EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 1133 bases
Position: chrPEQF01099042.1:41114-42246
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015595	PARP	PF00644.20	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016176	-	516	-	ENSSLDP00000015595	171 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000012388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012388	-	87	48.000	ENSSLDG00000018358	gig2p	64	48.000
ENSSLDG00000012388	-	89	70.588	ENSSLDG00000013905	-	90	70.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012388	-	89	68.627	ENSAPOG00000010161	-	91	68.627	Acanthochromis_polyacanthus
ENSSLDG00000012388	-	94	65.839	ENSACIG00000018444	-	96	65.839	Amphilophus_citrinellus
ENSSLDG00000012388	-	84	65.035	ENSAOCG00000022001	-	94	65.035	Amphiprion_ocellaris
ENSSLDG00000012388	-	84	65.035	ENSAOCG00000010913	-	94	65.035	Amphiprion_ocellaris
ENSSLDG00000012388	-	96	64.634	ENSAOCG00000022027	-	99	64.634	Amphiprion_ocellaris
ENSSLDG00000012388	-	95	61.818	ENSAPEG00000005698	-	92	61.818	Amphiprion_percula
ENSSLDG00000012388	-	92	65.605	ENSAPEG00000005707	-	97	65.605	Amphiprion_percula
ENSSLDG00000012388	-	84	65.035	ENSAPEG00000005732	-	94	65.035	Amphiprion_percula
ENSSLDG00000012388	-	88	76.667	ENSATEG00000019359	-	89	76.667	Anabas_testudineus
ENSSLDG00000012388	-	77	71.212	ENSACLG00000019059	-	93	71.212	Astatotilapia_calliptera
ENSSLDG00000012388	-	77	68.939	ENSCVAG00000003727	-	80	68.939	Cyprinodon_variegatus
ENSSLDG00000012388	-	94	70.000	ENSCVAG00000014970	-	93	70.000	Cyprinodon_variegatus
ENSSLDG00000012388	-	85	68.276	ENSCVAG00000003747	-	96	68.276	Cyprinodon_variegatus
ENSSLDG00000012388	-	79	54.412	ENSELUG00000017332	-	89	54.412	Esox_lucius
ENSSLDG00000012388	-	75	66.406	ENSFHEG00000017166	-	74	66.406	Fundulus_heteroclitus
ENSSLDG00000012388	-	92	67.089	ENSFHEG00000017157	-	92	67.089	Fundulus_heteroclitus
ENSSLDG00000012388	-	91	64.516	ENSFHEG00000017170	-	92	63.750	Fundulus_heteroclitus
ENSSLDG00000012388	-	84	67.133	ENSGMOG00000020321	-	99	67.133	Gadus_morhua
ENSSLDG00000012388	-	88	63.399	ENSGMOG00000019928	-	99	63.399	Gadus_morhua
ENSSLDG00000012388	-	73	66.929	ENSGMOG00000020414	-	99	66.929	Gadus_morhua
ENSSLDG00000012388	-	84	63.194	ENSGMOG00000020063	-	100	63.194	Gadus_morhua
ENSSLDG00000012388	-	73	67.460	ENSGMOG00000020583	-	100	67.460	Gadus_morhua
ENSSLDG00000012388	-	88	66.225	ENSGMOG00000013817	-	99	66.225	Gadus_morhua
ENSSLDG00000012388	-	76	63.077	ENSGMOG00000020613	-	100	63.077	Gadus_morhua
ENSSLDG00000012388	-	88	62.914	ENSGMOG00000019914	-	99	62.914	Gadus_morhua
ENSSLDG00000012388	-	74	65.079	ENSGAFG00000004666	-	100	65.079	Gambusia_affinis
ENSSLDG00000012388	-	94	65.625	ENSGAFG00000005347	-	96	65.625	Gambusia_affinis
ENSSLDG00000012388	-	88	70.588	ENSGACG00000014936	-	99	70.588	Gasterosteus_aculeatus
ENSSLDG00000012388	-	94	65.000	ENSHBUG00000018905	-	96	65.000	Haplochromis_burtoni
ENSSLDG00000012388	-	95	62.963	ENSHCOG00000006694	-	99	62.963	Hippocampus_comes
ENSSLDG00000012388	-	94	64.596	ENSKMAG00000004246	-	96	64.596	Kryptolebias_marmoratus
ENSSLDG00000012388	-	95	66.467	ENSLBEG00000010115	-	99	66.467	Labrus_bergylta
ENSSLDG00000012388	-	82	56.552	ENSLBEG00000007190	-	88	60.606	Labrus_bergylta
ENSSLDG00000012388	-	72	75.610	ENSLBEG00000007243	-	92	75.610	Labrus_bergylta
ENSSLDG00000012388	-	87	75.000	ENSLBEG00000010100	-	94	75.000	Labrus_bergylta
