EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000012485 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4339 bases
Position: chrPEQF01097408.1:419726-424064
Accession: 111650788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015837	RNase_H2-Ydr279	PF09468.10	6.3e-17	1	1
ENSSLDP00000015802	RNase_H2-Ydr279	PF09468.10	4.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016385	-	900	XM_023400701	ENSSLDP00000015802	299 (aa)	XP_023256469	-
ENSSLDT00000016421	-	900	-	ENSSLDP00000015837	299 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000012485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012485	rnaseh2b	92	51.439	ENSG00000136104	RNASEH2B	99	52.381	Homo_sapiens
ENSSLDG00000012485	rnaseh2b	100	88.274	ENSAPOG00000010496	rnaseh2b	100	88.274	Acanthochromis_polyacanthus
ENSSLDG00000012485	rnaseh2b	92	50.178	ENSAMEG00000012040	RNASEH2B	95	51.957	Ailuropoda_melanoleuca
ENSSLDG00000012485	rnaseh2b	100	76.254	ENSACIG00000021991	rnaseh2b	99	78.713	Amphilophus_citrinellus
ENSSLDG00000012485	rnaseh2b	100	88.274	ENSAOCG00000013398	rnaseh2b	100	88.274	Amphiprion_ocellaris
ENSSLDG00000012485	rnaseh2b	100	87.948	ENSAPEG00000006033	rnaseh2b	100	87.948	Amphiprion_percula
ENSSLDG00000012485	rnaseh2b	100	87.296	ENSATEG00000008370	rnaseh2b	100	87.296	Anabas_testudineus
ENSSLDG00000012485	rnaseh2b	82	65.854	ENSAPLG00000008955	RNASEH2B	99	64.945	Anas_platyrhynchos
ENSSLDG00000012485	rnaseh2b	93	57.241	ENSACAG00000011679	RNASEH2B	97	57.241	Anolis_carolinensis
ENSSLDG00000012485	rnaseh2b	92	51.079	ENSANAG00000020662	RNASEH2B	89	52.158	Aotus_nancymaae
ENSSLDG00000012485	rnaseh2b	100	81.433	ENSACLG00000000467	rnaseh2b	100	81.433	Astatotilapia_calliptera
ENSSLDG00000012485	rnaseh2b	99	67.752	ENSAMXG00000014351	rnaseh2b	99	67.752	Astyanax_mexicanus
ENSSLDG00000012485	rnaseh2b	90	52.688	ENSBTAG00000020149	RNASEH2B	90	52.688	Bos_taurus
ENSSLDG00000012485	rnaseh2b	92	50.725	ENSCJAG00000008585	-	91	50.725	Callithrix_jacchus
ENSSLDG00000012485	rnaseh2b	74	45.701	ENSCJAG00000003822	-	82	47.085	Callithrix_jacchus
ENSSLDG00000012485	rnaseh2b	98	48.039	ENSCAFG00000004295	RNASEH2B	93	48.951	Canis_familiaris
ENSSLDG00000012485	rnaseh2b	92	50.000	ENSCAFG00020000250	RNASEH2B	90	51.799	Canis_lupus_dingo
ENSSLDG00000012485	rnaseh2b	76	50.431	ENSCHIG00000012982	-	82	50.431	Capra_hircus
ENSSLDG00000012485	rnaseh2b	96	48.443	ENSCHIG00000018220	RNASEH2B	94	48.443	Capra_hircus
ENSSLDG00000012485	rnaseh2b	90	51.799	ENSTSYG00000009176	-	90	51.799	Carlito_syrichta
ENSSLDG00000012485	rnaseh2b	92	42.238	ENSTSYG00000031177	-	90	43.841	Carlito_syrichta
ENSSLDG00000012485	rnaseh2b	92	42.446	ENSCAPG00000009978	RNASEH2B	94	43.416	Cavia_aperea
ENSSLDG00000012485	rnaseh2b	92	48.029	ENSCPOG00000032527	RNASEH2B	89	49.462	Cavia_porcellus
