EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012714 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 14671 bases
Position: chrPEQF01099363.1:1208756-1223426
Accession: 111671787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000016060	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016655	-	2661	XM_023428986	ENSSLDP00000016060	886 (aa)	XP_023284754	-

Gene Model

Click here to download ENSSLDG00000012714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012714	chd1l	50	31.898	ENSSLDG00000013787	rad54b	57	31.707
ENSSLDG00000012714	chd1l	60	41.835	ENSSLDG00000025190	smarca5	53	41.651
ENSSLDG00000012714	chd1l	54	43.984	ENSSLDG00000017244	chd1	52	43.346
ENSSLDG00000012714	chd1l	58	31.018	ENSSLDG00000018663	ercc6l2	52	31.478
ENSSLDG00000012714	chd1l	52	36.071	ENSSLDG00000018960	hells	68	35.714
ENSSLDG00000012714	chd1l	50	32.136	ENSSLDG00000012330	rad54l	71	32.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012714	chd1l	95	63.732	ENSG00000131778	CHD1L	98	64.927	Homo_sapiens
ENSSLDG00000012714	chd1l	95	87.324	ENSAPOG00000001539	chd1l	97	87.324	Acanthochromis_polyacanthus
ENSSLDG00000012714	chd1l	95	65.023	ENSAMEG00000017063	CHD1L	94	65.023	Ailuropoda_melanoleuca
ENSSLDG00000012714	chd1l	95	83.021	ENSACIG00000001164	chd1l	97	83.255	Amphilophus_citrinellus
ENSSLDG00000012714	chd1l	94	87.544	ENSAOCG00000014510	chd1l	83	87.544	Amphiprion_ocellaris
ENSSLDG00000012714	chd1l	95	82.904	ENSAPEG00000017573	chd1l	93	83.372	Amphiprion_percula
ENSSLDG00000012714	chd1l	94	83.729	ENSAPEG00000017450	chd1l	92	83.729	Amphiprion_percula
ENSSLDG00000012714	chd1l	94	88.284	ENSATEG00000013058	chd1l	91	87.264	Anabas_testudineus
ENSSLDG00000012714	chd1l	95	62.383	ENSAPLG00000009976	CHD1L	94	62.383	Anas_platyrhynchos
ENSSLDG00000012714	chd1l	95	60.731	ENSACAG00000017686	CHD1L	97	60.203	Anolis_carolinensis
ENSSLDG00000012714	chd1l	95	63.423	ENSANAG00000024347	CHD1L	95	63.182	Aotus_nancymaae
ENSSLDG00000012714	chd1l	95	83.765	ENSACLG00000019304	chd1l	94	81.925	Astatotilapia_calliptera
ENSSLDG00000012714	chd1l	95	65.533	ENSAMXG00000012367	chd1l	85	65.457	Astyanax_mexicanus
ENSSLDG00000012714	chd1l	95	64.713	ENSBTAG00000020831	CHD1L	96	63.647	Bos_taurus
ENSSLDG00000012714	chd1l	95	63.658	ENSCJAG00000002406	CHD1L	95	63.415	Callithrix_jacchus
ENSSLDG00000012714	chd1l	96	61.645	ENSCAFG00000010944	CHD1L	95	61.645	Canis_familiaris
ENSSLDG00000012714	chd1l	96	63.395	ENSCAFG00020020121	CHD1L	95	64.573	Canis_lupus_dingo
ENSSLDG00000012714	chd1l	95	64.830	ENSCHIG00000013871	CHD1L	95	65.207	Capra_hircus
ENSSLDG00000012714	chd1l	94	64.057	ENSTSYG00000003005	CHD1L	99	63.647	Carlito_syrichta
ENSSLDG00000012714	chd1l	94	63.282	ENSCPOG00000009000	CHD1L	95	63.011	Cavia_porcellus
ENSSLDG00000012714	chd1l	95	61.196	ENSCCAG00000036079	CHD1L	95	60.976	Cebus_capucinus
ENSSLDG00000012714	chd1l	95	63.658	ENSCATG00000031044	CHD1L	95	63.415	Cercocebus_atys
ENSSLDG00000012714	chd1l	95	64.235	ENSCLAG00000000880	CHD1L	96	63.879	Chinchilla_lanigera
