EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000012565 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 12661 bases
Position: chrPEQF01099062.1:2243778-2256438
Accession: 111664182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015820	POP1	PF06978.11	1.6e-33	1	2
ENSSLDP00000015820	POP1	PF06978.11	1.6e-33	2	2
ENSSLDP00000015820	POPLD	PF08170.12	1.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016404	POP1-201	5835	XM_023418678	ENSSLDP00000015820	989 (aa)	XP_023274446	UPI000C6FB2F5

Gene Model

Click here to download ENSSLDG00000012565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012565	POP1	100	47.925	ENSG00000104356	POP1	100	46.786	Homo_sapiens
ENSSLDG00000012565	POP1	100	82.442	ENSAPOG00000008198	pop1	100	82.442	Acanthochromis_polyacanthus
ENSSLDG00000012565	POP1	100	46.774	ENSAMEG00000000556	POP1	100	46.774	Ailuropoda_melanoleuca
ENSSLDG00000012565	POP1	100	75.100	ENSACIG00000004169	POP1	100	73.674	Amphilophus_citrinellus
ENSSLDG00000012565	POP1	100	82.525	ENSAOCG00000010991	pop1	100	82.525	Amphiprion_ocellaris
ENSSLDG00000012565	POP1	100	74.152	ENSAPEG00000007607	pop1	100	74.152	Amphiprion_percula
ENSSLDG00000012565	POP1	100	82.949	ENSATEG00000024814	POP1	100	82.748	Anabas_testudineus
ENSSLDG00000012565	POP1	93	49.638	ENSAPLG00000014418	POP1	99	49.381	Anas_platyrhynchos
ENSSLDG00000012565	POP1	100	45.880	ENSACAG00000016083	POP1	100	45.037	Anolis_carolinensis
ENSSLDG00000012565	POP1	87	54.203	ENSANAG00000026360	POP1	99	54.203	Aotus_nancymaae
ENSSLDG00000012565	POP1	100	79.557	ENSACLG00000010951	pop1	100	78.931	Astatotilapia_calliptera
ENSSLDG00000012565	POP1	100	57.797	ENSAMXG00000014483	POP1	100	57.520	Astyanax_mexicanus
ENSSLDG00000012565	POP1	100	47.358	ENSBTAG00000012596	POP1	100	47.170	Bos_taurus
ENSSLDG00000012565	POP1	75	31.765	WBGene00015486	C05D11.9	83	33.803	Caenorhabditis_elegans
ENSSLDG00000012565	POP1	100	47.533	ENSCJAG00000015567	POP1	100	46.869	Callithrix_jacchus
ENSSLDG00000012565	POP1	100	48.008	ENSCAFG00000000469	POP1	100	47.911	Canis_familiaris
ENSSLDG00000012565	POP1	100	46.635	ENSCAFG00020026765	POP1	100	46.825	Canis_lupus_dingo
ENSSLDG00000012565	POP1	100	46.837	ENSCHIG00000017066	POP1	100	46.898	Capra_hircus
ENSSLDG00000012565	POP1	100	46.872	ENSTSYG00000003097	POP1	100	46.811	Carlito_syrichta
ENSSLDG00000012565	POP1	100	45.301	ENSCAPG00000007251	POP1	100	45.061	Cavia_aperea
ENSSLDG00000012565	POP1	100	46.321	ENSCPOG00000002901	POP1	100	46.081	Cavia_porcellus
ENSSLDG00000012565	POP1	100	47.859	ENSCCAG00000018939	POP1	100	46.997	Cebus_capucinus
