EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000012422 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10310 bases
Position: chrPEQF01094759.1:480326-490635
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015680	MBD	PF01429.19	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016288	-	1821	-	ENSSLDP00000015708	606 (aa)	-	-
ENSSLDT00000016261	-	1920	-	ENSSLDP00000015680	639 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000012422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012422's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012422	mbd1b	98	57.356	ENSAPOG00000012810	mbd1b	83	57.569	Acanthochromis_polyacanthus
ENSSLDG00000012422	mbd1b	98	57.143	ENSACIG00000010590	mbd1b	89	54.815	Amphilophus_citrinellus
ENSSLDG00000012422	mbd1b	98	58.761	ENSAOCG00000020272	mbd1b	83	59.275	Amphiprion_ocellaris
ENSSLDG00000012422	mbd1b	98	60.768	ENSAPEG00000023230	mbd1b	83	60.981	Amphiprion_percula
ENSSLDG00000012422	mbd1b	84	85.987	ENSATEG00000009608	mbd1b	83	58.268	Anabas_testudineus
ENSSLDG00000012422	mbd1b	95	86.452	ENSACLG00000021383	mbd1b	86	60.944	Astatotilapia_calliptera
ENSSLDG00000012422	mbd1b	82	66.225	ENSCSEG00000009082	mbd1b	74	66.443	Cynoglossus_semilaevis
ENSSLDG00000012422	mbd1b	93	70.857	ENSCVAG00000001167	mbd1b	72	70.857	Cyprinodon_variegatus
ENSSLDG00000012422	mbd1b	86	54.140	ENSDARG00000025699	mbd1b	60	54.140	Danio_rerio
ENSSLDG00000012422	mbd1b	75	62.338	ENSELUG00000004375	mbd1b	76	52.500	Esox_lucius
ENSSLDG00000012422	mbd1b	99	55.940	ENSFHEG00000020120	mbd1b	83	57.667	Fundulus_heteroclitus
ENSSLDG00000012422	mbd1b	98	59.729	ENSGAFG00000008975	mbd1b	82	59.091	Gambusia_affinis
ENSSLDG00000012422	mbd1b	70	47.643	ENSGACG00000012106	-	99	48.653	Gasterosteus_aculeatus
ENSSLDG00000012422	mbd1b	99	61.966	ENSHBUG00000014270	mbd1b	86	62.179	Haplochromis_burtoni
ENSSLDG00000012422	mbd1b	87	53.030	ENSHCOG00000009952	mbd1b	76	55.102	Hippocampus_comes
ENSSLDG00000012422	mbd1b	81	51.299	ENSIPUG00000015243	-	75	53.247	Ictalurus_punctatus
ENSSLDG00000012422	mbd1b	100	58.004	ENSKMAG00000020760	mbd1b	87	57.588	Kryptolebias_marmoratus
ENSSLDG00000012422	mbd1b	69	31.250	ENSLACG00000002414	-	94	31.070	Latimeria_chalumnae
ENSSLDG00000012422	mbd1b	69	67.568	ENSMAMG00000023341	-	66	67.117	Mastacembelus_armatus
ENSSLDG00000012422	mbd1b	95	86.452	ENSMZEG00005010421	mbd1b	86	60.944	Maylandia_zebra
ENSSLDG00000012422	mbd1b	100	57.183	ENSMMOG00000011607	mbd1b	100	56.338	Mola_mola
ENSSLDG00000012422	mbd1b	68	50.769	ENSMODG00000001286	-	61	46.250	Monodelphis_domestica
ENSSLDG00000012422	mbd1b	98	64.681	ENSMALG00000007808	mbd1b	83	64.681	Monopterus_albus
ENSSLDG00000012422	mbd1b	79	88.387	ENSONIG00000020289	mbd1b	69	88.387	Oreochromis_niloticus
ENSSLDG00000012422	mbd1b	93	77.922	ENSORLG00000029390	mbd1b	72	77.922	Oryzias_latipes
ENSSLDG00000012422	mbd1b	93	77.922	ENSORLG00020000575	mbd1b	72	77.922	Oryzias_latipes_hni
ENSSLDG00000012422	mbd1b	93	78.571	ENSORLG00015014812	mbd1b	72	78.571	Oryzias_latipes_hsok
ENSSLDG00000012422	mbd1b	94	74.522	ENSOMEG00000023660	mbd1b	73	74.522	Oryzias_melastigma
ENSSLDG00000012422	mbd1b	80	75.796	ENSPFOG00000007511	mbd1b	82	58.730	Poecilia_formosa
ENSSLDG00000012422	mbd1b	82	65.942	ENSPLAG00000021258	mbd1b	82	58.770	Poecilia_latipinna
ENSSLDG00000012422	mbd1b	82	65.942	ENSPMEG00000024145	mbd1b	73	65.333	Poecilia_mexicana
ENSSLDG00000012422	mbd1b	94	59.909	ENSPREG00000021805	mbd1b	73	65.333	Poecilia_reticulata
ENSSLDG00000012422	mbd1b	86	44.809	ENSPNAG00000018075	mbd1b	74	53.103	Pygocentrus_nattereri
ENSSLDG00000012422	mbd1b	98	48.477	ENSSFOG00015008591	-	68	49.660	Scleropages_formosus
ENSSLDG00000012422	mbd1b	76	85.987	ENSSMAG00000014640	mbd1b	57	85.987	Scophthalmus_maximus
ENSSLDG00000012422	mbd1b	93	100.000	ENSSDUG00000012996	mbd1b	74	100.000	Seriola_dumerili
ENSSLDG00000012422	mbd1b	98	68.345	ENSSPAG00000021447	mbd1b	81	69.065	Stegastes_partitus
ENSSLDG00000012422	mbd1b	95	83.673	ENSTRUG00000013422	mbd1b	77	83.673	Takifugu_rubripes
ENSSLDG00000012422	mbd1b	65	79.279	ENSTNIG00000007326	-	57	79.279	Tetraodon_nigroviridis
ENSSLDG00000012422	mbd1b	99	58.998	ENSXMAG00000005628	mbd1b	82	58.770	Xiphophorus_maculatus