EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012415 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: si:dkey-89b17.4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6580 bases
Position: chrPEQF01099258.1:19383-25962
Accession: ZDB-GENE-030131-8215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	1	6
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	2	6
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	3	6
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	4	6
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	5	6
ENSSLDP00000015622	zf-C2H2	PF00096.26	1.4e-54	6	6
ENSSLDP00000015622	zf-met	PF12874.7	2.6e-09	1	2
ENSSLDP00000015622	zf-met	PF12874.7	2.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016203	-	4870	-	ENSSLDP00000015622	1254 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000012415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012415	si:dkey-89b17.4	54	44.828	ENSSLDG00000020990	-	57	44.828
ENSSLDG00000012415	si:dkey-89b17.4	95	41.026	ENSSLDG00000013760	-	98	41.026
ENSSLDG00000012415	si:dkey-89b17.4	62	36.667	ENSSLDG00000001860	-	72	36.667
ENSSLDG00000012415	si:dkey-89b17.4	82	32.394	ENSSLDG00000009821	-	79	32.394
ENSSLDG00000012415	si:dkey-89b17.4	98	41.898	ENSSLDG00000018521	znf646	98	41.866
ENSSLDG00000012415	si:dkey-89b17.4	59	32.422	ENSSLDG00000010390	-	82	42.623
ENSSLDG00000012415	si:dkey-89b17.4	65	45.333	ENSSLDG00000006994	-	67	45.333
ENSSLDG00000012415	si:dkey-89b17.4	83	31.148	ENSSLDG00000013170	zbtb17	78	31.148
ENSSLDG00000012415	si:dkey-89b17.4	95	30.660	ENSSLDG00000016317	-	86	30.120
ENSSLDG00000012415	si:dkey-89b17.4	60	42.857	ENSSLDG00000020727	-	97	42.857
ENSSLDG00000012415	si:dkey-89b17.4	95	38.462	ENSSLDG00000007756	-	89	38.462
ENSSLDG00000012415	si:dkey-89b17.4	54	33.591	ENSSLDG00000018493	-	79	32.432
ENSSLDG00000012415	si:dkey-89b17.4	95	32.143	ENSSLDG00000000376	-	73	32.143
ENSSLDG00000012415	si:dkey-89b17.4	83	39.759	ENSSLDG00000012133	-	96	41.667
ENSSLDG00000012415	si:dkey-89b17.4	79	40.789	ENSSLDG00000012821	znf236	75	40.789
ENSSLDG00000012415	si:dkey-89b17.4	63	40.260	ENSSLDG00000007524	-	68	40.260
ENSSLDG00000012415	si:dkey-89b17.4	62	31.250	ENSSLDG00000012320	-	96	30.078
ENSSLDG00000012415	si:dkey-89b17.4	64	33.645	ENSSLDG00000000203	-	80	33.645
ENSSLDG00000012415	si:dkey-89b17.4	95	36.559	ENSSLDG00000017937	-	91	36.559
ENSSLDG00000012415	si:dkey-89b17.4	55	30.460	ENSSLDG00000016512	gfi1aa	65	33.721
ENSSLDG00000012415	si:dkey-89b17.4	93	30.303	ENSSLDG00000005670	-	93	30.303
ENSSLDG00000012415	si:dkey-89b17.4	95	30.196	ENSSLDG00000020675	-	72	38.298
ENSSLDG00000012415	si:dkey-89b17.4	56	31.068	ENSSLDG00000001787	zbtb24	78	39.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012415	si:dkey-89b17.4	98	41.045	ENSAPOG00000020151	znf646	98	41.339	Acanthochromis_polyacanthus
ENSSLDG00000012415	si:dkey-89b17.4	100	97.373	ENSAPOG00000018015	si:dkey-89b17.4	100	97.373	Acanthochromis_polyacanthus
