EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000012844 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 26137 bases
Position: chrPEQF01099167.1:1351907-1378043
Accession: 111667297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000016201	DRIM	PF07539.12	2.5e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016797	-	11751	XM_023422957	ENSSLDP00000016201	2817 (aa)	XP_023278725	UPI000C6F7A5E

Gene Model

Click here to download ENSSLDG00000012844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012844	utp20	99	56.763	ENSG00000120800	UTP20	100	56.753	Homo_sapiens
ENSSLDG00000012844	utp20	100	85.724	ENSAPOG00000002429	utp20	100	85.724	Acanthochromis_polyacanthus
ENSSLDG00000012844	utp20	99	56.810	ENSAMEG00000016416	UTP20	100	56.482	Ailuropoda_melanoleuca
ENSSLDG00000012844	utp20	100	83.256	ENSACIG00000007987	utp20	100	83.186	Amphilophus_citrinellus
ENSSLDG00000012844	utp20	60	85.849	ENSAOCG00000015055	utp20	96	85.554	Amphiprion_ocellaris
ENSSLDG00000012844	utp20	100	85.324	ENSAPEG00000011605	utp20	100	85.076	Amphiprion_percula
ENSSLDG00000012844	utp20	98	85.714	ENSATEG00000005601	utp20	100	85.534	Anabas_testudineus
ENSSLDG00000012844	utp20	99	57.533	ENSAPLG00000015651	UTP20	100	56.824	Anas_platyrhynchos
ENSSLDG00000012844	utp20	99	57.380	ENSACAG00000011671	UTP20	100	56.770	Anolis_carolinensis
ENSSLDG00000012844	utp20	99	55.218	ENSANAG00000027152	UTP20	100	55.205	Aotus_nancymaae
ENSSLDG00000012844	utp20	96	85.193	ENSACLG00000008064	utp20	100	85.193	Astatotilapia_calliptera
ENSSLDG00000012844	utp20	100	67.769	ENSAMXG00000021039	utp20	100	67.972	Astyanax_mexicanus
ENSSLDG00000012844	utp20	99	57.764	ENSBTAG00000003239	UTP20	100	57.391	Bos_taurus
ENSSLDG00000012844	utp20	100	56.453	ENSCJAG00000001913	UTP20	100	56.471	Callithrix_jacchus
ENSSLDG00000012844	utp20	99	57.123	ENSCAFG00000006964	UTP20	100	56.991	Canis_familiaris
ENSSLDG00000012844	utp20	99	57.123	ENSCAFG00020024305	UTP20	100	56.991	Canis_lupus_dingo
ENSSLDG00000012844	utp20	99	57.583	ENSCHIG00000009221	UTP20	100	57.016	Capra_hircus
ENSSLDG00000012844	utp20	99	55.874	ENSTSYG00000003040	UTP20	100	55.949	Carlito_syrichta
ENSSLDG00000012844	utp20	99	53.442	ENSCAPG00000014920	UTP20	100	53.035	Cavia_aperea
ENSSLDG00000012844	utp20	100	55.166	ENSCPOG00000003129	UTP20	100	54.950	Cavia_porcellus
ENSSLDG00000012844	utp20	99	56.517	ENSCCAG00000031422	UTP20	100	56.556	Cebus_capucinus
ENSSLDG00000012844	utp20	99	54.568	ENSCATG00000035636	UTP20	100	54.459	Cercocebus_atys
ENSSLDG00000012844	utp20	100	56.389	ENSCLAG00000011569	UTP20	100	56.223	Chinchilla_lanigera