ENSSLDG00000012485	rnaseh2b	92	51.087	ENSCCAG00000026979	RNASEH2B	91	52.536	Cebus_capucinus
ENSSLDG00000012485	rnaseh2b	90	51.292	ENSCATG00000031336	RNASEH2B	76	52.399	Cercocebus_atys
ENSSLDG00000012485	rnaseh2b	92	51.799	ENSCLAG00000003517	RNASEH2B	76	52.878	Chinchilla_lanigera
ENSSLDG00000012485	rnaseh2b	91	50.362	ENSCSAG00000017701	RNASEH2B	83	51.449	Chlorocebus_sabaeus
ENSSLDG00000012485	rnaseh2b	95	42.321	ENSCHOG00000013688	RNASEH2B	95	43.197	Choloepus_hoffmanni
ENSSLDG00000012485	rnaseh2b	99	59.740	ENSCPBG00000008684	RNASEH2B	95	59.740	Chrysemys_picta_bellii
ENSSLDG00000012485	rnaseh2b	93	34.843	ENSCING00000016454	-	93	34.843	Ciona_intestinalis
ENSSLDG00000012485	rnaseh2b	92	50.534	ENSCANG00000041511	-	89	51.601	Colobus_angolensis_palliatus
ENSSLDG00000012485	rnaseh2b	92	51.439	ENSCGRG00001000611	Rnaseh2b	90	53.237	Cricetulus_griseus_chok1gshd
ENSSLDG00000012485	rnaseh2b	92	51.439	ENSCGRG00000006077	Rnaseh2b	90	53.237	Cricetulus_griseus_crigri
ENSSLDG00000012485	rnaseh2b	100	81.605	ENSCSEG00000004910	rnaseh2b	100	81.605	Cynoglossus_semilaevis
ENSSLDG00000012485	rnaseh2b	100	81.759	ENSCVAG00000005212	rnaseh2b	100	81.759	Cyprinodon_variegatus
ENSSLDG00000012485	rnaseh2b	99	70.261	ENSDARG00000005128	rnaseh2b	99	70.261	Danio_rerio
ENSSLDG00000012485	rnaseh2b	92	46.570	ENSDNOG00000034290	-	90	46.570	Dasypus_novemcinctus
ENSSLDG00000012485	rnaseh2b	92	49.104	ENSDNOG00000049666	-	90	49.104	Dasypus_novemcinctus
ENSSLDG00000012485	rnaseh2b	99	50.000	ENSDORG00000010708	Rnaseh2b	98	50.000	Dipodomys_ordii
ENSSLDG00000012485	rnaseh2b	87	38.931	ENSEBUG00000005965	rnaseh2b	99	38.931	Eptatretus_burgeri
ENSSLDG00000012485	rnaseh2b	92	51.799	ENSEASG00005017323	RNASEH2B	90	51.799	Equus_asinus_asinus
ENSSLDG00000012485	rnaseh2b	92	52.158	ENSECAG00000014262	RNASEH2B	90	52.158	Equus_caballus
ENSSLDG00000012485	rnaseh2b	100	75.649	ENSELUG00000019560	rnaseh2b	100	75.649	Esox_lucius
ENSSLDG00000012485	rnaseh2b	90	49.077	ENSFCAG00000014257	RNASEH2B	84	50.923	Felis_catus
ENSSLDG00000012485	rnaseh2b	90	62.950	ENSFALG00000008435	RNASEH2B	94	62.950	Ficedula_albicollis
ENSSLDG00000012485	rnaseh2b	92	49.640	ENSFDAG00000009920	RNASEH2B	97	49.640	Fukomys_damarensis
ENSSLDG00000012485	rnaseh2b	100	84.039	ENSFHEG00000012160	rnaseh2b	100	84.039	Fundulus_heteroclitus
ENSSLDG00000012485	rnaseh2b	100	72.459	ENSGMOG00000016830	rnaseh2b	100	72.459	Gadus_morhua
ENSSLDG00000012485	rnaseh2b	95	59.386	ENSGALG00000017015	RNASEH2B	100	59.740	Gallus_gallus
ENSSLDG00000012485	rnaseh2b	100	83.062	ENSGAFG00000021222	rnaseh2b	100	83.062	Gambusia_affinis
ENSSLDG00000012485	rnaseh2b	100	80.449	ENSGACG00000002821	rnaseh2b	100	80.449	Gasterosteus_aculeatus
ENSSLDG00000012485	rnaseh2b	90	62.366	ENSGAGG00000014722	RNASEH2B	99	62.366	Gopherus_agassizii
