EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012330 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 16267 bases
Position: chrPEQF01099363.1:762536-778802
Accession: 111671578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015571	ResIII	PF04851.15	7.2e-08	1	1
ENSSLDP00000015546	ResIII	PF04851.15	7.8e-08	1	1
ENSSLDP00000015571	DEAD	PF00270.29	1.7e-06	1	1
ENSSLDP00000015546	DEAD	PF00270.29	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016126	-	3024	XM_023428698	ENSSLDP00000015546	740 (aa)	XP_023284466	UPI000C6FC083
ENSSLDT00000016150	-	2913	XM_023428699	ENSSLDP00000015571	703 (aa)	XP_023284467	UPI000C6F6E4C

Gene Model

Click here to download ENSSLDG00000012330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012330	rad54l	82	46.102	ENSSLDG00000013787	rad54b	66	44.482
ENSSLDG00000012330	rad54l	77	30.833	ENSSLDG00000018663	ercc6l2	53	30.833
ENSSLDG00000012330	rad54l	71	32.136	ENSSLDG00000012714	chd1l	50	32.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012330	rad54l	99	79.893	ENSG00000085999	RAD54L	100	86.667	Homo_sapiens
ENSSLDG00000012330	rad54l	99	90.244	ENSAPOG00000011643	rad54l	99	90.244	Acanthochromis_polyacanthus
ENSSLDG00000012330	rad54l	99	79.195	ENSAMEG00000013902	RAD54L	99	79.195	Ailuropoda_melanoleuca
ENSSLDG00000012330	rad54l	99	88.769	ENSACIG00000001939	rad54l	99	88.769	Amphilophus_citrinellus
ENSSLDG00000012330	rad54l	99	93.369	ENSAOCG00000017576	rad54l	100	93.369	Amphiprion_ocellaris
ENSSLDG00000012330	rad54l	96	94.074	ENSAPEG00000020658	rad54l	99	93.277	Amphiprion_percula
ENSSLDG00000012330	rad54l	96	94.083	ENSATEG00000006767	rad54l	100	93.447	Anabas_testudineus
ENSSLDG00000012330	rad54l	98	82.799	ENSAPLG00000006389	RAD54L	99	83.119	Anas_platyrhynchos
ENSSLDG00000012330	rad54l	99	81.561	ENSACAG00000002312	RAD54L	99	81.561	Anolis_carolinensis
ENSSLDG00000012330	rad54l	99	79.893	ENSANAG00000035439	RAD54L	99	79.893	Aotus_nancymaae
ENSSLDG00000012330	rad54l	100	88.784	ENSACLG00000018711	rad54l	100	88.784	Astatotilapia_calliptera
ENSSLDG00000012330	rad54l	100	86.792	ENSAMXG00000012777	rad54l	100	86.792	Astyanax_mexicanus
ENSSLDG00000012330	rad54l	99	80.187	ENSBTAG00000019901	RAD54L	99	80.187	Bos_taurus
ENSSLDG00000012330	rad54l	95	59.463	WBGene00004298	rad-54	84	58.297	Caenorhabditis_elegans
ENSSLDG00000012330	rad54l	97	80.860	ENSCJAG00000021080	RAD54L	91	80.860	Callithrix_jacchus
ENSSLDG00000012330	rad54l	99	79.223	ENSCAFG00000004272	RAD54L	99	79.223	Canis_familiaris
ENSSLDG00000012330	rad54l	99	79.195	ENSCAFG00020015066	RAD54L	99	79.195	Canis_lupus_dingo
