EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000012659 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 17777 bases
Position: chrPEQF01099363.1:1180683-1198459
Accession: 111671751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000015962	Surp	PF01805.20	1.3e-16	1	1
ENSSLDP00000015942	Surp	PF01805.20	1.3e-16	1	1
ENSSLDP00000015962	G-patch	PF01585.23	1.6e-10	1	1
ENSSLDP00000015942	G-patch	PF01585.23	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016533	-	3958	XM_023428941	ENSSLDP00000015942	933 (aa)	XP_023284709	UPI000C6F7A82
ENSSLDT00000016555	-	3919	XM_023428942	ENSSLDP00000015962	920 (aa)	XP_023284710	UPI000C6F8C06

Gene Model

Click here to download ENSSLDG00000012659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012659	cherp	79	68.553	ENSG00000085872	CHERP	99	67.773	Homo_sapiens
ENSSLDG00000012659	cherp	61	90.698	ENSAPOG00000009646	cherp	99	90.340	Acanthochromis_polyacanthus
ENSSLDG00000012659	cherp	78	69.891	ENSAMEG00000010048	CHERP	99	66.921	Ailuropoda_melanoleuca
ENSSLDG00000012659	cherp	79	90.108	ENSACIG00000019242	cherp	80	90.515	Amphilophus_citrinellus
ENSSLDG00000012659	cherp	100	91.970	ENSAOCG00000017846	cherp	100	91.970	Amphiprion_ocellaris
ENSSLDG00000012659	cherp	100	92.069	ENSAPEG00000021128	cherp	100	92.176	Amphiprion_percula
ENSSLDG00000012659	cherp	100	90.919	ENSATEG00000006341	cherp	99	90.705	Anabas_testudineus
ENSSLDG00000012659	cherp	76	67.872	ENSAPLG00000010773	CHERP	99	65.044	Anas_platyrhynchos
ENSSLDG00000012659	cherp	51	69.043	ENSACAG00000011583	CHERP	99	68.050	Anolis_carolinensis
ENSSLDG00000012659	cherp	79	67.704	ENSANAG00000024284	CHERP	99	67.090	Aotus_nancymaae
ENSSLDG00000012659	cherp	100	92.283	ENSACLG00000020053	cherp	100	92.176	Astatotilapia_calliptera
ENSSLDG00000012659	cherp	100	72.046	ENSAMXG00000021637	cherp	94	72.152	Astyanax_mexicanus
ENSSLDG00000012659	cherp	99	66.702	ENSBTAG00000005289	CHERP	82	69.559	Bos_taurus
ENSSLDG00000012659	cherp	79	67.704	ENSCJAG00000040462	CHERP	99	67.090	Callithrix_jacchus
ENSSLDG00000012659	cherp	79	70.588	ENSCAFG00000015671	CHERP	99	68.060	Canis_familiaris
ENSSLDG00000012659	cherp	85	87.500	ENSCAFG00020009941	CHERP	91	75.701	Canis_lupus_dingo
ENSSLDG00000012659	cherp	85	88.750	ENSCHIG00000013765	CHERP	94	88.750	Capra_hircus
ENSSLDG00000012659	cherp	89	62.766	ENSCAPG00000000910	CHERP	68	70.031	Cavia_aperea
ENSSLDG00000012659	cherp	79	69.007	ENSCPOG00000019949	CHERP	99	68.047	Cavia_porcellus
ENSSLDG00000012659	cherp	79	67.834	ENSCCAG00000031534	CHERP	99	67.196	Cebus_capucinus
ENSSLDG00000012659	cherp	79	67.617	ENSCATG00000031409	CHERP	99	66.949	Cercocebus_atys
ENSSLDG00000012659	cherp	68	69.207	ENSCLAG00000005484	CHERP	73	67.718	Chinchilla_lanigera
ENSSLDG00000012659	cherp	79	68.816	ENSCSAG00000005740	CHERP	99	67.880	Chlorocebus_sabaeus
ENSSLDG00000012659	cherp	99	65.882	ENSCPBG00000014970	CHERP	100	65.801	Chrysemys_picta_bellii
