichta
ENSSLDG00000012305	srsf9	89	65.766	ENSTSYG00000006848	-	99	61.803	Carlito_syrichta
ENSSLDG00000012305	srsf9	89	54.054	ENSTSYG00000029305	-	98	48.498	Carlito_syrichta
ENSSLDG00000012305	srsf9	89	65.158	ENSCPOG00000033486	SRSF9	99	62.069	Cavia_porcellus
ENSSLDG00000012305	srsf9	89	65.158	ENSCCAG00000036053	SRSF9	99	62.069	Cebus_capucinus
ENSSLDG00000012305	srsf9	75	58.602	ENSCATG00000000421	-	88	56.452	Cercocebus_atys
ENSSLDG00000012305	srsf9	89	65.158	ENSCATG00000021315	SRSF9	99	62.069	Cercocebus_atys
ENSSLDG00000012305	srsf9	89	65.158	ENSCLAG00000012289	SRSF9	99	62.069	Chinchilla_lanigera
ENSSLDG00000012305	srsf9	89	65.158	ENSCSAG00000002257	SRSF9	99	62.069	Chlorocebus_sabaeus
ENSSLDG00000012305	srsf9	68	61.988	ENSCHOG00000009241	SRSF9	94	59.006	Choloepus_hoffmanni
ENSSLDG00000012305	srsf9	88	66.210	ENSCPBG00000011340	SRSF9	93	64.474	Chrysemys_picta_bellii
ENSSLDG00000012305	srsf9	86	63.380	ENSCANG00000034161	SRSF9	90	62.441	Colobus_angolensis_palliatus
ENSSLDG00000012305	srsf9	89	65.766	ENSCGRG00001021965	Srsf9	99	61.638	Cricetulus_griseus_chok1gshd
ENSSLDG00000012305	srsf9	100	89.286	ENSCSEG00000015663	srsf9	92	90.830	Cynoglossus_semilaevis
ENSSLDG00000012305	srsf9	100	84.337	ENSCVAG00000021417	srsf9	91	83.186	Cyprinodon_variegatus
ENSSLDG00000012305	srsf9	100	87.952	ENSDARG00000008097	srsf9	90	88.393	Danio_rerio
ENSSLDG00000012305	srsf9	89	65.158	ENSDNOG00000012598	SRSF9	99	62.069	Dasypus_novemcinctus
ENSSLDG00000012305	srsf9	89	65.766	ENSDORG00000013162	Srsf9	99	61.638	Dipodomys_ordii
ENSSLDG00000012305	srsf9	89	52.252	ENSETEG00000002606	SRSF9	75	67.347	Echinops_telfairi
ENSSLDG00000012305	srsf9	89	65.158	ENSEASG00005004727	SRSF9	99	62.069	Equus_asinus_asinus
ENSSLDG00000012305	srsf9	89	65.158	ENSECAG00000009116	SRSF9	99	62.069	Equus_caballus
ENSSLDG00000012305	srsf9	63	80.000	ENSEEUG00000011655	SRSF9	70	80.000	Erinaceus_europaeus
ENSSLDG00000012305	srsf9	100	78.740	ENSELUG00000012644	SRSF9	88	79.736	Esox_lucius
ENSSLDG00000012305	srsf9	94	84.681	ENSELUG00000021669	srsf9	91	83.700	Esox_lucius
ENSSLDG00000012305	srsf9	89	65.766	ENSFCAG00000011011	SRSF9	99	62.069	Felis_catus
ENSSLDG00000012305	srsf9	100	85.600	ENSFHEG00000020851	srsf9	92	84.141	Fundulus_heteroclitus
ENSSLDG00000012305	srsf9	100	85.039	ENSGMOG00000007980	srsf9	92	85.281	Gadus_morhua
ENSSLDG00000012305	srsf9	89	88.688	ENSGAFG00000009123	srsf9	100	87.330	Gambusia_affinis
ENSSLDG00000012305	srsf9	95	93.004	ENSGACG00000016921	srsf9	95	90.947	Gasterosteus_aculeatus
ENSSLDG00000012305	srsf9	88	65.753	ENSGAGG00000016015	SRSF9	93	64.035	Gopherus_agassizii
ENSSLDG00000012305	srsf9	50	49.606	ENSGGOG00000022012	-	92	50.407	Gorilla_gorilla
ENSSLDG00000012305	srsf9	69	60.234	ENSGGOG00000027142	-	95	50.467	Gorilla_gorilla
