EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012473 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7917 bases
Position: chrPEQF01098904.1:1999554-2007470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015724	S10_plectin	PF03501.15	6e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016305	-	471	-	ENSSLDP00000015724	156 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000012473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012473	-	87	60.741	ENSSLDG00000016257	-	72	60.741
ENSSLDG00000012473	-	63	66.337	ENSSLDG00000005134	rps10	97	48.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012473	-	69	60.748	ENSAPOG00000016494	-	55	60.748	Acanthochromis_polyacanthus
ENSSLDG00000012473	-	76	89.916	ENSAPOG00000014059	-	82	89.916	Acanthochromis_polyacanthus
ENSSLDG00000012473	-	92	87.413	ENSACIG00000013806	-	83	86.000	Amphilophus_citrinellus
ENSSLDG00000012473	-	77	60.833	ENSACIG00000019704	-	58	60.833	Amphilophus_citrinellus
ENSSLDG00000012473	-	89	89.209	ENSAOCG00000011000	-	81	89.209	Amphiprion_ocellaris
ENSSLDG00000012473	-	71	63.063	ENSAOCG00000007730	-	65	63.063	Amphiprion_ocellaris
ENSSLDG00000012473	-	56	57.955	ENSAPEG00000017745	-	56	57.955	Amphiprion_percula
ENSSLDG00000012473	-	69	90.741	ENSAPEG00000019531	-	61	90.741	Amphiprion_percula
ENSSLDG00000012473	-	65	69.608	ENSATEG00000004340	-	72	69.608	Anabas_testudineus
ENSSLDG00000012473	-	78	59.836	ENSACLG00000001013	-	67	59.836	Astatotilapia_calliptera
ENSSLDG00000012473	-	80	83.200	ENSAMXG00000037914	-	75	83.200	Astyanax_mexicanus
ENSSLDG00000012473	-	60	54.255	WBGene00004479	rps-10	62	54.255	Caenorhabditis_elegans
ENSSLDG00000012473	-	65	61.165	ENSCING00000006180	-	64	61.165	Ciona_intestinalis
ENSSLDG00000012473	-	89	87.770	ENSCSEG00000009179	-	82	87.770	Cynoglossus_semilaevis
ENSSLDG00000012473	-	65	56.436	FBgn0027494	RpS10a	61	56.436	Drosophila_melanogaster
ENSSLDG00000012473	-	76	56.780	FBgn0285947	RpS10b	71	56.780	Drosophila_melanogaster
ENSSLDG00000012473	-	99	46.452	ENSEBUG00000015221	-	95	46.452	Eptatretus_burgeri
ENSSLDG00000012473	-	83	64.341	ENSEASG00005009727	-	54	64.341	Equus_asinus_asinus
ENSSLDG00000012473	-	89	85.612	ENSFHEG00000008769	-	87	85.612	Fundulus_heteroclitus
ENSSLDG00000012473	-	96	74.843	ENSGAFG00000001335	-	81	74.843	Gambusia_affinis
ENSSLDG00000012473	-	84	91.603	ENSHBUG00000023819	-	79	91.603	Haplochromis_burtoni
ENSSLDG00000012473	-	78	59.836	ENSHBUG00000018067	-	67	59.836	Haplochromis_burtoni
ENSSLDG00000012473	-	85	66.418	ENSLBEG00000020432	-	84	66.418	Labrus_bergylta
ENSSLDG00000012473	-	79	67.200	ENSLACG00000010998	-	72	67.200	Latimeria_chalumnae
ENSSLDG00000012473	-	78	59.836	ENSMZEG00005026198	-	67	59.836	Maylandia_zebra
ENSSLDG00000012473	-	84	91.603	ENSMZEG00005007838	-	79	91.603	Maylandia_zebra
ENSSLDG00000012473	-	72	77.869	ENSMMOG00000003228	-	69	77.869	Mola_mola
ENSSLDG00000012473	-	81	63.492	ENSMMOG00000014380	-	62	63.492	Mola_mola
ENSSLDG00000012473	-	78	61.475	ENSMALG00000015614	-	76	61.475	Monopterus_albus
ENSSLDG00000012473	-	89	53.957	ENSNBRG00000016554	-	76	53.957	Neolamprologus_brichardi
ENSSLDG00000012473	-	81	92.063	ENSNBRG00000008848	-	97	88.489	Neolamprologus_brichardi
ENSSLDG00000012473	-	91	71.329	ENSPKIG00000013061	-	79	71.329	Paramormyrops_kingsleyae
ENSSLDG00000012473	-	89	86.331	ENSPMGG00000017071	-	74	86.331	Periophthalmus_magnuspinnatus
ENSSLDG00000012473	-	66	62.136	ENSPMAG00000003064	-	64	62.136	Petromyzon_marinus
ENSSLDG00000012473	-	63	71.717	ENSPMAG00000010266	-	53	71.717	Petromyzon_marinus
ENSSLDG00000012473	-	71	85.455	ENSPLAG00000012690	-	65	85.455	Poecilia_latipinna
ENSSLDG00000012473	-	78	59.016	ENSPNYG00000006286	-	67	59.016	Pundamilia_nyererei
ENSSLDG00000012473	-	84	90.840	ENSPNYG00000012665	-	79	90.840	Pundamilia_nyererei
ENSSLDG00000012473	-	91	61.806	ENSPNAG00000021290	-	75	61.806	Pygocentrus_nattereri
ENSSLDG00000012473	-	64	46.000	YMR230W	RPS10B	93	46.000	Saccharomyces_cerevisiae
ENSSLDG00000012473	-	64	47.000	YOR293W	RPS10A	93	47.000	Saccharomyces_cerevisiae
ENSSLDG00000012473	-	64	78.218	ENSSFOG00015012004	-	57	78.218	Scleropages_formosus
ENSSLDG00000012473	-	91	68.310	ENSSFOG00015009603	-	71	68.310	Scleropages_formosus
ENSSLDG00000012473	-	80	64.000	ENSSDUG00000011052	-	75	64.000	Seriola_dumerili
ENSSLDG00000012473	-	99	93.506	ENSSDUG00000010997	-	88	93.506	Seriola_dumerili
ENSSLDG00000012473	-	62	67.708	ENSSPAG00000012512	-	50	67.708	Stegastes_partitus
ENSSLDG00000012473	-	74	83.621	ENSSPAG00000015615	-	91	83.621	Stegastes_partitus
ENSSLDG00000012473	-	63	76.768	ENSSSCG00000033521	-	61	76.768	Sus_scrofa
ENSSLDG00000012473	-	79	65.873	ENSXETG00000032983	-	66	68.254	Xenopus_tropicalis
ENSSLDG00000012473	-	94	85.034	ENSXCOG00000016917	-	91	85.034	Xiphophorus_couchianus
ENSSLDG00000012473	-	71	71.901	ENSXMAG00000029046	-	70	71.901	Xiphophorus_maculatus