ENSSLDG00000012659	cherp	69	54.064	ENSCING00000004814	-	53	76.923	Ciona_intestinalis
ENSSLDG00000012659	cherp	59	45.178	ENSCSAVG00000002455	-	50	77.778	Ciona_savignyi
ENSSLDG00000012659	cherp	79	69.079	ENSCANG00000032053	CHERP	99	67.773	Colobus_angolensis_palliatus
ENSSLDG00000012659	cherp	79	67.825	ENSCGRG00001023316	Cherp	99	67.403	Cricetulus_griseus_chok1gshd
ENSSLDG00000012659	cherp	79	69.393	ENSCGRG00000015901	Cherp	99	68.274	Cricetulus_griseus_crigri
ENSSLDG00000012659	cherp	80	85.619	ENSCSEG00000019700	cherp	100	85.169	Cynoglossus_semilaevis
ENSSLDG00000012659	cherp	76	83.644	ENSCVAG00000003622	cherp	93	83.357	Cyprinodon_variegatus
ENSSLDG00000012659	cherp	100	72.354	ENSDARG00000021812	cherp	100	78.988	Danio_rerio
ENSSLDG00000012659	cherp	98	64.827	ENSDORG00000027623	Cherp	100	65.458	Dipodomys_ordii
ENSSLDG00000012659	cherp	63	62.500	FBgn0261872	scaf6	54	62.500	Drosophila_melanogaster
ENSSLDG00000012659	cherp	83	76.786	ENSETEG00000019543	CHERP	83	75.893	Echinops_telfairi
ENSSLDG00000012659	cherp	79	70.588	ENSEASG00005000428	CHERP	92	67.953	Equus_asinus_asinus
ENSSLDG00000012659	cherp	79	69.393	ENSECAG00000012713	CHERP	99	68.094	Equus_caballus
ENSSLDG00000012659	cherp	99	76.196	ENSELUG00000023026	cherp	98	76.201	Esox_lucius
ENSSLDG00000012659	cherp	79	68.223	ENSFCAG00000013172	CHERP	99	67.548	Felis_catus
ENSSLDG00000012659	cherp	79	69.664	ENSFALG00000013410	CHERP	86	66.199	Ficedula_albicollis
ENSSLDG00000012659	cherp	92	100.000	ENSFHEG00000009720	cherp	77	100.000	Fundulus_heteroclitus
ENSSLDG00000012659	cherp	98	80.978	ENSGMOG00000008654	cherp	99	81.196	Gadus_morhua
ENSSLDG00000012659	cherp	79	69.054	ENSGALG00000003824	CHERP	88	66.054	Gallus_gallus
ENSSLDG00000012659	cherp	99	85.592	ENSGACG00000002053	cherp	99	84.845	Gasterosteus_aculeatus
ENSSLDG00000012659	cherp	99	65.775	ENSGAGG00000014208	CHERP	100	65.693	Gopherus_agassizii
ENSSLDG00000012659	cherp	100	92.069	ENSHBUG00000007405	cherp	100	91.961	Haplochromis_burtoni
ENSSLDG00000012659	cherp	79	70.093	ENSHGLG00000002993	CHERP	99	67.811	Heterocephalus_glaber_female
ENSSLDG00000012659	cherp	79	80.518	ENSHCOG00000007691	cherp	100	78.881	Hippocampus_comes
ENSSLDG00000012659	cherp	100	72.562	ENSIPUG00000025008	cherp	100	72.210	Ictalurus_punctatus
ENSSLDG00000012659	cherp	78	70.596	ENSSTOG00000012089	CHERP	99	68.113	Ictidomys_tridecemlineatus
ENSSLDG00000012659	cherp	99	65.455	ENSJJAG00000017982	Cherp	81	68.470	Jaculus_jaculus
ENSSLDG00000012659	cherp	100	87.121	ENSKMAG00000009101	cherp	100	87.121	Kryptolebias_marmoratus
ENSSLDG00000012659	cherp	78	88.472	ENSLBEG00000007586	cherp	91	88.889	Labrus_bergylta
ENSSLDG00000012659	cherp	79	69.401	ENSLACG00000018221	CHERP	100	66.183	Latimeria_chalumnae
ENSSLDG00000012659	cherp	99	74.576	ENSLOCG00000003654	cherp	99	71.908	Lepisosteus_oculatus
ENSSLDG00000012659	cherp	79	68.833	ENSLAFG00000009096	CHERP	100	68.797	Loxodonta_africana