ENSSLDG00000012305	srsf9	92	86.957	ENSHBUG00000019320	srsf9	90	87.168	Haplochromis_burtoni
ENSSLDG00000012305	srsf9	89	65.158	ENSHGLG00000014372	SRSF9	99	62.069	Heterocephalus_glaber_female
ENSSLDG00000012305	srsf9	80	61.111	ENSHGLG00000003582	-	91	56.716	Heterocephalus_glaber_female
ENSSLDG00000012305	srsf9	79	61.735	ENSHGLG00100015198	-	89	59.296	Heterocephalus_glaber_male
ENSSLDG00000012305	srsf9	89	65.158	ENSHGLG00100013695	SRSF9	99	62.069	Heterocephalus_glaber_male
ENSSLDG00000012305	srsf9	100	71.146	ENSHCOG00000017311	srsf9	92	69.737	Hippocampus_comes
ENSSLDG00000012305	srsf9	100	86.747	ENSIPUG00000005511	srsf9	90	87.054	Ictalurus_punctatus
ENSSLDG00000012305	srsf9	89	65.158	ENSSTOG00000007344	SRSF9	99	62.069	Ictidomys_tridecemlineatus
ENSSLDG00000012305	srsf9	89	64.865	ENSJJAG00000013374	Srsf9	85	66.497	Jaculus_jaculus
ENSSLDG00000012305	srsf9	91	86.784	ENSKMAG00000007113	srsf9	91	86.344	Kryptolebias_marmoratus
ENSSLDG00000012305	srsf9	100	89.600	ENSLBEG00000017430	srsf9	92	86.475	Labrus_bergylta
ENSSLDG00000012305	srsf9	89	69.369	ENSLACG00000018228	SRSF9	94	73.874	Latimeria_chalumnae
ENSSLDG00000012305	srsf9	100	80.080	ENSLOCG00000004044	srsf9	87	86.607	Lepisosteus_oculatus
ENSSLDG00000012305	srsf9	74	60.326	ENSLAFG00000006381	SRSF9	97	59.239	Loxodonta_africana
ENSSLDG00000012305	srsf9	80	62.814	ENSMFAG00000039423	SRSF9	99	61.809	Macaca_fascicularis
ENSSLDG00000012305	srsf9	88	62.100	ENSMMUG00000016494	SRSF9	74	59.821	Macaca_mulatta
ENSSLDG00000012305	srsf9	75	60.215	ENSMMUG00000040941	-	86	59.140	Macaca_mulatta
ENSSLDG00000012305	srsf9	89	65.158	ENSMNEG00000044129	SRSF9	99	62.069	Macaca_nemestrina
ENSSLDG00000012305	srsf9	88	64.545	ENSMLEG00000041155	SRSF9	99	63.636	Mandrillus_leucophaeus
ENSSLDG00000012305	srsf9	100	95.181	ENSMAMG00000011581	srsf9	100	95.181	Mastacembelus_armatus
ENSSLDG00000012305	srsf9	92	86.957	ENSMZEG00005018422	srsf9	87	87.168	Maylandia_zebra
ENSSLDG00000012305	srsf9	89	65.315	ENSMAUG00000011403	Srsf9	99	61.207	Mesocricetus_auratus
ENSSLDG00000012305	srsf9	89	64.706	ENSMICG00000008674	SRSF9	99	61.638	Microcebus_murinus
ENSSLDG00000012305	srsf9	84	66.667	ENSMOCG00000021163	Srsf9	95	62.332	Microtus_ochrogaster
ENSSLDG00000012305	srsf9	94	91.880	ENSMMOG00000009349	srsf9	91	90.795	Mola_mola
ENSSLDG00000012305	srsf9	88	61.818	ENSMODG00000003146	SRSF9	96	65.022	Monodelphis_domestica
ENSSLDG00000012305	srsf9	100	94.163	ENSMALG00000011678	srsf9	100	94.163	Monopterus_albus
ENSSLDG00000012305	srsf9	89	66.216	MGP_CAROLIEiJ_G0027622	Srsf9	98	61.638	Mus_caroli
ENSSLDG00000012305	srsf9	89	66.216	ENSMUSG00000029538	Srsf9	98	61.638	Mus_musculus
ENSSLDG00000012305	srsf9	89	66.216	MGP_SPRETEiJ_G0028620	Srsf9	98	61.638	Mus_spretus