ENSSLDG00000012330	rad54l	99	80.027	ENSCHIG00000020118	RAD54L	99	80.027	Capra_hircus
ENSSLDG00000012330	rad54l	99	79.920	ENSTSYG00000002032	RAD54L	99	79.920	Carlito_syrichta
ENSSLDG00000012330	rad54l	99	80.697	ENSCPOG00000006768	RAD54L	99	80.697	Cavia_porcellus
ENSSLDG00000012330	rad54l	99	80.295	ENSCCAG00000025783	RAD54L	99	80.295	Cebus_capucinus
ENSSLDG00000012330	rad54l	99	79.759	ENSCATG00000030589	RAD54L	99	79.759	Cercocebus_atys
ENSSLDG00000012330	rad54l	99	80.563	ENSCLAG00000004645	RAD54L	99	80.563	Chinchilla_lanigera
ENSSLDG00000012330	rad54l	99	79.625	ENSCSAG00000001229	RAD54L	99	79.625	Chlorocebus_sabaeus
ENSSLDG00000012330	rad54l	99	81.696	ENSCPBG00000005675	RAD54L	99	81.696	Chrysemys_picta_bellii
ENSSLDG00000012330	rad54l	96	67.493	ENSCING00000024456	-	100	62.887	Ciona_intestinalis
ENSSLDG00000012330	rad54l	96	67.994	ENSCSAVG00000010859	-	100	63.969	Ciona_savignyi
ENSSLDG00000012330	rad54l	99	79.625	ENSCANG00000034891	RAD54L	99	79.625	Colobus_angolensis_palliatus
ENSSLDG00000012330	rad54l	99	79.973	ENSCGRG00001014807	Rad54l	99	79.973	Cricetulus_griseus_chok1gshd
ENSSLDG00000012330	rad54l	99	79.973	ENSCGRG00000016038	Rad54l	99	79.973	Cricetulus_griseus_crigri
ENSSLDG00000012330	rad54l	99	90.403	ENSCSEG00000001983	rad54l	99	90.403	Cynoglossus_semilaevis
ENSSLDG00000012330	rad54l	92	87.649	ENSCVAG00000019561	rad54l	100	87.649	Cyprinodon_variegatus
ENSSLDG00000012330	rad54l	100	86.622	ENSDARG00000018623	rad54l	100	86.622	Danio_rerio
ENSSLDG00000012330	rad54l	99	79.357	ENSDNOG00000003395	RAD54L	99	79.357	Dasypus_novemcinctus
ENSSLDG00000012330	rad54l	99	72.800	ENSDORG00000002632	Rad54l	99	72.800	Dipodomys_ordii
ENSSLDG00000012330	rad54l	99	53.907	FBgn0002989	okr	95	53.907	Drosophila_melanogaster
ENSSLDG00000012330	rad54l	78	78.603	ENSETEG00000000550	RAD54L	78	78.603	Echinops_telfairi
ENSSLDG00000012330	rad54l	99	79.329	ENSEASG00005004511	RAD54L	99	79.463	Equus_asinus_asinus
ENSSLDG00000012330	rad54l	99	81.586	ENSECAG00000008760	RAD54L	99	81.586	Equus_caballus
ENSSLDG00000012330	rad54l	99	76.542	ENSEEUG00000008113	RAD54L	99	76.542	Erinaceus_europaeus
ENSSLDG00000012330	rad54l	100	88.725	ENSELUG00000002295	rad54l	100	88.725	Esox_lucius
ENSSLDG00000012330	rad54l	99	78.954	ENSFCAG00000003444	RAD54L	99	78.954	Felis_catus
ENSSLDG00000012330	rad54l	99	80.754	ENSFALG00000009480	RAD54L	99	80.754	Ficedula_albicollis
ENSSLDG00000012330	rad54l	99	79.893	ENSFDAG00000007806	RAD54L	99	79.893	Fukomys_damarensis
ENSSLDG00000012330	rad54l	61	86.946	ENSFHEG00000009824	rad54l	83	82.328	Fundulus_heteroclitus