ENSSLDG00000012485	rnaseh2b	92	50.890	ENSGGOG00000001044	RNASEH2B	90	50.890	Gorilla_gorilla
ENSSLDG00000012485	rnaseh2b	100	82.085	ENSHBUG00000006049	rnaseh2b	100	82.085	Haplochromis_burtoni
ENSSLDG00000012485	rnaseh2b	92	50.360	ENSHGLG00100015953	RNASEH2B	95	50.360	Heterocephalus_glaber_male
ENSSLDG00000012485	rnaseh2b	100	75.748	ENSHCOG00000003318	rnaseh2b	100	75.748	Hippocampus_comes
ENSSLDG00000012485	rnaseh2b	100	72.727	ENSIPUG00000023815	rnaseh2b	100	72.727	Ictalurus_punctatus
ENSSLDG00000012485	rnaseh2b	90	53.069	ENSSTOG00000015126	RNASEH2B	94	53.069	Ictidomys_tridecemlineatus
ENSSLDG00000012485	rnaseh2b	92	50.719	ENSJJAG00000013335	Rnaseh2b	94	50.719	Jaculus_jaculus
ENSSLDG00000012485	rnaseh2b	100	83.713	ENSKMAG00000002198	rnaseh2b	100	83.713	Kryptolebias_marmoratus
ENSSLDG00000012485	rnaseh2b	100	83.713	ENSLBEG00000019331	rnaseh2b	100	83.713	Labrus_bergylta
ENSSLDG00000012485	rnaseh2b	70	65.094	ENSLACG00000010782	RNASEH2B	92	64.912	Latimeria_chalumnae
ENSSLDG00000012485	rnaseh2b	100	69.481	ENSLOCG00000009296	rnaseh2b	100	69.481	Lepisosteus_oculatus
ENSSLDG00000012485	rnaseh2b	92	49.281	ENSLAFG00000030158	RNASEH2B	90	50.719	Loxodonta_africana
ENSSLDG00000012485	rnaseh2b	92	51.079	ENSMFAG00000038464	-	89	52.158	Macaca_fascicularis
ENSSLDG00000012485	rnaseh2b	92	46.403	ENSMMUG00000021746	RNASEH2B	88	48.014	Macaca_mulatta
ENSSLDG00000012485	rnaseh2b	92	51.079	ENSMNEG00000030580	RNASEH2B	89	52.158	Macaca_nemestrina
ENSSLDG00000012485	rnaseh2b	92	50.534	ENSMLEG00000043911	-	89	51.601	Mandrillus_leucophaeus
ENSSLDG00000012485	rnaseh2b	100	87.296	ENSMAMG00000017109	rnaseh2b	100	87.296	Mastacembelus_armatus
ENSSLDG00000012485	rnaseh2b	100	81.126	ENSMZEG00005021926	rnaseh2b	100	81.788	Maylandia_zebra
ENSSLDG00000012485	rnaseh2b	85	62.500	ENSMGAG00000015025	RNASEH2B	97	62.724	Meleagris_gallopavo
ENSSLDG00000012485	rnaseh2b	90	51.986	ENSMAUG00000016520	Rnaseh2b	90	52.330	Mesocricetus_auratus
ENSSLDG00000012485	rnaseh2b	92	50.000	ENSMICG00000000528	RNASEH2B	90	50.000	Microcebus_murinus
ENSSLDG00000012485	rnaseh2b	99	82.667	ENSMMOG00000019799	rnaseh2b	100	85.366	Mola_mola
ENSSLDG00000012485	rnaseh2b	98	55.776	ENSMODG00000010775	RNASEH2B	99	55.776	Monodelphis_domestica
ENSSLDG00000012485	rnaseh2b	99	85.948	ENSMALG00000004463	rnaseh2b	100	85.948	Monopterus_albus
ENSSLDG00000012485	rnaseh2b	74	56.306	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	57.658	Mus_caroli
ENSSLDG00000012485	rnaseh2b	90	53.333	ENSMUSG00000021932	Rnaseh2b	89	53.791	Mus_musculus
ENSSLDG00000012485	rnaseh2b	92	41.846	MGP_PahariEiJ_G0030407	-	93	41.846	Mus_pahari
ENSSLDG00000012485	rnaseh2b	73	47.032	ENSMPUG00000018010	RNASEH2B	91	48.858	Mustela_putorius_furo
ENSSLDG00000012485	rnaseh2b	92	52.857	ENSMLUG00000004065	-	89	54.286	Myotis_lucifugus