ENSSLDG00000012844	utp20	99	56.749	ENSCSAG00000003388	UTP20	100	56.809	Chlorocebus_sabaeus
ENSSLDG00000012844	utp20	91	74.242	ENSCHOG00000003532	UTP20	94	74.242	Choloepus_hoffmanni
ENSSLDG00000012844	utp20	95	57.562	ENSCPBG00000004844	UTP20	99	57.021	Chrysemys_picta_bellii
ENSSLDG00000012844	utp20	91	30.618	ENSCSAVG00000008252	-	95	30.305	Ciona_savignyi
ENSSLDG00000012844	utp20	96	57.319	ENSCANG00000034768	UTP20	99	57.566	Colobus_angolensis_palliatus
ENSSLDG00000012844	utp20	99	56.086	ENSCGRG00001017151	Utp20	100	56.004	Cricetulus_griseus_chok1gshd
ENSSLDG00000012844	utp20	99	55.839	ENSCGRG00000008595	Utp20	100	55.756	Cricetulus_griseus_crigri
ENSSLDG00000012844	utp20	98	78.362	ENSCSEG00000014760	utp20	99	78.188	Cynoglossus_semilaevis
ENSSLDG00000012844	utp20	99	78.041	ENSCVAG00000001727	utp20	100	78.163	Cyprinodon_variegatus
ENSSLDG00000012844	utp20	99	68.174	ENSDARG00000099280	utp20	99	68.078	Danio_rerio
ENSSLDG00000012844	utp20	99	56.341	ENSDNOG00000016845	UTP20	100	56.276	Dasypus_novemcinctus
ENSSLDG00000012844	utp20	96	59.583	ENSDORG00000014762	Utp20	99	59.384	Dipodomys_ordii
ENSSLDG00000012844	utp20	91	76.812	ENSETEG00000019983	UTP20	91	76.812	Echinops_telfairi
ENSSLDG00000012844	utp20	99	56.683	ENSEASG00005019981	UTP20	99	61.891	Equus_asinus_asinus
ENSSLDG00000012844	utp20	99	56.648	ENSECAG00000006876	UTP20	99	61.891	Equus_caballus
ENSSLDG00000012844	utp20	72	62.500	ENSEEUG00000003774	UTP20	75	60.294	Erinaceus_europaeus
ENSSLDG00000012844	utp20	100	73.677	ENSELUG00000000798	utp20	100	73.712	Esox_lucius
ENSSLDG00000012844	utp20	99	57.032	ENSFCAG00000006150	UTP20	100	57.022	Felis_catus
ENSSLDG00000012844	utp20	94	56.266	ENSFALG00000011135	UTP20	100	55.958	Ficedula_albicollis
ENSSLDG00000012844	utp20	93	52.454	ENSFDAG00000007567	UTP20	97	52.102	Fukomys_damarensis
ENSSLDG00000012844	utp20	98	75.685	ENSFHEG00000004142	utp20	100	75.938	Fundulus_heteroclitus
ENSSLDG00000012844	utp20	99	67.661	ENSGMOG00000006762	utp20	100	67.919	Gadus_morhua
ENSSLDG00000012844	utp20	99	56.949	ENSGALG00000011643	UTP20	100	56.978	Gallus_gallus
ENSSLDG00000012844	utp20	98	76.957	ENSGAFG00000006986	utp20	100	76.735	Gambusia_affinis
ENSSLDG00000012844	utp20	99	80.454	ENSGACG00000019092	utp20	100	80.347	Gasterosteus_aculeatus
ENSSLDG00000012844	utp20	67	60.000	ENSGAGG00000011169	UTP20	97	59.117	Gopherus_agassizii
ENSSLDG00000012844	utp20	99	56.055	ENSGGOG00000004904	UTP20	100	56.044	Gorilla_gorilla
ENSSLDG00000012844	utp20	100	83.002	ENSHBUG00000010613	utp20	100	83.251	Haplochromis_burtoni
ENSSLDG00000012844	utp20	100	55.713	ENSHGLG00000006422	UTP20	100	55.221	Heterocephalus_glaber_female