ENSSLDG00000012330	rad54l	99	86.198	ENSGMOG00000014568	rad54l	100	86.198	Gadus_morhua
ENSSLDG00000012330	rad54l	99	81.132	ENSGALG00000010356	RAD54L	92	81.132	Gallus_gallus
ENSSLDG00000012330	rad54l	91	87.389	ENSGAFG00000011110	rad54l	100	87.389	Gambusia_affinis
ENSSLDG00000012330	rad54l	100	91.498	ENSGACG00000003111	rad54l	98	91.498	Gasterosteus_aculeatus
ENSSLDG00000012330	rad54l	99	81.132	ENSGAGG00000014089	RAD54L	96	81.132	Gopherus_agassizii
ENSSLDG00000012330	rad54l	99	79.759	ENSGGOG00000010602	RAD54L	99	79.759	Gorilla_gorilla
ENSSLDG00000012330	rad54l	100	88.919	ENSHBUG00000007793	rad54l	100	88.919	Haplochromis_burtoni
ENSSLDG00000012330	rad54l	99	80.161	ENSHGLG00000000753	RAD54L	99	80.161	Heterocephalus_glaber_female
ENSSLDG00000012330	rad54l	99	80.027	ENSHGLG00100016987	RAD54L	99	80.027	Heterocephalus_glaber_male
ENSSLDG00000012330	rad54l	100	85.195	ENSIPUG00000015999	rad54l	100	88.092	Ictalurus_punctatus
ENSSLDG00000012330	rad54l	99	79.088	ENSSTOG00000029125	RAD54L	99	79.088	Ictidomys_tridecemlineatus
ENSSLDG00000012330	rad54l	99	67.158	ENSJJAG00000000235	-	99	67.024	Jaculus_jaculus
ENSSLDG00000012330	rad54l	100	88.243	ENSKMAG00000009944	rad54l	100	88.243	Kryptolebias_marmoratus
ENSSLDG00000012330	rad54l	99	92.402	ENSLBEG00000014617	rad54l	99	92.402	Labrus_bergylta
ENSSLDG00000012330	rad54l	100	86.272	ENSLOCG00000004144	rad54l	100	87.816	Lepisosteus_oculatus
ENSSLDG00000012330	rad54l	99	79.463	ENSLAFG00000007583	RAD54L	99	79.866	Loxodonta_africana
ENSSLDG00000012330	rad54l	99	79.759	ENSMFAG00000031241	RAD54L	99	79.759	Macaca_fascicularis
ENSSLDG00000012330	rad54l	99	79.759	ENSMMUG00000011568	RAD54L	99	79.759	Macaca_mulatta
ENSSLDG00000012330	rad54l	99	79.625	ENSMNEG00000038562	RAD54L	99	79.625	Macaca_nemestrina
ENSSLDG00000012330	rad54l	99	79.759	ENSMLEG00000038145	RAD54L	99	79.759	Mandrillus_leucophaeus
ENSSLDG00000012330	rad54l	99	89.837	ENSMAMG00000022180	rad54l	99	91.728	Mastacembelus_armatus
ENSSLDG00000012330	rad54l	100	88.649	ENSMZEG00005018081	rad54l	100	88.649	Maylandia_zebra
ENSSLDG00000012330	rad54l	99	81.242	ENSMGAG00000010634	RAD54L	99	81.242	Meleagris_gallopavo
ENSSLDG00000012330	rad54l	99	80.242	ENSMAUG00000020076	Rad54l	99	80.242	Mesocricetus_auratus
ENSSLDG00000012330	rad54l	99	80.563	ENSMICG00000003266	RAD54L	99	80.563	Microcebus_murinus
ENSSLDG00000012330	rad54l	99	80.511	ENSMOCG00000001778	Rad54l	99	80.511	Microtus_ochrogaster
ENSSLDG00000012330	rad54l	99	87.736	ENSMALG00000021148	rad54l	99	87.736	Monopterus_albus
ENSSLDG00000012330	rad54l	99	75.619	MGP_CAROLIEiJ_G0026325	Rad54l	99	75.619	Mus_caroli