ENSSLDG00000012714	chd1l	95	63.775	ENSCSAG00000018386	CHD1L	95	63.731	Chlorocebus_sabaeus
ENSSLDG00000012714	chd1l	94	64.623	ENSCPBG00000002600	CHD1L	97	63.333	Chrysemys_picta_bellii
ENSSLDG00000012714	chd1l	94	63.830	ENSCANG00000020239	CHD1L	94	63.583	Colobus_angolensis_palliatus
ENSSLDG00000012714	chd1l	94	64.976	ENSCGRG00001021624	Chd1l	95	64.976	Cricetulus_griseus_chok1gshd
ENSSLDG00000012714	chd1l	93	65.348	ENSCGRG00000007554	Chd1l	98	65.348	Cricetulus_griseus_crigri
ENSSLDG00000012714	chd1l	95	81.434	ENSCVAG00000002595	chd1l	89	81.904	Cyprinodon_variegatus
ENSSLDG00000012714	chd1l	95	74.706	ENSDARG00000015471	chd1l	84	73.341	Danio_rerio
ENSSLDG00000012714	chd1l	95	64.444	ENSDNOG00000019504	CHD1L	95	63.879	Dasypus_novemcinctus
ENSSLDG00000012714	chd1l	96	62.874	ENSDORG00000013555	Chd1l	96	63.048	Dipodomys_ordii
ENSSLDG00000012714	chd1l	86	61.023	ENSETEG00000008445	CHD1L	85	61.023	Echinops_telfairi
ENSSLDG00000012714	chd1l	64	76.087	ENSEBUG00000005791	chd1l	75	76.087	Eptatretus_burgeri
ENSSLDG00000012714	chd1l	95	64.444	ENSEASG00005007364	CHD1L	99	64.520	Equus_asinus_asinus
ENSSLDG00000012714	chd1l	95	64.327	ENSECAG00000008915	CHD1L	99	64.399	Equus_caballus
ENSSLDG00000012714	chd1l	95	64.193	ENSELUG00000016844	chd1l	82	64.075	Esox_lucius
ENSSLDG00000012714	chd1l	95	64.630	ENSFCAG00000007777	CHD1L	95	64.037	Felis_catus
ENSSLDG00000012714	chd1l	94	62.028	ENSFALG00000006087	CHD1L	93	62.382	Ficedula_albicollis
ENSSLDG00000012714	chd1l	94	63.863	ENSFDAG00000012431	CHD1L	98	63.863	Fukomys_damarensis
ENSSLDG00000012714	chd1l	95	82.409	ENSFHEG00000012420	chd1l	84	82.645	Fundulus_heteroclitus
ENSSLDG00000012714	chd1l	97	61.680	ENSGALG00000015038	CHD1L	96	61.194	Gallus_gallus
ENSSLDG00000012714	chd1l	95	81.733	ENSGAFG00000018198	chd1l	98	76.709	Gambusia_affinis
ENSSLDG00000012714	chd1l	57	83.689	ENSGACG00000014042	chd1l	98	83.689	Gasterosteus_aculeatus
ENSSLDG00000012714	chd1l	95	64.512	ENSGAGG00000014432	CHD1L	96	64.512	Gopherus_agassizii
ENSSLDG00000012714	chd1l	94	63.669	ENSGGOG00000001067	CHD1L	94	63.498	Gorilla_gorilla
ENSSLDG00000012714	chd1l	95	83.882	ENSHBUG00000007464	chd1l	98	81.193	Haplochromis_burtoni
ENSSLDG00000012714	chd1l	95	63.337	ENSHGLG00000008933	CHD1L	95	63.220	Heterocephalus_glaber_female
ENSSLDG00000012714	chd1l	93	63.158	ENSHGLG00100007155	CHD1L	97	63.278	Heterocephalus_glaber_male
ENSSLDG00000012714	chd1l	93	79.426	ENSHCOG00000012787	chd1l	91	79.426	Hippocampus_comes
ENSSLDG00000012714	chd1l	95	68.581	ENSIPUG00000022617	chd1l	83	68.933	Ictalurus_punctatus
ENSSLDG00000012714	chd1l	96	58.995	ENSSTOG00000007032	CHD1L	96	58.995	Ictidomys_tridecemlineatus
ENSSLDG00000012714	chd1l	95	82.665	ENSKMAG00000014358	chd1l	83	82.665	Kryptolebias_marmoratus
ENSSLDG00000012714	chd1l	95	84.056	ENSLBEG00000023845	chd1l	96	84.364	Labrus_bergylta
ENSSLDG00000012714	chd1l	94	59.837	ENSLACG00000006262	CHD1L	84	60.303	Latimeria_chalumnae
ENSSLDG00000012714	chd1l	94	73.460	ENSLOCG00000010574	chd1l	84	73.460	Lepisosteus_oculatus