ENSSLDG00000012565	POP1	100	47.086	ENSCATG00000040916	POP1	100	46.610	Cercocebus_atys
ENSSLDG00000012565	POP1	100	47.488	ENSCLAG00000007208	POP1	97	47.393	Chinchilla_lanigera
ENSSLDG00000012565	POP1	91	49.216	ENSCSAG00000012340	POP1	98	48.574	Chlorocebus_sabaeus
ENSSLDG00000012565	POP1	95	46.115	ENSCHOG00000011432	POP1	98	46.076	Choloepus_hoffmanni
ENSSLDG00000012565	POP1	100	48.713	ENSCPBG00000006373	POP1	100	48.667	Chrysemys_picta_bellii
ENSSLDG00000012565	POP1	82	36.842	ENSCING00000008323	-	87	36.437	Ciona_intestinalis
ENSSLDG00000012565	POP1	100	46.805	ENSCANG00000001647	POP1	100	46.704	Colobus_angolensis_palliatus
ENSSLDG00000012565	POP1	100	46.578	ENSCGRG00001017308	Pop1	100	45.845	Cricetulus_griseus_chok1gshd
ENSSLDG00000012565	POP1	100	44.121	ENSCGRG00000010824	Pop1	100	43.259	Cricetulus_griseus_crigri
ENSSLDG00000012565	POP1	100	76.714	ENSCSEG00000008737	POP1	100	76.714	Cynoglossus_semilaevis
ENSSLDG00000012565	POP1	100	73.011	ENSCVAG00000022248	pop1	100	71.785	Cyprinodon_variegatus
ENSSLDG00000012565	POP1	52	53.578	ENSDARG00000102087	pop1	98	52.998	Danio_rerio
ENSSLDG00000012565	POP1	100	44.383	ENSDNOG00000019974	POP1	100	44.475	Dasypus_novemcinctus
ENSSLDG00000012565	POP1	100	40.300	ENSDORG00000015384	Pop1	100	40.474	Dipodomys_ordii
ENSSLDG00000012565	POP1	88	46.416	ENSETEG00000007839	POP1	88	46.246	Echinops_telfairi
ENSSLDG00000012565	POP1	100	48.019	ENSEASG00005003189	POP1	98	47.398	Equus_asinus_asinus
ENSSLDG00000012565	POP1	100	47.958	ENSECAG00000024236	POP1	100	47.483	Equus_caballus
ENSSLDG00000012565	POP1	51	74.026	ENSEEUG00000003050	-	53	77.273	Erinaceus_europaeus
ENSSLDG00000012565	POP1	100	64.036	ENSELUG00000003526	pop1	100	63.636	Esox_lucius
ENSSLDG00000012565	POP1	100	47.398	ENSFCAG00000002168	POP1	100	47.398	Felis_catus
ENSSLDG00000012565	POP1	100	46.869	ENSFALG00000005711	POP1	100	46.553	Ficedula_albicollis
ENSSLDG00000012565	POP1	100	46.887	ENSFDAG00000017068	POP1	100	46.887	Fukomys_damarensis
ENSSLDG00000012565	POP1	100	73.843	ENSFHEG00000019518	pop1	100	73.843	Fundulus_heteroclitus
ENSSLDG00000012565	POP1	100	62.751	ENSGMOG00000000659	POP1	100	63.290	Gadus_morhua
ENSSLDG00000012565	POP1	100	71.818	ENSGAFG00000019770	POP1	100	71.818	Gambusia_affinis
ENSSLDG00000012565	POP1	100	69.450	ENSGACG00000003499	pop1	100	69.260	Gasterosteus_aculeatus
ENSSLDG00000012565	POP1	100	48.569	ENSGAGG00000011737	POP1	98	48.279	Gopherus_agassizii
ENSSLDG00000012565	POP1	100	47.547	ENSGGOG00000003176	POP1	100	46.692	Gorilla_gorilla
ENSSLDG00000012565	POP1	100	79.859	ENSHBUG00000021583	pop1	100	79.032	Haplochromis_burtoni