ENSSLDG00000012415	si:dkey-89b17.4	96	41.954	ENSACIG00000023049	znf646	94	54.545	Amphilophus_citrinellus
ENSSLDG00000012415	si:dkey-89b17.4	100	93.381	ENSACIG00000001025	si:dkey-89b17.4	100	93.062	Amphilophus_citrinellus
ENSSLDG00000012415	si:dkey-89b17.4	96	41.269	ENSAOCG00000012062	znf646	98	41.595	Amphiprion_ocellaris
ENSSLDG00000012415	si:dkey-89b17.4	100	97.532	ENSAOCG00000018684	si:dkey-89b17.4	100	97.532	Amphiprion_ocellaris
ENSSLDG00000012415	si:dkey-89b17.4	98	40.615	ENSAPEG00000006427	znf646	98	40.937	Amphiprion_percula
ENSSLDG00000012415	si:dkey-89b17.4	100	97.532	ENSAPEG00000007719	si:dkey-89b17.4	100	97.532	Amphiprion_percula
ENSSLDG00000012415	si:dkey-89b17.4	98	40.815	ENSATEG00000015206	znf646	98	41.482	Anabas_testudineus
ENSSLDG00000012415	si:dkey-89b17.4	100	96.895	ENSATEG00000016814	si:dkey-89b17.4	100	96.895	Anabas_testudineus
ENSSLDG00000012415	si:dkey-89b17.4	96	42.105	ENSACLG00000012712	znf646	98	42.412	Astatotilapia_calliptera
ENSSLDG00000012415	si:dkey-89b17.4	100	94.833	ENSACLG00000016017	si:dkey-89b17.4	100	94.754	Astatotilapia_calliptera
ENSSLDG00000012415	si:dkey-89b17.4	99	67.508	ENSAMXG00000001155	si:dkey-89b17.4	99	67.022	Astyanax_mexicanus
ENSSLDG00000012415	si:dkey-89b17.4	98	40.957	ENSAMXG00000035525	znf646	99	39.729	Astyanax_mexicanus
ENSSLDG00000012415	si:dkey-89b17.4	98	39.724	ENSCSEG00000012389	znf646	98	50.000	Cynoglossus_semilaevis
ENSSLDG00000012415	si:dkey-89b17.4	98	85.273	ENSCSEG00000010769	si:dkey-89b17.4	98	84.947	Cynoglossus_semilaevis
ENSSLDG00000012415	si:dkey-89b17.4	100	91.017	ENSCVAG00000012420	si:dkey-89b17.4	100	91.176	Cyprinodon_variegatus
ENSSLDG00000012415	si:dkey-89b17.4	99	66.337	ENSDARG00000075545	si:dkey-89b17.4	99	66.285	Danio_rerio
ENSSLDG00000012415	si:dkey-89b17.4	96	46.602	ENSDARG00000061424	znf646	98	46.429	Danio_rerio
ENSSLDG00000012415	si:dkey-89b17.4	96	75.196	ENSELUG00000015516	si:dkey-89b17.4	98	75.352	Esox_lucius
ENSSLDG00000012415	si:dkey-89b17.4	96	42.671	ENSELUG00000010423	znf646	98	43.328	Esox_lucius
ENSSLDG00000012415	si:dkey-89b17.4	100	90.960	ENSFHEG00000019457	si:dkey-89b17.4	100	91.594	Fundulus_heteroclitus
ENSSLDG00000012415	si:dkey-89b17.4	94	50.000	ENSFHEG00000000561	znf646	98	47.761	Fundulus_heteroclitus
ENSSLDG00000012415	si:dkey-89b17.4	98	60.377	ENSGMOG00000016554	znf646	99	60.377	Gadus_morhua
ENSSLDG00000012415	si:dkey-89b17.4	63	53.968	ENSGAFG00000016353	-	85	53.968	Gambusia_affinis
ENSSLDG00000012415	si:dkey-89b17.4	100	92.908	ENSGAFG00000000345	si:dkey-89b17.4	100	92.908	Gambusia_affinis
ENSSLDG00000012415	si:dkey-89b17.4	96	60.377	ENSGACG00000008733	znf646	98	60.377	Gasterosteus_aculeatus
ENSSLDG00000012415	si:dkey-89b17.4	98	77.419	ENSGACG00000014714	si:dkey-89b17.4	99	77.419	Gasterosteus_aculeatus
ENSSLDG00000012415	si:dkey-89b17.4	96	41.961	ENSHBUG00000004840	znf646	92	61.818	Haplochromis_burtoni
ENSSLDG00000012415	si:dkey-89b17.4	100	94.913	ENSHBUG00000013093	si:dkey-89b17.4	100	94.833	Haplochromis_burtoni