ENSSLDG00000012714	chd1l	95	63.837	ENSLAFG00000018136	CHD1L	99	63.700	Loxodonta_africana
ENSSLDG00000012714	chd1l	95	63.690	ENSMFAG00000043562	CHD1L	99	63.791	Macaca_fascicularis
ENSSLDG00000012714	chd1l	95	63.775	ENSMMUG00000009024	CHD1L	95	63.531	Macaca_mulatta
ENSSLDG00000012714	chd1l	95	63.775	ENSMNEG00000039905	CHD1L	95	63.531	Macaca_nemestrina
ENSSLDG00000012714	chd1l	95	63.775	ENSMLEG00000030900	CHD1L	95	63.531	Mandrillus_leucophaeus
ENSSLDG00000012714	chd1l	94	87.367	ENSMAMG00000012822	chd1l	97	85.242	Mastacembelus_armatus
ENSSLDG00000012714	chd1l	95	83.882	ENSMZEG00005020830	chd1l	85	83.882	Maylandia_zebra
ENSSLDG00000012714	chd1l	95	62.266	ENSMGAG00000014304	CHD1L	99	62.266	Meleagris_gallopavo
ENSSLDG00000012714	chd1l	95	64.671	ENSMICG00000002497	CHD1L	95	64.460	Microcebus_murinus
ENSSLDG00000012714	chd1l	96	64.277	ENSMOCG00000006305	Chd1l	96	64.277	Microtus_ochrogaster
ENSSLDG00000012714	chd1l	96	76.234	ENSMMOG00000005964	chd1l	91	76.119	Mola_mola
ENSSLDG00000012714	chd1l	94	63.647	ENSMODG00000018717	CHD1L	95	63.423	Monodelphis_domestica
ENSSLDG00000012714	chd1l	94	88.047	ENSMALG00000014675	chd1l	83	88.521	Monopterus_albus
ENSSLDG00000012714	chd1l	96	63.953	MGP_CAROLIEiJ_G0025401	Chd1l	96	63.953	Mus_caroli
ENSSLDG00000012714	chd1l	95	63.879	ENSMUSG00000028089	Chd1l	96	63.668	Mus_musculus
ENSSLDG00000012714	chd1l	95	64.361	MGP_PahariEiJ_G0026845	Chd1l	95	64.361	Mus_pahari
ENSSLDG00000012714	chd1l	95	64.052	MGP_SPRETEiJ_G0026347	Chd1l	96	63.837	Mus_spretus
ENSSLDG00000012714	chd1l	96	64.344	ENSMPUG00000000615	CHD1L	95	64.344	Mustela_putorius_furo
ENSSLDG00000012714	chd1l	95	64.028	ENSMLUG00000007573	CHD1L	96	62.302	Myotis_lucifugus
ENSSLDG00000012714	chd1l	95	60.210	ENSNGAG00000000908	Chd1l	97	60.186	Nannospalax_galili
ENSSLDG00000012714	chd1l	96	79.469	ENSNBRG00000006021	chd1l	94	79.038	Neolamprologus_brichardi
ENSSLDG00000012714	chd1l	95	62.954	ENSNLEG00000000179	CHD1L	95	62.369	Nomascus_leucogenys
ENSSLDG00000012714	chd1l	95	54.162	ENSOPRG00000006973	CHD1L	92	63.333	Ochotona_princeps
ENSSLDG00000012714	chd1l	95	60.164	ENSODEG00000002494	CHD1L	96	60.023	Octodon_degus
ENSSLDG00000012714	chd1l	95	84.588	ENSONIG00000003183	chd1l	86	84.706	Oreochromis_niloticus
ENSSLDG00000012714	chd1l	86	60.641	ENSOANG00000003068	CHD1L	93	60.641	Ornithorhynchus_anatinus
ENSSLDG00000012714	chd1l	95	60.091	ENSOCUG00000009336	CHD1L	95	60.161	Oryctolagus_cuniculus
ENSSLDG00000012714	chd1l	97	77.215	ENSORLG00000003673	chd1l	95	76.870	Oryzias_latipes
ENSSLDG00000012714	chd1l	95	80.164	ENSORLG00020005123	chd1l	92	77.370	Oryzias_latipes_hni
ENSSLDG00000012714	chd1l	95	79.719	ENSORLG00015001680	chd1l	96	78.580	Oryzias_latipes_hsok
ENSSLDG00000012714	chd1l	72	81.905	ENSOMEG00000006109	chd1l	76	81.905	Oryzias_melastigma
ENSSLDG00000012714	chd1l	96	62.937	ENSOGAG00000008775	CHD1L	95	63.170	Otolemur_garnettii
ENSSLDG00000012714	chd1l	95	64.478	ENSOARG00000020547	CHD1L	98	65.089	Ovis_aries
ENSSLDG00000012714	chd1l	96	62.920	ENSPPAG00000039193	CHD1L	99	63.382	Pan_paniscus