ENSSLDG00000012565	POP1	100	46.780	ENSHGLG00000006029	POP1	100	47.064	Heterocephalus_glaber_female
ENSSLDG00000012565	POP1	100	46.780	ENSHGLG00100016879	POP1	100	47.064	Heterocephalus_glaber_male
ENSSLDG00000012565	POP1	100	67.349	ENSHCOG00000013888	pop1	100	66.862	Hippocampus_comes
ENSSLDG00000012565	POP1	100	56.551	ENSIPUG00000018336	pop1	100	56.492	Ictalurus_punctatus
ENSSLDG00000012565	POP1	100	46.692	ENSSTOG00000011455	POP1	97	46.692	Ictidomys_tridecemlineatus
ENSSLDG00000012565	POP1	100	45.402	ENSJJAG00000013325	Pop1	100	45.077	Jaculus_jaculus
ENSSLDG00000012565	POP1	100	74.141	ENSKMAG00000001346	POP1	100	74.168	Kryptolebias_marmoratus
ENSSLDG00000012565	POP1	100	69.657	ENSLBEG00000024457	POP1	100	68.813	Labrus_bergylta
ENSSLDG00000012565	POP1	93	51.373	ENSLACG00000012498	POP1	98	50.859	Latimeria_chalumnae
ENSSLDG00000012565	POP1	100	55.845	ENSLOCG00000009817	POP1	100	55.814	Lepisosteus_oculatus
ENSSLDG00000012565	POP1	100	48.120	ENSLAFG00000010770	POP1	100	48.152	Loxodonta_africana
ENSSLDG00000012565	POP1	100	47.175	ENSMFAG00000000347	POP1	100	46.704	Macaca_fascicularis
ENSSLDG00000012565	POP1	100	47.319	ENSMNEG00000036870	POP1	100	46.849	Macaca_nemestrina
ENSSLDG00000012565	POP1	100	47.269	ENSMLEG00000034986	POP1	100	46.704	Mandrillus_leucophaeus
ENSSLDG00000012565	POP1	100	83.047	ENSMAMG00000004040	pop1	100	82.543	Mastacembelus_armatus
ENSSLDG00000012565	POP1	100	79.658	ENSMZEG00005025448	pop1	100	78.931	Maylandia_zebra
ENSSLDG00000012565	POP1	100	45.471	ENSMGAG00000012167	POP1	100	46.204	Meleagris_gallopavo
ENSSLDG00000012565	POP1	100	46.476	ENSMAUG00000017537	Pop1	100	46.044	Mesocricetus_auratus
ENSSLDG00000012565	POP1	100	46.435	ENSMICG00000004361	POP1	100	46.385	Microcebus_murinus
ENSSLDG00000012565	POP1	100	46.660	ENSMOCG00000006356	Pop1	100	46.381	Microtus_ochrogaster
ENSSLDG00000012565	POP1	100	70.303	ENSMMOG00000018242	pop1	100	70.606	Mola_mola
ENSSLDG00000012565	POP1	100	47.092	ENSMODG00000006561	POP1	100	47.186	Monodelphis_domestica
ENSSLDG00000012565	POP1	100	81.717	ENSMALG00000012621	POP1	100	81.717	Monopterus_albus
ENSSLDG00000012565	POP1	100	45.308	MGP_CAROLIEiJ_G0019726	Pop1	100	44.962	Mus_caroli
ENSSLDG00000012565	POP1	100	45.506	ENSMUSG00000022325	Pop1	100	45.403	Mus_musculus
ENSSLDG00000012565	POP1	100	45.385	MGP_PahariEiJ_G0019735	Pop1	100	44.995	Mus_pahari
ENSSLDG00000012565	POP1	100	45.636	MGP_SPRETEiJ_G0020622	Pop1	100	45.247	Mus_spretus
ENSSLDG00000012565	POP1	100	47.025	ENSMPUG00000015250	POP1	100	47.025	Mustela_putorius_furo
ENSSLDG00000012565	POP1	100	45.109	ENSMLUG00000010204	POP1	100	45.014	Myotis_lucifugus