ENSSLDG00000012659	cherp	79	67.704	ENSMFAG00000033267	CHERP	99	66.843	Macaca_fascicularis
ENSSLDG00000012659	cherp	99	65.397	ENSMMUG00000012958	CHERP	82	68.158	Macaca_mulatta
ENSSLDG00000012659	cherp	79	67.704	ENSMNEG00000004125	CHERP	99	66.843	Macaca_nemestrina
ENSSLDG00000012659	cherp	69	84.768	ENSMLEG00000044337	CHERP	99	72.171	Mandrillus_leucophaeus
ENSSLDG00000012659	cherp	100	90.347	ENSMAMG00000022269	cherp	100	90.695	Mastacembelus_armatus
ENSSLDG00000012659	cherp	100	92.283	ENSMZEG00005018014	cherp	100	92.176	Maylandia_zebra
ENSSLDG00000012659	cherp	68	70.031	ENSMGAG00000005571	CHERP	93	65.821	Meleagris_gallopavo
ENSSLDG00000012659	cherp	79	67.613	ENSMAUG00000015856	Cherp	99	67.334	Mesocricetus_auratus
ENSSLDG00000012659	cherp	79	69.396	ENSMICG00000004577	CHERP	100	67.197	Microcebus_murinus
ENSSLDG00000012659	cherp	79	70.385	ENSMOCG00000014697	Cherp	99	68.196	Microtus_ochrogaster
ENSSLDG00000012659	cherp	99	87.473	ENSMMOG00000008525	cherp	97	86.928	Mola_mola
ENSSLDG00000012659	cherp	79	67.188	ENSMODG00000014938	CHERP	100	67.120	Monodelphis_domestica
ENSSLDG00000012659	cherp	100	90.909	ENSMALG00000020688	cherp	100	91.337	Monopterus_albus
ENSSLDG00000012659	cherp	79	69.474	MGP_CAROLIEiJ_G0031220	Cherp	99	67.797	Mus_caroli
ENSSLDG00000012659	cherp	79	68.331	ENSMUSG00000052488	Cherp	99	66.948	Mus_musculus
ENSSLDG00000012659	cherp	79	69.282	MGP_PahariEiJ_G0021685	Cherp	99	67.732	Mus_pahari
ENSSLDG00000012659	cherp	79	69.525	MGP_SPRETEiJ_G0032341	Cherp	99	67.834	Mus_spretus
ENSSLDG00000012659	cherp	79	70.227	ENSMPUG00000016023	CHERP	77	69.733	Mustela_putorius_furo
ENSSLDG00000012659	cherp	79	64.474	ENSMLUG00000013881	CHERP	99	62.460	Myotis_lucifugus
ENSSLDG00000012659	cherp	79	67.839	ENSNGAG00000023323	Cherp	99	68.244	Nannospalax_galili
ENSSLDG00000012659	cherp	100	85.408	ENSNBRG00000001914	cherp	81	89.266	Neolamprologus_brichardi
ENSSLDG00000012659	cherp	99	62.618	ENSNLEG00000005536	CHERP	99	67.987	Nomascus_leucogenys
ENSSLDG00000012659	cherp	70	78.425	ENSMEUG00000010840	CHERP	91	78.425	Notamacropus_eugenii
ENSSLDG00000012659	cherp	78	70.135	ENSODEG00000001528	CHERP	81	68.182	Octodon_degus
ENSSLDG00000012659	cherp	100	91.961	ENSONIG00000007686	cherp	100	91.854	Oreochromis_niloticus
ENSSLDG00000012659	cherp	100	84.154	ENSORLG00000000138	cherp	100	83.170	Oryzias_latipes
ENSSLDG00000012659	cherp	100	84.365	ENSORLG00020013142	cherp	100	82.953	Oryzias_latipes_hni
ENSSLDG00000012659	cherp	100	83.170	ENSORLG00015008911	cherp	100	82.845	Oryzias_latipes_hsok
ENSSLDG00000012659	cherp	99	82.562	ENSOMEG00000016947	cherp	99	83.843	Oryzias_melastigma
ENSSLDG00000012659	cherp	79	68.026	ENSOGAG00000005834	CHERP	79	68.048	Otolemur_garnettii
ENSSLDG00000012659	cherp	79	62.087	ENSOARG00000018876	CHERP	78	61.847	Ovis_aries
ENSSLDG00000012659	cherp	79	67.358	ENSPPAG00000029195	CHERP	99	66.843	Pan_paniscus
ENSSLDG00000012659	cherp	79	68.223	ENSPPRG00000003275	CHERP	99	67.548	Panthera_pardus