ENSSLDG00000012844	utp20	100	54.279	ENSHGLG00100001086	UTP20	100	53.822	Heterocephalus_glaber_male
ENSSLDG00000012844	utp20	96	79.034	ENSHCOG00000005421	utp20	97	81.203	Hippocampus_comes
ENSSLDG00000012844	utp20	100	68.052	ENSIPUG00000013717	utp20	100	67.797	Ictalurus_punctatus
ENSSLDG00000012844	utp20	100	56.876	ENSSTOG00000015995	UTP20	100	56.698	Ictidomys_tridecemlineatus
ENSSLDG00000012844	utp20	99	55.323	ENSJJAG00000019321	Utp20	100	54.912	Jaculus_jaculus
ENSSLDG00000012844	utp20	100	76.602	ENSKMAG00000005972	utp20	100	76.904	Kryptolebias_marmoratus
ENSSLDG00000012844	utp20	98	82.099	ENSLBEG00000000781	utp20	100	82.243	Labrus_bergylta
ENSSLDG00000012844	utp20	79	60.198	ENSLACG00000010098	UTP20	99	60.054	Latimeria_chalumnae
ENSSLDG00000012844	utp20	93	63.164	ENSLOCG00000015197	utp20	93	76.136	Lepisosteus_oculatus
ENSSLDG00000012844	utp20	100	56.435	ENSLAFG00000012983	UTP20	100	56.257	Loxodonta_africana
ENSSLDG00000012844	utp20	99	56.416	ENSMFAG00000037766	UTP20	100	56.560	Macaca_fascicularis
ENSSLDG00000012844	utp20	99	56.486	ENSMMUG00000012891	UTP20	100	56.631	Macaca_mulatta
ENSSLDG00000012844	utp20	99	54.931	ENSMNEG00000037418	UTP20	100	54.823	Macaca_nemestrina
ENSSLDG00000012844	utp20	99	54.963	ENSMLEG00000029148	UTP20	99	57.246	Mandrillus_leucophaeus
ENSSLDG00000012844	utp20	100	84.058	ENSMAMG00000002063	utp20	100	84.017	Mastacembelus_armatus
ENSSLDG00000012844	utp20	100	83.451	ENSMZEG00005018123	utp20	100	83.310	Maylandia_zebra
ENSSLDG00000012844	utp20	99	56.943	ENSMGAG00000011726	UTP20	100	56.927	Meleagris_gallopavo
ENSSLDG00000012844	utp20	65	54.724	ENSMAUG00000011898	Utp20	99	54.426	Mesocricetus_auratus
ENSSLDG00000012844	utp20	99	54.658	ENSMICG00000015736	UTP20	100	54.626	Microcebus_murinus
ENSSLDG00000012844	utp20	99	55.241	ENSMOCG00000015242	Utp20	100	55.154	Microtus_ochrogaster
ENSSLDG00000012844	utp20	99	76.776	ENSMMOG00000003360	utp20	100	76.379	Mola_mola
ENSSLDG00000012844	utp20	99	56.334	ENSMODG00000003141	UTP20	100	56.724	Monodelphis_domestica
ENSSLDG00000012844	utp20	100	83.996	ENSMALG00000002723	utp20	100	84.209	Monopterus_albus
ENSSLDG00000012844	utp20	99	56.305	MGP_CAROLIEiJ_G0015713	Utp20	100	56.259	Mus_caroli
ENSSLDG00000012844	utp20	99	56.391	ENSMUSG00000004356	Utp20	100	56.416	Mus_musculus
ENSSLDG00000012844	utp20	99	55.952	MGP_PahariEiJ_G0031372	Utp20	100	56.000	Mus_pahari
ENSSLDG00000012844	utp20	99	56.371	MGP_SPRETEiJ_G0016531	Utp20	93	73.810	Mus_spretus
ENSSLDG00000012844	utp20	100	56.603	ENSMPUG00000011641	UTP20	100	56.854	Mustela_putorius_furo
ENSSLDG00000012844	utp20	99	56.971	ENSMLUG00000002313	UTP20	100	56.608	Myotis_lucifugus
