EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000012846 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9539 bases
Position: chrPEQF01099397.1:467017-476555
Accession: 111673476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000016185	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000016781	-	3394	XM_023431236	ENSSLDP00000016185	594 (aa)	XP_023287004	-

Gene Model

Click here to download ENSSLDG00000012846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000012846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000012846	-	65	41.975	ENSSLDG00000009448	si:dkey-33c12.4	60	41.707
ENSSLDG00000012846	-	56	31.627	ENSSLDG00000019386	zgc:123010	52	31.627

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000012846	-	99	65.340	ENSAPOG00000022403	-	91	64.393	Acanthochromis_polyacanthus
ENSSLDG00000012846	-	56	30.723	ENSAPOG00000019633	zgc:123010	54	30.723	Acanthochromis_polyacanthus
ENSSLDG00000012846	-	62	39.437	ENSAPOG00000001034	-	63	39.437	Acanthochromis_polyacanthus
ENSSLDG00000012846	-	75	38.186	ENSAPOG00000005058	si:dkey-33c12.4	53	43.127	Acanthochromis_polyacanthus
ENSSLDG00000012846	-	99	66.667	ENSAOCG00000000431	-	91	65.282	Amphiprion_ocellaris
ENSSLDG00000012846	-	59	43.343	ENSAOCG00000020066	si:dkey-33c12.4	52	43.288	Amphiprion_ocellaris
ENSSLDG00000012846	-	56	30.422	ENSAOCG00000005910	zgc:123010	50	30.422	Amphiprion_ocellaris
ENSSLDG00000012846	-	56	30.422	ENSAPEG00000014305	zgc:123010	53	30.422	Amphiprion_percula
ENSSLDG00000012846	-	99	66.337	ENSAPEG00000023603	-	91	64.628	Amphiprion_percula
ENSSLDG00000012846	-	64	42.857	ENSATEG00000018885	si:dkey-33c12.4	60	42.785	Anabas_testudineus
ENSSLDG00000012846	-	57	35.656	ENSATEG00000001220	zgc:123010	55	35.656	Anabas_testudineus
ENSSLDG00000012846	-	99	68.689	ENSATEG00000018302	-	94	70.813	Anabas_testudineus
ENSSLDG00000012846	-	75	36.475	ENSACLG00000014192	si:dkey-33c12.4	76	36.145	Astatotilapia_calliptera
ENSSLDG00000012846	-	99	63.201	ENSACLG00000003019	-	96	64.521	Astatotilapia_calliptera
ENSSLDG00000012846	-	60	33.019	ENSACLG00000012346	-	57	33.493	Astatotilapia_calliptera
ENSSLDG00000012846	-	79	46.105	ENSAMXG00000010871	si:dkey-33c12.4	57	50.255	Astyanax_mexicanus
ENSSLDG00000012846	-	62	34.048	ENSCPBG00000024454	-	50	34.392	Chrysemys_picta_bellii
ENSSLDG00000012846	-	85	60.456	ENSCSEG00000002755	-	92	59.665	Cynoglossus_semilaevis
ENSSLDG00000012846	-	53	43.849	ENSCVAG00000006564	-	60	39.231	Cyprinodon_variegatus
ENSSLDG00000012846	-	56	31.231	ENSCVAG00000013288	zgc:123010	50	31.231	Cyprinodon_variegatus
ENSSLDG00000012846	-	99	58.678	ENSCVAG00000004187	-	96	58.569	Cyprinodon_variegatus
ENSSLDG00000012846	-	66	48.130	ENSDARG00000057890	si:dkey-33c12.4	58	48.293	Danio_rerio
ENSSLDG00000012846	-	52	31.290	ENSDARG00000039082	zgc:123010	50	31.290	Danio_rerio
ENSSLDG00000012846	-	64	33.594	ENSEBUG00000001368	-	56	34.021	Eptatretus_burgeri
ENSSLDG00000012846	-	55	31.692	ENSELUG00000022008	zgc:123010	58	40.741	Esox_lucius