ENSSLDG00000012305	srsf9	89	65.179	ENSMPUG00000003193	SRSF9	98	62.821	Mustela_putorius_furo
ENSSLDG00000012305	srsf9	89	64.126	ENSMLUG00000010346	SRSF9	98	62.393	Myotis_lucifugus
ENSSLDG00000012305	srsf9	89	64.865	ENSNGAG00000012738	Srsf9	85	66.497	Nannospalax_galili
ENSSLDG00000012305	srsf9	92	86.957	ENSNBRG00000003888	srsf9	90	87.168	Neolamprologus_brichardi
ENSSLDG00000012305	srsf9	89	65.158	ENSNLEG00000015661	SRSF9	99	62.069	Nomascus_leucogenys
ENSSLDG00000012305	srsf9	83	61.321	ENSNLEG00000033316	-	96	54.198	Nomascus_leucogenys
ENSSLDG00000012305	srsf9	62	71.613	ENSMEUG00000004069	SRSF9	99	68.263	Notamacropus_eugenii
ENSSLDG00000012305	srsf9	89	65.315	ENSOPRG00000004234	SRSF9	99	61.638	Ochotona_princeps
ENSSLDG00000012305	srsf9	95	87.288	ENSONIG00000013974	srsf9	91	87.168	Oreochromis_niloticus
ENSSLDG00000012305	srsf9	89	64.706	ENSOCUG00000024603	SRSF9	99	61.638	Oryctolagus_cuniculus
ENSSLDG00000012305	srsf9	100	83.936	ENSORLG00000023709	srsf9	91	85.714	Oryzias_latipes
ENSSLDG00000012305	srsf9	100	83.936	ENSORLG00020017678	srsf9	91	85.714	Oryzias_latipes_hni
ENSSLDG00000012305	srsf9	100	83.936	ENSORLG00015004857	srsf9	91	85.714	Oryzias_latipes_hsok
ENSSLDG00000012305	srsf9	100	84.739	ENSOMEG00000002601	srsf9	91	86.283	Oryzias_melastigma
ENSSLDG00000012305	srsf9	89	65.158	ENSOGAG00000003852	SRSF9	98	62.069	Otolemur_garnettii
ENSSLDG00000012305	srsf9	97	58.607	ENSOARG00000012402	SRSF9	99	60.606	Ovis_aries
ENSSLDG00000012305	srsf9	86	63.551	ENSPPAG00000034420	SRSF9	82	63.415	Pan_paniscus
ENSSLDG00000012305	srsf9	50	55.469	ENSPPAG00000026547	-	93	53.968	Pan_paniscus
ENSSLDG00000012305	srsf9	89	65.766	ENSPPRG00000001309	SRSF9	99	62.069	Panthera_pardus
ENSSLDG00000012305	srsf9	68	60.819	ENSPTIG00000010327	SRSF9	67	59.006	Panthera_tigris_altaica
ENSSLDG00000012305	srsf9	89	65.158	ENSPTRG00000005535	SRSF9	99	62.069	Pan_troglodytes
ENSSLDG00000012305	srsf9	50	55.469	ENSPTRG00000052688	-	93	53.968	Pan_troglodytes
ENSSLDG00000012305	srsf9	89	65.158	ENSPANG00000016072	SRSF9	99	62.069	Papio_anubis
ENSSLDG00000012305	srsf9	86	88.785	ENSPKIG00000024851	SRSF9	89	83.621	Paramormyrops_kingsleyae
ENSSLDG00000012305	srsf9	100	81.275	ENSPKIG00000023787	srsf9	91	85.088	Paramormyrops_kingsleyae
ENSSLDG00000012305	srsf9	100	74.603	ENSPMGG00000016215	srsf9	91	75.109	Periophthalmus_magnuspinnatus
ENSSLDG00000012305	srsf9	85	66.667	ENSPEMG00000016311	Srsf9	95	61.883	Peromyscus_maniculatus_bairdii
ENSSLDG00000012305	srsf9	88	65.909	ENSPCIG00000025998	SRSF9	90	63.793	Phascolarctos_cinereus
ENSSLDG00000012305	srsf9	85	89.302	ENSPFOG00000019792	srsf9	91	88.210	Poecilia_formosa
ENSSLDG00000012305	srsf9	85	88.372	ENSPLAG00000022740	srsf9	91	87.336	Poecilia_latipinna
ENSSLDG00000012305	srsf9	85	88.837	ENSPMEG00000008809	srsf9	91	87.773	Poecilia_mexicana