ENSSLDG00000012485	rnaseh2b	100	81.063	ENSNBRG00000003253	rnaseh2b	100	81.063	Neolamprologus_brichardi
ENSSLDG00000012485	rnaseh2b	92	50.890	ENSNLEG00000003804	RNASEH2B	90	50.890	Nomascus_leucogenys
ENSSLDG00000012485	rnaseh2b	93	56.537	ENSMEUG00000003665	RNASEH2B	97	56.890	Notamacropus_eugenii
ENSSLDG00000012485	rnaseh2b	53	51.875	ENSOPRG00000003695	-	51	53.374	Ochotona_princeps
ENSSLDG00000012485	rnaseh2b	92	51.079	ENSODEG00000006793	-	90	51.079	Octodon_degus
ENSSLDG00000012485	rnaseh2b	75	48.684	ENSODEG00000005412	-	91	48.684	Octodon_degus
ENSSLDG00000012485	rnaseh2b	100	80.782	ENSONIG00000006657	rnaseh2b	100	82.085	Oreochromis_niloticus
ENSSLDG00000012485	rnaseh2b	90	58.993	ENSOANG00000015537	RNASEH2B	98	57.895	Ornithorhynchus_anatinus
ENSSLDG00000012485	rnaseh2b	91	48.718	ENSOCUG00000008904	RNASEH2B	85	51.103	Oryctolagus_cuniculus
ENSSLDG00000012485	rnaseh2b	99	77.558	ENSORLG00000011850	rnaseh2b	100	77.558	Oryzias_latipes
ENSSLDG00000012485	rnaseh2b	99	77.888	ENSORLG00020012081	rnaseh2b	100	77.888	Oryzias_latipes_hni
ENSSLDG00000012485	rnaseh2b	99	77.558	ENSORLG00015015468	rnaseh2b	100	77.558	Oryzias_latipes_hsok
ENSSLDG00000012485	rnaseh2b	99	79.868	ENSOMEG00000012441	rnaseh2b	100	79.868	Oryzias_melastigma
ENSSLDG00000012485	rnaseh2b	92	50.534	ENSOGAG00000016486	RNASEH2B	94	50.534	Otolemur_garnettii
ENSSLDG00000012485	rnaseh2b	92	50.362	ENSOARG00000008701	RNASEH2B	93	52.174	Ovis_aries
ENSSLDG00000012485	rnaseh2b	90	52.015	ENSPPAG00000026374	RNASEH2B	93	49.765	Pan_paniscus
ENSSLDG00000012485	rnaseh2b	92	48.582	ENSPPRG00000012450	RNASEH2B	92	50.355	Panthera_pardus
ENSSLDG00000012485	rnaseh2b	90	50.000	ENSPTIG00000013918	RNASEH2B	97	51.648	Panthera_tigris_altaica
ENSSLDG00000012485	rnaseh2b	92	50.890	ENSPTRG00000005886	RNASEH2B	95	55.823	Pan_troglodytes
ENSSLDG00000012485	rnaseh2b	90	51.648	ENSPANG00000022424	-	89	51.601	Papio_anubis
ENSSLDG00000012485	rnaseh2b	100	69.156	ENSPKIG00000013386	rnaseh2b	100	69.156	Paramormyrops_kingsleyae
ENSSLDG00000012485	rnaseh2b	59	56.831	ENSPSIG00000002224	RNASEH2B	85	56.831	Pelodiscus_sinensis
ENSSLDG00000012485	rnaseh2b	67	80.100	ENSPMGG00000010299	rnaseh2b	98	80.100	Periophthalmus_magnuspinnatus
ENSSLDG00000012485	rnaseh2b	92	51.439	ENSPEMG00000019721	Rnaseh2b	90	51.786	Peromyscus_maniculatus_bairdii
ENSSLDG00000012485	rnaseh2b	93	55.052	ENSPCIG00000014535	-	96	55.052	Phascolarctos_cinereus
ENSSLDG00000012485	rnaseh2b	100	83.495	ENSPFOG00000016722	rnaseh2b	100	83.495	Poecilia_formosa
ENSSLDG00000012485	rnaseh2b	100	83.713	ENSPLAG00000011755	rnaseh2b	100	83.713	Poecilia_latipinna
ENSSLDG00000012485	rnaseh2b	100	83.713	ENSPMEG00000002721	rnaseh2b	100	83.713	Poecilia_mexicana
ENSSLDG00000012485	rnaseh2b	100	83.062	ENSPREG00000007737	rnaseh2b	100	83.062	Poecilia_reticulata