ENSSLDG00000012330	rad54l	99	79.893	ENSMUSG00000028702	Rad54l	99	79.893	Mus_musculus
ENSSLDG00000012330	rad54l	99	79.866	MGP_PahariEiJ_G0028657	Rad54l	99	79.866	Mus_pahari
ENSSLDG00000012330	rad54l	99	79.893	MGP_SPRETEiJ_G0027297	Rad54l	99	79.893	Mus_spretus
ENSSLDG00000012330	rad54l	99	79.223	ENSMPUG00000012883	RAD54L	99	79.223	Mustela_putorius_furo
ENSSLDG00000012330	rad54l	99	79.866	ENSMLUG00000003763	RAD54L	99	79.866	Myotis_lucifugus
ENSSLDG00000012330	rad54l	99	79.893	ENSNGAG00000024213	Rad54l	99	79.893	Nannospalax_galili
ENSSLDG00000012330	rad54l	99	80.161	ENSNLEG00000016548	RAD54L	99	80.161	Nomascus_leucogenys
ENSSLDG00000012330	rad54l	96	79.525	ENSMEUG00000006793	RAD54L	100	79.525	Notamacropus_eugenii
ENSSLDG00000012330	rad54l	90	81.882	ENSOPRG00000016016	RAD54L	90	81.882	Ochotona_princeps
ENSSLDG00000012330	rad54l	99	80.697	ENSODEG00000008519	RAD54L	99	80.697	Octodon_degus
ENSSLDG00000012330	rad54l	100	88.649	ENSONIG00000007659	rad54l	100	88.649	Oreochromis_niloticus
ENSSLDG00000012330	rad54l	99	80.295	ENSOCUG00000005229	RAD54L	99	80.295	Oryctolagus_cuniculus
ENSSLDG00000012330	rad54l	100	86.216	ENSORLG00000002958	rad54l	100	86.486	Oryzias_latipes
ENSSLDG00000012330	rad54l	99	86.874	ENSORLG00020006554	rad54l	99	89.706	Oryzias_latipes_hni
ENSSLDG00000012330	rad54l	100	86.216	ENSORLG00015002907	rad54l	100	86.757	Oryzias_latipes_hsok
ENSSLDG00000012330	rad54l	99	87.009	ENSOMEG00000007770	rad54l	99	87.009	Oryzias_melastigma
ENSSLDG00000012330	rad54l	99	80.080	ENSOARG00000002264	RAD54L	99	80.080	Ovis_aries
ENSSLDG00000012330	rad54l	99	79.759	ENSPPAG00000031222	RAD54L	99	79.759	Pan_paniscus
ENSSLDG00000012330	rad54l	99	78.820	ENSPPRG00000010317	RAD54L	99	78.820	Panthera_pardus
ENSSLDG00000012330	rad54l	99	78.820	ENSPTIG00000012200	RAD54L	99	78.820	Panthera_tigris_altaica
ENSSLDG00000012330	rad54l	99	79.759	ENSPTRG00000000689	RAD54L	99	79.759	Pan_troglodytes
ENSSLDG00000012330	rad54l	99	79.759	ENSPANG00000016295	RAD54L	99	79.759	Papio_anubis
ENSSLDG00000012330	rad54l	99	78.455	ENSPKIG00000016172	rad54l	99	78.455	Paramormyrops_kingsleyae
ENSSLDG00000012330	rad54l	99	81.471	ENSPSIG00000003258	RAD54L	99	81.471	Pelodiscus_sinensis
ENSSLDG00000012330	rad54l	99	80.514	ENSPMGG00000016335	rad54l	99	80.514	Periophthalmus_magnuspinnatus
ENSSLDG00000012330	rad54l	99	80.242	ENSPEMG00000011422	Rad54l	99	80.242	Peromyscus_maniculatus_bairdii
ENSSLDG00000012330	rad54l	99	70.755	ENSPMAG00000007719	rad54l	99	70.755	Petromyzon_marinus
ENSSLDG00000012330	rad54l	100	80.645	ENSPCIG00000029032	RAD54L	100	80.645	Phascolarctos_cinereus