ENSSLDG00000012305	srsf9	85	85.321	ENSPREG00000013165	srsf9	88	83.190	Poecilia_reticulata
ENSSLDG00000012305	srsf9	89	65.158	ENSPPYG00000005031	-	99	62.069	Pongo_abelii
ENSSLDG00000012305	srsf9	89	62.443	ENSPPYG00000029896	-	99	59.483	Pongo_abelii
ENSSLDG00000012305	srsf9	85	65.094	ENSPPYG00000019910	-	95	61.883	Pongo_abelii
ENSSLDG00000012305	srsf9	68	59.412	ENSPCAG00000013889	SRSF9	79	65.926	Procavia_capensis
ENSSLDG00000012305	srsf9	89	64.706	ENSPCOG00000015115	SRSF9	99	61.638	Propithecus_coquereli
ENSSLDG00000012305	srsf9	89	65.158	ENSPVAG00000002229	SRSF9	99	62.069	Pteropus_vampyrus
ENSSLDG00000012305	srsf9	92	86.957	ENSPNYG00000008644	srsf9	90	87.168	Pundamilia_nyererei
ENSSLDG00000012305	srsf9	100	85.141	ENSPNAG00000003588	srsf9	90	86.607	Pygocentrus_nattereri
ENSSLDG00000012305	srsf9	89	66.667	ENSRNOG00000001163	Srsf9	99	61.638	Rattus_norvegicus
ENSSLDG00000012305	srsf9	65	60.248	ENSRBIG00000042683	SRSF9	81	59.006	Rhinopithecus_bieti
ENSSLDG00000012305	srsf9	82	53.589	ENSRROG00000041980	SRSF9	96	54.404	Rhinopithecus_roxellana
ENSSLDG00000012305	srsf9	68	60.234	ENSSHAG00000005685	SRSF9	94	56.707	Sarcophilus_harrisii
ENSSLDG00000012305	srsf9	100	83.665	ENSSFOG00015017303	srsf9	91	86.842	Scleropages_formosus
ENSSLDG00000012305	srsf9	100	86.905	ENSSFOG00015002476	SRSF9	91	83.772	Scleropages_formosus
ENSSLDG00000012305	srsf9	88	88.235	ENSSMAG00000002039	srsf9	86	84.615	Scophthalmus_maximus
ENSSLDG00000012305	srsf9	100	100.000	ENSSDUG00000018908	srsf9	100	100.000	Seriola_dumerili
ENSSLDG00000012305	srsf9	68	60.819	ENSSARG00000003434	SRSF9	99	58.235	Sorex_araneus
ENSSLDG00000012305	srsf9	88	67.890	ENSSPUG00000015680	SRSF9	91	64.444	Sphenodon_punctatus
ENSSLDG00000012305	srsf9	100	97.590	ENSSPAG00000006285	srsf9	100	97.590	Stegastes_partitus
ENSSLDG00000012305	srsf9	89	65.158	ENSSSCG00000009906	SRSF9	99	62.069	Sus_scrofa
ENSSLDG00000012305	srsf9	69	57.310	ENSSSCG00000038585	-	89	49.708	Sus_scrofa
ENSSLDG00000012305	srsf9	100	71.984	ENSTRUG00000012723	srsf9	91	69.658	Takifugu_rubripes
ENSSLDG00000012305	srsf9	94	86.611	ENSTNIG00000000697	srsf9	92	84.783	Tetraodon_nigroviridis
ENSSLDG00000012305	srsf9	84	62.857	ENSTBEG00000008499	SRSF9	84	69.143	Tupaia_belangeri
ENSSLDG00000012305	srsf9	84	62.679	ENSTTRG00000000145	SRSF9	99	61.722	Tursiops_truncatus
ENSSLDG00000012305	srsf9	89	65.158	ENSUAMG00000015527	SRSF9	99	62.069	Ursus_americanus
ENSSLDG00000012305	srsf9	69	56.111	ENSUMAG00000006151	SRSF9	81	51.795	Ursus_maritimus
ENSSLDG00000012305	srsf9	89	65.766	ENSVVUG00000021065	SRSF9	99	62.069	Vulpes_vulpes
ENSSLDG00000012305	srsf9	89	59.193	ENSXETG00000026940	srsf9	98	58.898	Xenopus_tropicalis
ENSSLDG00000012305	srsf9	87	89.352	ENSXMAG00000001438	srsf9	100	87.963	Xiphophorus_maculatus