ENSSLDG00000012565	POP1	100	47.053	ENSNGAG00000001582	Pop1	100	47.025	Nannospalax_galili
ENSSLDG00000012565	POP1	100	72.105	ENSNBRG00000002356	pop1	100	71.472	Neolamprologus_brichardi
ENSSLDG00000012565	POP1	100	47.925	ENSNLEG00000002541	POP1	100	47.543	Nomascus_leucogenys
ENSSLDG00000012565	POP1	88	55.398	ENSMEUG00000003118	POP1	91	55.114	Notamacropus_eugenii
ENSSLDG00000012565	POP1	100	46.190	ENSOPRG00000007667	POP1	100	46.095	Ochotona_princeps
ENSSLDG00000012565	POP1	100	46.698	ENSODEG00000003984	POP1	100	46.270	Octodon_degus
ENSSLDG00000012565	POP1	100	80.161	ENSONIG00000016445	pop1	100	79.435	Oreochromis_niloticus
ENSSLDG00000012565	POP1	60	45.941	ENSOANG00000001278	-	94	45.743	Ornithorhynchus_anatinus
ENSSLDG00000012565	POP1	100	45.806	ENSOCUG00000017400	POP1	100	45.771	Oryctolagus_cuniculus
ENSSLDG00000012565	POP1	100	72.910	ENSORLG00000002839	pop1	100	72.709	Oryzias_latipes
ENSSLDG00000012565	POP1	100	66.471	ENSORLG00020022450	POP1	100	65.882	Oryzias_latipes_hni
ENSSLDG00000012565	POP1	100	73.185	ENSORLG00015012746	POP1	100	73.185	Oryzias_latipes_hsok
ENSSLDG00000012565	POP1	100	70.636	ENSOMEG00000006915	pop1	99	70.333	Oryzias_melastigma
ENSSLDG00000012565	POP1	100	47.498	ENSOGAG00000001466	POP1	100	46.981	Otolemur_garnettii
ENSSLDG00000012565	POP1	100	47.830	ENSPPAG00000018410	POP1	100	46.975	Pan_paniscus
ENSSLDG00000012565	POP1	100	46.648	ENSPPRG00000005002	POP1	100	46.459	Panthera_pardus
ENSSLDG00000012565	POP1	100	46.742	ENSPTIG00000016527	POP1	100	46.553	Panthera_tigris_altaica
ENSSLDG00000012565	POP1	100	47.547	ENSPTRG00000020458	POP1	100	47.259	Pan_troglodytes
ENSSLDG00000012565	POP1	100	47.363	ENSPANG00000009704	POP1	100	46.798	Papio_anubis
ENSSLDG00000012565	POP1	100	59.310	ENSPKIG00000016325	POP1	100	59.127	Paramormyrops_kingsleyae
ENSSLDG00000012565	POP1	100	48.053	ENSPSIG00000012343	POP1	100	47.736	Pelodiscus_sinensis
ENSSLDG00000012565	POP1	100	62.967	ENSPMGG00000022253	POP1	100	62.488	Periophthalmus_magnuspinnatus
ENSSLDG00000012565	POP1	99	45.744	ENSPEMG00000023633	Pop1	100	45.532	Peromyscus_maniculatus_bairdii
ENSSLDG00000012565	POP1	91	42.531	ENSPMAG00000003209	POP1	99	42.618	Petromyzon_marinus
ENSSLDG00000012565	POP1	100	46.654	ENSPCIG00000012216	POP1	100	46.328	Phascolarctos_cinereus
ENSSLDG00000012565	POP1	100	71.400	ENSPFOG00000012490	POP1	100	71.400	Poecilia_formosa
ENSSLDG00000012565	POP1	100	70.997	ENSPLAG00000004646	POP1	100	70.997	Poecilia_latipinna
ENSSLDG00000012565	POP1	100	71.529	ENSPMEG00000019592	POP1	100	71.328	Poecilia_mexicana