ENSSLDG00000012714	chd1l	94	64.976	ENSPPRG00000010258	CHD1L	93	64.976	Panthera_pardus
ENSSLDG00000012714	chd1l	96	63.036	ENSPTRG00000001220	CHD1L	95	63.256	Pan_troglodytes
ENSSLDG00000012714	chd1l	97	62.316	ENSPANG00000009170	CHD1L	95	63.531	Papio_anubis
ENSSLDG00000012714	chd1l	95	72.203	ENSPKIG00000022166	chd1l	94	71.199	Paramormyrops_kingsleyae
ENSSLDG00000012714	chd1l	98	62.626	ENSPSIG00000012595	CHD1L	98	61.521	Pelodiscus_sinensis
ENSSLDG00000012714	chd1l	96	63.889	ENSPEMG00000013528	Chd1l	96	63.741	Peromyscus_maniculatus_bairdii
ENSSLDG00000012714	chd1l	90	64.400	ENSPCIG00000030409	CHD1L	97	64.400	Phascolarctos_cinereus
ENSSLDG00000012714	chd1l	95	80.657	ENSPFOG00000015948	chd1l	83	79.535	Poecilia_formosa
ENSSLDG00000012714	chd1l	95	81.520	ENSPLAG00000015145	chd1l	95	81.148	Poecilia_latipinna
ENSSLDG00000012714	chd1l	95	80.683	ENSPMEG00000008720	chd1l	89	81.037	Poecilia_mexicana
ENSSLDG00000012714	chd1l	95	81.250	ENSPREG00000017885	chd1l	96	80.992	Poecilia_reticulata
ENSSLDG00000012714	chd1l	95	63.540	ENSPPYG00000000946	CHD1L	95	63.298	Pongo_abelii
ENSSLDG00000012714	chd1l	90	58.882	ENSPCAG00000005959	CHD1L	89	59.085	Procavia_capensis
ENSSLDG00000012714	chd1l	93	59.880	ENSPVAG00000006084	CHD1L	98	59.760	Pteropus_vampyrus
ENSSLDG00000012714	chd1l	97	81.473	ENSPNYG00000013001	chd1l	97	81.473	Pundamilia_nyererei
ENSSLDG00000012714	chd1l	95	72.047	ENSPNAG00000011881	chd1l	85	70.383	Pygocentrus_nattereri
ENSSLDG00000012714	chd1l	95	64.494	ENSRNOG00000017669	Chd1l	95	64.494	Rattus_norvegicus
ENSSLDG00000012714	chd1l	95	63.201	ENSRBIG00000041272	CHD1L	95	62.963	Rhinopithecus_bieti
ENSSLDG00000012714	chd1l	95	63.647	ENSRROG00000041354	CHD1L	95	63.882	Rhinopithecus_roxellana
ENSSLDG00000012714	chd1l	94	62.692	ENSSHAG00000017395	CHD1L	94	62.353	Sarcophilus_harrisii
ENSSLDG00000012714	chd1l	95	72.150	ENSSFOG00015003649	chd1l	96	70.975	Scleropages_formosus
ENSSLDG00000012714	chd1l	95	84.112	ENSSMAG00000019377	chd1l	94	84.346	Scophthalmus_maximus
ENSSLDG00000012714	chd1l	100	96.614	ENSSDUG00000019831	chd1l	100	96.614	Seriola_dumerili
ENSSLDG00000012714	chd1l	96	61.015	ENSSPUG00000016865	CHD1L	97	61.361	Sphenodon_punctatus
ENSSLDG00000012714	chd1l	94	86.967	ENSSPAG00000017653	chd1l	89	87.204	Stegastes_partitus
ENSSLDG00000012714	chd1l	96	62.515	ENSSSCG00000006701	CHD1L	96	62.515	Sus_scrofa
ENSSLDG00000012714	chd1l	94	62.500	ENSTGUG00000013392	-	97	62.972	Taeniopygia_guttata
ENSSLDG00000012714	chd1l	94	68.565	ENSTNIG00000004902	chd1l	99	68.209	Tetraodon_nigroviridis
ENSSLDG00000012714	chd1l	94	61.747	ENSTTRG00000011711	CHD1L	98	61.747	Tursiops_truncatus
ENSSLDG00000012714	chd1l	99	62.640	ENSUAMG00000021991	CHD1L	97	64.009	Ursus_americanus
ENSSLDG00000012714	chd1l	99	62.640	ENSUMAG00000009733	CHD1L	96	64.243	Ursus_maritimus
ENSSLDG00000012714	chd1l	96	63.499	ENSVVUG00000007316	CHD1L	90	63.817	Vulpes_vulpes
ENSSLDG00000012714	chd1l	95	80.756	ENSXCOG00000008336	chd1l	83	80.756	Xiphophorus_couchianus
ENSSLDG00000012714	chd1l	95	82.706	ENSXMAG00000015898	chd1l	99	75.913	Xiphophorus_maculatus