ENSSLDG00000012415	si:dkey-89b17.4	100	89.331	ENSHCOG00000001901	si:dkey-89b17.4	100	89.411	Hippocampus_comes
ENSSLDG00000012415	si:dkey-89b17.4	97	40.177	ENSHCOG00000014890	znf646	100	40.194	Hippocampus_comes
ENSSLDG00000012415	si:dkey-89b17.4	96	67.011	ENSIPUG00000012845	si:dkey-89b17.4	98	67.117	Ictalurus_punctatus
ENSSLDG00000012415	si:dkey-89b17.4	96	41.231	ENSIPUG00000018102	znf646	98	40.683	Ictalurus_punctatus
ENSSLDG00000012415	si:dkey-89b17.4	100	91.892	ENSKMAG00000014037	si:dkey-89b17.4	100	92.130	Kryptolebias_marmoratus
ENSSLDG00000012415	si:dkey-89b17.4	94	40.564	ENSKMAG00000011982	znf646	98	41.176	Kryptolebias_marmoratus
ENSSLDG00000012415	si:dkey-89b17.4	100	95.697	ENSLBEG00000020291	si:dkey-89b17.4	100	96.016	Labrus_bergylta
ENSSLDG00000012415	si:dkey-89b17.4	98	40.553	ENSLBEG00000016562	znf646	99	40.321	Labrus_bergylta
ENSSLDG00000012415	si:dkey-89b17.4	96	46.774	ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	Lepisosteus_oculatus
ENSSLDG00000012415	si:dkey-89b17.4	100	96.818	ENSMAMG00000009604	si:dkey-89b17.4	100	96.818	Mastacembelus_armatus
ENSSLDG00000012415	si:dkey-89b17.4	98	42.340	ENSMAMG00000009313	znf646	98	42.340	Mastacembelus_armatus
ENSSLDG00000012415	si:dkey-89b17.4	100	94.833	ENSMZEG00005003901	si:dkey-89b17.4	100	94.754	Maylandia_zebra
ENSSLDG00000012415	si:dkey-89b17.4	96	42.105	ENSMZEG00005011264	znf646	98	42.412	Maylandia_zebra
ENSSLDG00000012415	si:dkey-89b17.4	100	94.179	ENSMMOG00000012741	si:dkey-89b17.4	100	94.179	Mola_mola
ENSSLDG00000012415	si:dkey-89b17.4	97	42.009	ENSMMOG00000002311	znf646	100	42.114	Mola_mola
ENSSLDG00000012415	si:dkey-89b17.4	97	40.000	ENSMALG00000002274	-	99	40.000	Monopterus_albus
ENSSLDG00000012415	si:dkey-89b17.4	100	97.145	ENSMALG00000019558	si:dkey-89b17.4	100	97.145	Monopterus_albus
ENSSLDG00000012415	si:dkey-89b17.4	98	94.647	ENSNBRG00000020314	si:dkey-89b17.4	99	94.566	Neolamprologus_brichardi
ENSSLDG00000012415	si:dkey-89b17.4	96	42.052	ENSNBRG00000022534	znf646	98	42.281	Neolamprologus_brichardi
ENSSLDG00000012415	si:dkey-89b17.4	98	41.860	ENSONIG00000019947	-	99	36.567	Oreochromis_niloticus
ENSSLDG00000012415	si:dkey-89b17.4	95	71.503	ENSONIG00000009324	si:dkey-89b17.4	99	71.503	Oreochromis_niloticus
ENSSLDG00000012415	si:dkey-89b17.4	100	89.578	ENSORLG00000024255	si:dkey-89b17.4	100	89.340	Oryzias_latipes
ENSSLDG00000012415	si:dkey-89b17.4	96	38.510	ENSORLG00000007885	znf646	98	38.644	Oryzias_latipes
ENSSLDG00000012415	si:dkey-89b17.4	98	38.528	ENSORLG00020010285	znf646	98	38.819	Oryzias_latipes_hni
ENSSLDG00000012415	si:dkey-89b17.4	96	38.697	ENSORLG00015008733	znf646	98	38.498	Oryzias_latipes_hsok
ENSSLDG00000012415	si:dkey-89b17.4	100	89.825	ENSOMEG00000020587	si:dkey-89b17.4	100	89.587	Oryzias_melastigma
ENSSLDG00000012415	si:dkey-89b17.4	96	39.449	ENSOMEG00000015658	znf646	99	39.246	Oryzias_melastigma