ENSSLDG00000012565	POP1	100	71.759	ENSPREG00000020951	POP1	100	71.759	Poecilia_reticulata
ENSSLDG00000012565	POP1	100	47.269	ENSPPYG00000018777	POP1	100	46.887	Pongo_abelii
ENSSLDG00000012565	POP1	100	44.948	ENSPCAG00000016662	POP1	100	44.854	Procavia_capensis
ENSSLDG00000012565	POP1	100	46.573	ENSPCOG00000019420	POP1	100	46.429	Propithecus_coquereli
ENSSLDG00000012565	POP1	100	46.212	ENSPVAG00000014468	POP1	100	46.117	Pteropus_vampyrus
ENSSLDG00000012565	POP1	100	73.434	ENSPNYG00000004476	pop1	100	72.020	Pundamilia_nyererei
ENSSLDG00000012565	POP1	100	57.946	ENSPNAG00000000265	pop1	100	57.599	Pygocentrus_nattereri
ENSSLDG00000012565	POP1	100	44.739	ENSRNOG00000005243	Pop1	100	44.381	Rattus_norvegicus
ENSSLDG00000012565	POP1	100	47.086	ENSRBIG00000007996	POP1	100	46.610	Rhinopithecus_bieti
ENSSLDG00000012565	POP1	100	46.992	ENSRROG00000012334	POP1	100	46.704	Rhinopithecus_roxellana
ENSSLDG00000012565	POP1	99	47.009	ENSSBOG00000020830	POP1	100	46.622	Saimiri_boliviensis_boliviensis
ENSSLDG00000012565	POP1	100	47.842	ENSSHAG00000000296	POP1	100	47.131	Sarcophilus_harrisii
ENSSLDG00000012565	POP1	100	59.880	ENSSFOG00015007429	pop1	99	59.681	Scleropages_formosus
ENSSLDG00000012565	POP1	100	76.643	ENSSMAG00000010467	POP1	100	77.195	Scophthalmus_maximus
ENSSLDG00000012565	POP1	100	98.079	ENSSDUG00000007817	POP1	100	98.079	Seriola_dumerili
ENSSLDG00000012565	POP1	100	46.388	ENSSPUG00000003550	-	100	46.023	Sphenodon_punctatus
ENSSLDG00000012565	POP1	100	75.075	ENSSPAG00000014955	pop1	100	74.078	Stegastes_partitus
ENSSLDG00000012565	POP1	100	48.084	ENSSSCG00000006078	POP1	100	48.084	Sus_scrofa
ENSSLDG00000012565	POP1	93	44.343	ENSTGUG00000012011	-	100	44.626	Taeniopygia_guttata
ENSSLDG00000012565	POP1	100	69.076	ENSTRUG00000010856	pop1	100	68.373	Takifugu_rubripes
ENSSLDG00000012565	POP1	95	71.136	ENSTNIG00000013297	pop1	100	70.010	Tetraodon_nigroviridis
ENSSLDG00000012565	POP1	95	45.758	ENSTBEG00000014214	POP1	98	45.272	Tupaia_belangeri
ENSSLDG00000012565	POP1	100	46.509	ENSTTRG00000016071	POP1	100	46.415	Tursiops_truncatus
ENSSLDG00000012565	POP1	99	47.317	ENSUAMG00000017309	POP1	100	47.610	Ursus_americanus
ENSSLDG00000012565	POP1	100	46.132	ENSUMAG00000016952	POP1	100	51.128	Ursus_maritimus
ENSSLDG00000012565	POP1	86	51.418	ENSVPAG00000008278	POP1	82	50.709	Vicugna_pacos
ENSSLDG00000012565	POP1	100	46.686	ENSVVUG00000010994	POP1	100	46.686	Vulpes_vulpes
ENSSLDG00000012565	POP1	100	62.537	ENSXCOG00000017043	POP1	100	62.340	Xiphophorus_couchianus
ENSSLDG00000012565	POP1	100	70.825	ENSXMAG00000002472	POP1	100	70.825	Xiphophorus_maculatus