ENSSLDG00000012844	utp20	99	56.122	ENSNGAG00000013738	Utp20	100	55.945	Nannospalax_galili
ENSSLDG00000012844	utp20	80	97.015	ENSNBRG00000019464	utp20	99	97.015	Neolamprologus_brichardi
ENSSLDG00000012844	utp20	99	56.773	ENSNLEG00000006166	UTP20	100	56.692	Nomascus_leucogenys
ENSSLDG00000012844	utp20	89	85.185	ENSMEUG00000015457	UTP20	88	85.185	Notamacropus_eugenii
ENSSLDG00000012844	utp20	85	77.070	ENSOPRG00000010546	UTP20	87	77.070	Ochotona_princeps
ENSSLDG00000012844	utp20	100	56.071	ENSODEG00000013411	UTP20	100	55.614	Octodon_degus
ENSSLDG00000012844	utp20	100	85.179	ENSONIG00000009910	utp20	100	85.143	Oreochromis_niloticus
ENSSLDG00000012844	utp20	99	56.721	ENSOANG00000005578	UTP20	99	56.684	Ornithorhynchus_anatinus
ENSSLDG00000012844	utp20	99	56.734	ENSOCUG00000010475	UTP20	100	56.743	Oryctolagus_cuniculus
ENSSLDG00000012844	utp20	95	76.093	ENSORLG00000008900	utp20	99	76.249	Oryzias_latipes
ENSSLDG00000012844	utp20	95	75.715	ENSORLG00020005879	utp20	99	75.737	Oryzias_latipes_hni
ENSSLDG00000012844	utp20	98	73.589	ENSORLG00015002843	utp20	99	73.377	Oryzias_latipes_hsok
ENSSLDG00000012844	utp20	98	76.271	ENSOMEG00000023583	utp20	100	76.225	Oryzias_melastigma
ENSSLDG00000012844	utp20	99	56.425	ENSOGAG00000015130	UTP20	100	56.400	Otolemur_garnettii
ENSSLDG00000012844	utp20	99	57.284	ENSOARG00000014722	UTP20	100	57.077	Ovis_aries
ENSSLDG00000012844	utp20	99	56.606	ENSPPAG00000001381	UTP20	100	56.596	Pan_paniscus
ENSSLDG00000012844	utp20	99	57.259	ENSPPRG00000001026	UTP20	100	56.951	Panthera_pardus
ENSSLDG00000012844	utp20	99	57.214	ENSPTIG00000020972	UTP20	100	56.880	Panthera_tigris_altaica
ENSSLDG00000012844	utp20	99	56.677	ENSPTRG00000005349	UTP20	100	56.667	Pan_troglodytes
ENSSLDG00000012844	utp20	99	56.557	ENSPANG00000020388	UTP20	100	56.667	Papio_anubis
ENSSLDG00000012844	utp20	100	66.490	ENSPKIG00000007196	utp20	100	66.443	Paramormyrops_kingsleyae
ENSSLDG00000012844	utp20	94	57.620	ENSPSIG00000016689	UTP20	100	57.223	Pelodiscus_sinensis
ENSSLDG00000012844	utp20	100	77.111	ENSPMGG00000004066	utp20	100	77.176	Periophthalmus_magnuspinnatus
ENSSLDG00000012844	utp20	99	56.667	ENSPEMG00000024120	Utp20	100	56.742	Peromyscus_maniculatus_bairdii
ENSSLDG00000012844	utp20	99	55.606	ENSPCIG00000009298	UTP20	100	55.630	Phascolarctos_cinereus
ENSSLDG00000012844	utp20	93	79.245	ENSPFOG00000003312	utp20	100	79.693	Poecilia_formosa
ENSSLDG00000012844	utp20	98	75.674	ENSPLAG00000012874	utp20	100	76.046	Poecilia_latipinna
ENSSLDG00000012844	utp20	96	81.837	ENSPMEG00000005915	utp20	100	75.532	Poecilia_mexicana
ENSSLDG00000012844	utp20	98	76.801	ENSPREG00000013285	utp20	100	76.022	Poecilia_reticulata