ENSSLDG00000012415	si:dkey-89b17.4	88	52.459	ENSPMGG00000004639	znf646	98	35.393	Periophthalmus_magnuspinnatus
ENSSLDG00000012415	si:dkey-89b17.4	97	68.741	ENSPMGG00000015931	-	100	68.242	Periophthalmus_magnuspinnatus
ENSSLDG00000012415	si:dkey-89b17.4	100	92.681	ENSPFOG00000008241	si:dkey-89b17.4	100	92.840	Poecilia_formosa
ENSSLDG00000012415	si:dkey-89b17.4	95	37.647	ENSPFOG00000004826	-	99	38.679	Poecilia_formosa
ENSSLDG00000012415	si:dkey-89b17.4	97	40.037	ENSPLAG00000010454	-	98	32.327	Poecilia_latipinna
ENSSLDG00000012415	si:dkey-89b17.4	100	92.761	ENSPLAG00000011382	si:dkey-89b17.4	100	92.920	Poecilia_latipinna
ENSSLDG00000012415	si:dkey-89b17.4	100	92.681	ENSPMEG00000000141	si:dkey-89b17.4	100	92.840	Poecilia_mexicana
ENSSLDG00000012415	si:dkey-89b17.4	98	39.483	ENSPMEG00000018283	znf646	98	36.170	Poecilia_mexicana
ENSSLDG00000012415	si:dkey-89b17.4	100	92.920	ENSPREG00000012579	si:dkey-89b17.4	100	93.079	Poecilia_reticulata
ENSSLDG00000012415	si:dkey-89b17.4	97	46.341	ENSPREG00000017637	znf646	98	37.915	Poecilia_reticulata
ENSSLDG00000012415	si:dkey-89b17.4	96	41.948	ENSPNYG00000017692	znf646	98	42.412	Pundamilia_nyererei
ENSSLDG00000012415	si:dkey-89b17.4	100	94.913	ENSPNYG00000011901	si:dkey-89b17.4	100	94.833	Pundamilia_nyererei
ENSSLDG00000012415	si:dkey-89b17.4	96	67.031	ENSPNAG00000022072	si:dkey-89b17.4	98	66.615	Pygocentrus_nattereri
ENSSLDG00000012415	si:dkey-89b17.4	96	41.717	ENSPNAG00000000750	znf646	98	41.382	Pygocentrus_nattereri
ENSSLDG00000012415	si:dkey-89b17.4	98	39.336	ENSSFOG00015004737	si:dkey-89b17.4	98	63.265	Scleropages_formosus
ENSSLDG00000012415	si:dkey-89b17.4	98	41.660	ENSSMAG00000012378	znf646	98	41.501	Scophthalmus_maximus
ENSSLDG00000012415	si:dkey-89b17.4	98	42.052	ENSSDUG00000002675	znf646	98	42.000	Seriola_dumerili
ENSSLDG00000012415	si:dkey-89b17.4	100	99.920	ENSSDUG00000015931	si:dkey-89b17.4	100	99.920	Seriola_dumerili
ENSSLDG00000012415	si:dkey-89b17.4	100	97.373	ENSSPAG00000018810	si:dkey-89b17.4	100	97.373	Stegastes_partitus
ENSSLDG00000012415	si:dkey-89b17.4	98	42.105	ENSSPAG00000016701	znf646	98	60.714	Stegastes_partitus
ENSSLDG00000012415	si:dkey-89b17.4	100	41.355	ENSTRUG00000025597	znf646	98	40.545	Takifugu_rubripes
ENSSLDG00000012415	si:dkey-89b17.4	100	91.467	ENSTRUG00000020495	si:dkey-89b17.4	100	91.547	Takifugu_rubripes
ENSSLDG00000012415	si:dkey-89b17.4	96	42.689	ENSTNIG00000000073	znf646	99	51.667	Tetraodon_nigroviridis
ENSSLDG00000012415	si:dkey-89b17.4	96	43.056	ENSTNIG00000001159	si:dkey-89b17.4	98	41.860	Tetraodon_nigroviridis
ENSSLDG00000012415	si:dkey-89b17.4	97	38.147	ENSXCOG00000002714	-	95	37.602	Xiphophorus_couchianus
ENSSLDG00000012415	si:dkey-89b17.4	100	90.837	ENSXCOG00000001645	si:dkey-89b17.4	100	90.837	Xiphophorus_couchianus
ENSSLDG00000012415	si:dkey-89b17.4	100	93.068	ENSXMAG00000024528	si:dkey-89b17.4	100	93.068	Xiphophorus_maculatus
ENSSLDG00000012415	si:dkey-89b17.4	98	38.692	ENSXMAG00000018743	-	96	38.172	Xiphophorus_maculatus