ENSSLDG00000012659	cherp	79	68.463	ENSPTRG00000010647	CHERP	99	67.880	Pan_troglodytes
ENSSLDG00000012659	cherp	79	67.704	ENSPANG00000011698	CHERP	99	66.843	Papio_anubis
ENSSLDG00000012659	cherp	77	67.083	ENSPKIG00000000423	cherp	96	63.991	Paramormyrops_kingsleyae
ENSSLDG00000012659	cherp	98	67.206	ENSPSIG00000011974	CHERP	100	64.838	Pelodiscus_sinensis
ENSSLDG00000012659	cherp	98	70.570	ENSPMGG00000023606	cherp	79	76.381	Periophthalmus_magnuspinnatus
ENSSLDG00000012659	cherp	79	67.522	ENSPEMG00000011238	Cherp	99	67.225	Peromyscus_maniculatus_bairdii
ENSSLDG00000012659	cherp	79	69.816	ENSPCIG00000019615	CHERP	95	67.579	Phascolarctos_cinereus
ENSSLDG00000012659	cherp	99	85.120	ENSPFOG00000016899	cherp	99	84.902	Poecilia_formosa
ENSSLDG00000012659	cherp	86	82.763	ENSPMEG00000002214	cherp	76	86.341	Poecilia_mexicana
ENSSLDG00000012659	cherp	99	85.323	ENSPREG00000020774	cherp	99	85.104	Poecilia_reticulata
ENSSLDG00000012659	cherp	79	68.059	ENSPPYG00000009691	CHERP	99	66.164	Pongo_abelii
ENSSLDG00000012659	cherp	87	87.500	ENSPCAG00000001337	CHERP	89	87.500	Procavia_capensis
ENSSLDG00000012659	cherp	88	87.500	ENSPVAG00000004320	CHERP	89	87.500	Pteropus_vampyrus
ENSSLDG00000012659	cherp	100	92.069	ENSPNYG00000003942	cherp	100	91.961	Pundamilia_nyererei
ENSSLDG00000012659	cherp	80	75.484	ENSPNAG00000017179	cherp	100	72.421	Pygocentrus_nattereri
ENSSLDG00000012659	cherp	79	69.211	ENSRNOG00000012323	Cherp	99	67.585	Rattus_norvegicus
ENSSLDG00000012659	cherp	79	69.867	ENSRBIG00000038621	CHERP	99	67.704	Rhinopithecus_bieti
ENSSLDG00000012659	cherp	79	67.704	ENSRROG00000040770	CHERP	99	66.843	Rhinopithecus_roxellana
ENSSLDG00000012659	cherp	79	67.617	ENSSBOG00000014492	CHERP	99	67.196	Saimiri_boliviensis_boliviensis
ENSSLDG00000012659	cherp	78	69.657	ENSSHAG00000010752	CHERP	99	66.775	Sarcophilus_harrisii
ENSSLDG00000012659	cherp	65	83.544	ENSSFOG00015008022	cherp	84	78.947	Scleropages_formosus
ENSSLDG00000012659	cherp	100	88.723	ENSSMAG00000005362	cherp	100	89.149	Scophthalmus_maximus
ENSSLDG00000012659	cherp	100	98.725	ENSSDUG00000019712	cherp	100	98.725	Seriola_dumerili
ENSSLDG00000012659	cherp	99	67.389	ENSSPUG00000008901	CHERP	99	66.414	Sphenodon_punctatus
ENSSLDG00000012659	cherp	100	93.140	ENSSPAG00000010681	cherp	100	93.140	Stegastes_partitus
ENSSLDG00000012659	cherp	79	69.525	ENSSSCG00000013860	CHERP	99	68.449	Sus_scrofa
ENSSLDG00000012659	cherp	79	69.220	ENSTGUG00000000680	CHERP	99	66.559	Taeniopygia_guttata
ENSSLDG00000012659	cherp	100	79.831	ENSTRUG00000007429	cherp	100	81.098	Takifugu_rubripes
ENSSLDG00000012659	cherp	99	80.022	ENSTNIG00000003363	cherp	99	81.888	Tetraodon_nigroviridis
ENSSLDG00000012659	cherp	68	69.531	ENSTTRG00000015006	CHERP	89	69.531	Tursiops_truncatus
ENSSLDG00000012659	cherp	99	63.987	ENSUAMG00000017295	CHERP	80	67.857	Ursus_americanus
ENSSLDG00000012659	cherp	79	67.529	ENSVVUG00000016546	CHERP	99	66.948	Vulpes_vulpes