ENSSLDG00000012330	rad54l	87	90.164	ENSPFOG00000013732	rad54l	100	89.151	Poecilia_formosa
ENSSLDG00000012330	rad54l	86	86.992	ENSPLAG00000023416	rad54l	99	86.992	Poecilia_latipinna
ENSSLDG00000012330	rad54l	91	87.389	ENSPMEG00000008299	rad54l	100	87.389	Poecilia_mexicana
ENSSLDG00000012330	rad54l	100	86.622	ENSPREG00000019955	rad54l	100	86.622	Poecilia_reticulata
ENSSLDG00000012330	rad54l	99	68.005	ENSPPYG00000001398	RAD54L	99	68.005	Pongo_abelii
ENSSLDG00000012330	rad54l	79	80.882	ENSPCAG00000005323	RAD54L	80	80.097	Procavia_capensis
ENSSLDG00000012330	rad54l	99	80.295	ENSPCOG00000015423	RAD54L	99	80.295	Propithecus_coquereli
ENSSLDG00000012330	rad54l	99	87.764	ENSPNYG00000002942	rad54l	99	87.764	Pundamilia_nyererei
ENSSLDG00000012330	rad54l	100	86.910	ENSPNAG00000012483	rad54l	100	86.910	Pygocentrus_nattereri
ENSSLDG00000012330	rad54l	99	79.759	ENSRNOG00000013148	Rad54l	99	79.759	Rattus_norvegicus
ENSSLDG00000012330	rad54l	99	79.893	ENSRBIG00000043495	RAD54L	99	79.893	Rhinopithecus_bieti
ENSSLDG00000012330	rad54l	99	79.759	ENSRROG00000020844	RAD54L	99	79.759	Rhinopithecus_roxellana
ENSSLDG00000012330	rad54l	85	49.845	YGL163C	RAD54	71	50.155	Saccharomyces_cerevisiae
ENSSLDG00000012330	rad54l	99	80.161	ENSSBOG00000024672	RAD54L	99	80.161	Saimiri_boliviensis_boliviensis
ENSSLDG00000012330	rad54l	100	80.161	ENSSHAG00000000110	RAD54L	100	80.161	Sarcophilus_harrisii
ENSSLDG00000012330	rad54l	100	98.514	ENSSDUG00000019147	rad54l	100	98.514	Seriola_dumerili
ENSSLDG00000012330	rad54l	84	79.454	ENSSARG00000006689	RAD54L	100	79.454	Sorex_araneus
ENSSLDG00000012330	rad54l	99	91.881	ENSSPAG00000011016	rad54l	100	91.881	Stegastes_partitus
ENSSLDG00000012330	rad54l	99	79.893	ENSSSCG00000003905	RAD54L	99	79.893	Sus_scrofa
ENSSLDG00000012330	rad54l	99	80.888	ENSTGUG00000008233	RAD54L	99	81.023	Taeniopygia_guttata
ENSSLDG00000012330	rad54l	99	89.124	ENSTRUG00000008410	rad54l	99	89.124	Takifugu_rubripes
ENSSLDG00000012330	rad54l	99	82.544	ENSTNIG00000004716	rad54l	99	82.544	Tetraodon_nigroviridis
ENSSLDG00000012330	rad54l	99	74.531	ENSTTRG00000006315	RAD54L	99	74.531	Tursiops_truncatus
ENSSLDG00000012330	rad54l	99	79.082	ENSUAMG00000011824	RAD54L	99	79.082	Ursus_americanus
ENSSLDG00000012330	rad54l	99	78.003	ENSUMAG00000023603	RAD54L	99	78.003	Ursus_maritimus
ENSSLDG00000012330	rad54l	99	79.223	ENSVVUG00000007201	RAD54L	99	79.223	Vulpes_vulpes
ENSSLDG00000012330	rad54l	100	75.637	ENSXETG00000004369	rad54l	99	76.718	Xenopus_tropicalis
ENSSLDG00000012330	rad54l	55	85.539	ENSXCOG00000016028	rad54l	83	87.831	Xiphophorus_couchianus