ENSSLDG00000012485	rnaseh2b	92	50.890	ENSPPYG00000005378	RNASEH2B	90	50.890	Pongo_abelii
ENSSLDG00000012485	rnaseh2b	92	50.538	ENSPCOG00000026623	RNASEH2B	90	50.538	Propithecus_coquereli
ENSSLDG00000012485	rnaseh2b	81	49.796	ENSPVAG00000000508	RNASEH2B	92	52.245	Pteropus_vampyrus
ENSSLDG00000012485	rnaseh2b	100	81.759	ENSPNYG00000013552	rnaseh2b	100	81.759	Pundamilia_nyererei
ENSSLDG00000012485	rnaseh2b	99	68.404	ENSPNAG00000024825	rnaseh2b	99	68.404	Pygocentrus_nattereri
ENSSLDG00000012485	rnaseh2b	90	51.601	ENSRNOG00000009192	Rnaseh2b	90	51.601	Rattus_norvegicus
ENSSLDG00000012485	rnaseh2b	91	46.263	ENSRBIG00000036017	-	92	46.263	Rhinopithecus_bieti
ENSSLDG00000012485	rnaseh2b	92	50.719	ENSRBIG00000028928	-	90	50.719	Rhinopithecus_bieti
ENSSLDG00000012485	rnaseh2b	92	50.719	ENSRROG00000018808	-	90	50.719	Rhinopithecus_roxellana
ENSSLDG00000012485	rnaseh2b	72	40.991	ENSRROG00000044915	-	83	41.553	Rhinopithecus_roxellana
ENSSLDG00000012485	rnaseh2b	92	51.087	ENSSBOG00000008081	RNASEH2B	96	53.160	Saimiri_boliviensis_boliviensis
ENSSLDG00000012485	rnaseh2b	100	56.129	ENSSHAG00000016190	RNASEH2B	100	56.818	Sarcophilus_harrisii
ENSSLDG00000012485	rnaseh2b	99	71.010	ENSSFOG00015010190	rnaseh2b	100	71.010	Scleropages_formosus
ENSSLDG00000012485	rnaseh2b	100	86.601	ENSSMAG00000001546	rnaseh2b	100	86.601	Scophthalmus_maximus
ENSSLDG00000012485	rnaseh2b	100	95.440	ENSSDUG00000007567	rnaseh2b	100	95.440	Seriola_dumerili
ENSSLDG00000012485	rnaseh2b	89	55.390	ENSSPUG00000006745	-	96	55.390	Sphenodon_punctatus
ENSSLDG00000012485	rnaseh2b	100	87.948	ENSSPAG00000020926	rnaseh2b	100	87.948	Stegastes_partitus
ENSSLDG00000012485	rnaseh2b	89	52.222	ENSSSCG00000024385	RNASEH2B	95	56.098	Sus_scrofa
ENSSLDG00000012485	rnaseh2b	88	64.207	ENSTGUG00000012104	RNASEH2B	99	64.207	Taeniopygia_guttata
ENSSLDG00000012485	rnaseh2b	100	82.410	ENSTRUG00000015098	rnaseh2b	100	82.410	Takifugu_rubripes
ENSSLDG00000012485	rnaseh2b	100	80.519	ENSTNIG00000013861	rnaseh2b	100	80.519	Tetraodon_nigroviridis
ENSSLDG00000012485	rnaseh2b	92	43.728	ENSTTRG00000010761	RNASEH2B	90	44.964	Tursiops_truncatus
ENSSLDG00000012485	rnaseh2b	92	51.079	ENSUAMG00000022849	RNASEH2B	96	53.903	Ursus_americanus
ENSSLDG00000012485	rnaseh2b	92	50.360	ENSUMAG00000018556	RNASEH2B	96	53.160	Ursus_maritimus
ENSSLDG00000012485	rnaseh2b	92	52.347	ENSVPAG00000005679	RNASEH2B	96	52.347	Vicugna_pacos
ENSSLDG00000012485	rnaseh2b	92	50.360	ENSVVUG00000024015	RNASEH2B	83	51.079	Vulpes_vulpes
ENSSLDG00000012485	rnaseh2b	99	57.143	ENSXETG00000020720	rnaseh2b	100	57.143	Xenopus_tropicalis
ENSSLDG00000012485	rnaseh2b	100	84.000	ENSXCOG00000018732	rnaseh2b	100	84.000	Xiphophorus_couchianus
ENSSLDG00000012485	rnaseh2b	100	81.759	ENSXMAG00000022554	rnaseh2b	100	81.759	Xiphophorus_maculatus