ENSSLDG00000012844	utp20	88	56.649	ENSPPYG00000004871	UTP20	100	56.637	Pongo_abelii
ENSSLDG00000012844	utp20	81	70.707	ENSPCAG00000012791	UTP20	81	70.707	Procavia_capensis
ENSSLDG00000012844	utp20	96	56.968	ENSPCOG00000024948	UTP20	100	57.077	Propithecus_coquereli
ENSSLDG00000012844	utp20	99	55.866	ENSPVAG00000008113	UTP20	100	55.760	Pteropus_vampyrus
ENSSLDG00000012844	utp20	100	83.004	ENSPNYG00000011561	utp20	100	82.664	Pundamilia_nyererei
ENSSLDG00000012844	utp20	100	68.230	ENSPNAG00000006176	utp20	100	68.089	Pygocentrus_nattereri
ENSSLDG00000012844	utp20	99	56.407	ENSRNOG00000005823	Utp20	100	56.243	Rattus_norvegicus
ENSSLDG00000012844	utp20	99	55.328	ENSRBIG00000025384	UTP20	100	55.044	Rhinopithecus_bieti
ENSSLDG00000012844	utp20	99	56.698	ENSRROG00000041254	UTP20	100	56.809	Rhinopithecus_roxellana
ENSSLDG00000012844	utp20	99	56.270	ENSSBOG00000035762	UTP20	100	56.319	Saimiri_boliviensis_boliviensis
ENSSLDG00000012844	utp20	98	54.666	ENSSHAG00000002298	UTP20	99	54.776	Sarcophilus_harrisii
ENSSLDG00000012844	utp20	99	67.572	ENSSFOG00015001674	utp20	100	67.644	Scleropages_formosus
ENSSLDG00000012844	utp20	98	82.715	ENSSMAG00000016460	utp20	100	82.709	Scophthalmus_maximus
ENSSLDG00000012844	utp20	100	94.961	ENSSDUG00000013730	utp20	100	94.961	Seriola_dumerili
ENSSLDG00000012844	utp20	60	73.148	ENSSARG00000002796	-	60	73.148	Sorex_araneus
ENSSLDG00000012844	utp20	99	56.250	ENSSPUG00000004513	UTP20	99	55.571	Sphenodon_punctatus
ENSSLDG00000012844	utp20	100	83.676	ENSSPAG00000014674	utp20	100	83.534	Stegastes_partitus
ENSSLDG00000012844	utp20	99	57.052	ENSSSCG00000000869	UTP20	100	56.844	Sus_scrofa
ENSSLDG00000012844	utp20	77	56.284	ENSTGUG00000009053	-	100	56.310	Taeniopygia_guttata
ENSSLDG00000012844	utp20	99	81.476	ENSTRUG00000005849	utp20	99	81.583	Takifugu_rubripes
ENSSLDG00000012844	utp20	99	78.908	ENSTNIG00000006921	utp20	100	79.085	Tetraodon_nigroviridis
ENSSLDG00000012844	utp20	91	53.882	ENSTBEG00000011917	UTP20	92	53.512	Tupaia_belangeri
ENSSLDG00000012844	utp20	97	56.646	ENSTTRG00000017195	UTP20	98	56.441	Tursiops_truncatus
ENSSLDG00000012844	utp20	99	56.603	ENSUAMG00000016363	UTP20	100	56.548	Ursus_americanus
ENSSLDG00000012844	utp20	99	56.104	ENSUMAG00000000077	UTP20	100	56.054	Ursus_maritimus
ENSSLDG00000012844	utp20	89	58.333	ENSVPAG00000011620	UTP20	92	58.136	Vicugna_pacos
ENSSLDG00000012844	utp20	98	58.149	ENSVVUG00000018110	UTP20	99	57.939	Vulpes_vulpes
ENSSLDG00000012844	utp20	98	56.214	ENSXETG00000032346	UTP20	99	56.192	Xenopus_tropicalis
ENSSLDG00000012844	utp20	98	75.957	ENSXMAG00000006503	utp20	100	75.921	Xiphophorus_maculatus