ENSSLDG00000012388	-	78	69.173	ENSLBEG00000007220	-	74	69.173	Labrus_bergylta
ENSSLDG00000012388	-	74	61.719	ENSLBEG00000007229	-	50	61.719	Labrus_bergylta
ENSSLDG00000012388	-	94	72.050	ENSLBEG00000010046	-	99	72.050	Labrus_bergylta
ENSSLDG00000012388	-	95	68.712	ENSMAMG00000019358	-	97	68.712	Mastacembelus_armatus
ENSSLDG00000012388	-	92	67.516	ENSMZEG00005002337	-	96	67.516	Maylandia_zebra
ENSSLDG00000012388	-	93	67.500	ENSMZEG00005002350	-	95	67.500	Maylandia_zebra
ENSSLDG00000012388	-	89	68.627	ENSMMOG00000020156	-	95	69.079	Mola_mola
ENSSLDG00000012388	-	88	68.667	ENSMMOG00000020157	-	96	69.128	Mola_mola
ENSSLDG00000012388	-	93	67.925	ENSMMOG00000020154	-	96	67.925	Mola_mola
ENSSLDG00000012388	-	74	75.591	ENSMALG00000021097	-	100	75.591	Monopterus_albus
ENSSLDG00000012388	-	75	60.156	ENSMALG00000014591	-	74	60.156	Monopterus_albus
ENSSLDG00000012388	-	94	65.217	ENSNBRG00000009079	-	95	65.217	Neolamprologus_brichardi
ENSSLDG00000012388	-	91	63.871	ENSNBRG00000009099	-	90	63.871	Neolamprologus_brichardi
ENSSLDG00000012388	-	91	65.385	ENSONIG00000021378	-	99	65.385	Oreochromis_niloticus
ENSSLDG00000012388	-	94	65.625	ENSONIG00000009459	-	95	65.625	Oreochromis_niloticus
ENSSLDG00000012388	-	85	65.068	ENSORLG00000001055	-	87	65.068	Oryzias_latipes
ENSSLDG00000012388	-	89	64.706	ENSORLG00020017394	-	54	62.500	Oryzias_latipes_hni
ENSSLDG00000012388	-	89	64.052	ENSOMEG00000015284	-	92	64.052	Oryzias_melastigma
ENSSLDG00000012388	-	91	60.256	ENSOMEG00000015296	-	66	60.256	Oryzias_melastigma
ENSSLDG00000012388	-	91	67.097	ENSPMGG00000017877	-	90	67.097	Periophthalmus_magnuspinnatus
ENSSLDG00000012388	-	91	67.742	ENSPMGG00000017878	-	95	67.742	Periophthalmus_magnuspinnatus
ENSSLDG00000012388	-	88	65.563	ENSPFOG00000020434	-	100	65.563	Poecilia_formosa
ENSSLDG00000012388	-	97	62.048	ENSPLAG00000020837	-	96	62.048	Poecilia_latipinna
ENSSLDG00000012388	-	88	64.901	ENSPLAG00000014302	-	92	64.901	Poecilia_latipinna
ENSSLDG00000012388	-	91	64.516	ENSPMEG00000011183	-	76	64.516	Poecilia_mexicana
ENSSLDG00000012388	-	90	64.935	ENSPREG00000013691	-	95	64.706	Poecilia_reticulata
ENSSLDG00000012388	-	84	73.427	ENSSMAG00000014710	-	92	72.436	Scophthalmus_maximus
ENSSLDG00000012388	-	82	65.714	ENSSMAG00000014637	-	94	65.714	Scophthalmus_maximus
ENSSLDG00000012388	-	96	67.470	ENSSMAG00000014601	-	98	67.470	Scophthalmus_maximus
ENSSLDG00000012388	-	92	69.620	ENSSDUG00000012574	-	94	69.620	Seriola_dumerili
ENSSLDG00000012388	-	91	96.129	ENSSDUG00000006287	-	92	96.129	Seriola_dumerili
ENSSLDG00000012388	-	86	70.068	ENSSPAG00000005395	-	94	70.068	Stegastes_partitus
ENSSLDG00000012388	-	91	67.308	ENSSPAG00000005387	-	85	67.308	Stegastes_partitus
ENSSLDG00000012388	-	89	66.447	ENSTRUG00000023048	-	100	66.447	Takifugu_rubripes
ENSSLDG00000012388	-	85	69.655	ENSTRUG00000020594	-	87	69.655	Takifugu_rubripes
ENSSLDG00000012388	-	74	69.841	ENSTRUG00000025007	-	79	69.841	Takifugu_rubripes
ENSSLDG00000012388	-	86	66.667	ENSTRUG00000024239	-	99	66.667	Takifugu_rubripes
ENSSLDG00000012388	-	77	68.702	ENSXCOG00000018144	-	88	68.702	Xiphophorus_couchianus
ENSSLDG00000012388	-	94	64.417	ENSXCOG00000000142	-	98	64.417	Xiphophorus_couchianus
ENSSLDG00000012388	-	75	68.217	ENSXMAG00000023121	-	85	68.217	Xiphophorus_maculatus
ENSSLDG00000012388	-	92	66.242	ENSXMAG00000019489	-	96	66.242	Xiphophorus_maculatus