ENSSLDG00000012846	-	85	39.587	ENSELUG00000002009	si:dkey-33c12.4	87	37.922	Esox_lucius
ENSSLDG00000012846	-	90	45.138	ENSELUG00000001633	-	81	45.037	Esox_lucius
ENSSLDG00000012846	-	52	43.887	ENSFHEG00000005521	si:dkey-33c12.4	59	40.409	Fundulus_heteroclitus
ENSSLDG00000012846	-	95	57.439	ENSFHEG00000009983	-	93	58.115	Fundulus_heteroclitus
ENSSLDG00000012846	-	53	34.434	ENSGMOG00000018473	zgc:123010	76	34.434	Gadus_morhua
ENSSLDG00000012846	-	63	30.133	ENSGALG00000036747	TTC31	62	30.585	Gallus_gallus
ENSSLDG00000012846	-	52	31.310	ENSGAFG00000009373	zgc:123010	56	32.787	Gambusia_affinis
ENSSLDG00000012846	-	99	59.934	ENSGAFG00000016594	-	91	61.093	Gambusia_affinis
ENSSLDG00000012846	-	56	31.642	ENSGACG00000007620	zgc:123010	70	31.642	Gasterosteus_aculeatus
ENSSLDG00000012846	-	75	36.511	ENSHBUG00000010735	si:dkey-33c12.4	73	36.660	Haplochromis_burtoni
ENSSLDG00000012846	-	60	33.019	ENSHBUG00000016720	-	57	33.493	Haplochromis_burtoni
ENSSLDG00000012846	-	79	46.234	ENSIPUG00000005998	si:dkey-33c12.4	57	49.873	Ictalurus_punctatus
ENSSLDG00000012846	-	54	43.252	ENSKMAG00000016610	si:dkey-33c12.4	54	41.598	Kryptolebias_marmoratus
ENSSLDG00000012846	-	99	62.355	ENSKMAG00000006468	-	93	63.018	Kryptolebias_marmoratus
ENSSLDG00000012846	-	76	31.193	ENSKMAG00000021350	zgc:123010	50	30.422	Kryptolebias_marmoratus
ENSSLDG00000012846	-	99	59.900	ENSLBEG00000028046	-	91	58.264	Labrus_bergylta
ENSSLDG00000012846	-	56	31.928	ENSLBEG00000023984	zgc:123010	50	31.928	Labrus_bergylta
ENSSLDG00000012846	-	61	40.164	ENSLBEG00000021088	-	58	39.572	Labrus_bergylta
ENSSLDG00000012846	-	61	40.000	ENSLBEG00000017203	-	56	40.000	Labrus_bergylta
ENSSLDG00000012846	-	53	36.709	ENSLACG00000009001	zgc:123010	61	36.709	Latimeria_chalumnae
ENSSLDG00000012846	-	84	35.029	ENSLACG00000004602	-	71	36.446	Latimeria_chalumnae
ENSSLDG00000012846	-	74	44.516	ENSLOCG00000001861	-	68	45.895	Lepisosteus_oculatus
ENSSLDG00000012846	-	63	33.962	ENSMAMG00000002460	-	68	33.962	Mastacembelus_armatus
ENSSLDG00000012846	-	63	33.491	ENSMAMG00000002377	-	65	33.491	Mastacembelus_armatus
ENSSLDG00000012846	-	70	40.749	ENSMAMG00000000111	si:dkey-33c12.4	61	41.687	Mastacembelus_armatus
ENSSLDG00000012846	-	99	63.576	ENSMAMG00000004311	-	89	63.194	Mastacembelus_armatus
ENSSLDG00000012846	-	57	36.402	ENSMAMG00000001145	zgc:123010	67	36.402	Mastacembelus_armatus
ENSSLDG00000012846	-	99	64.521	ENSMZEG00005000585	-	96	65.182	Maylandia_zebra
ENSSLDG00000012846	-	75	36.270	ENSMZEG00005014276	si:dkey-33c12.4	73	36.456	Maylandia_zebra
ENSSLDG00000012846	-	60	33.491	ENSMZEG00005014740	-	71	33.491	Maylandia_zebra
ENSSLDG00000012846	-	99	68.647	ENSMALG00000003167	-	91	66.997	Monopterus_albus
ENSSLDG00000012846	-	63	31.117	ENSMALG00000017698	zgc:123010	55	31.117	Monopterus_albus
ENSSLDG00000012846	-	53	46.855	ENSMALG00000002265	si:dkey-33c12.4	61	42.000	Monopterus_albus
ENSSLDG00000012846	-	99	65.289	ENSONIG00000007538	-	93	66.281	Oreochromis_niloticus
ENSSLDG00000012846	-	99	57.591	ENSORLG00000030385	-	91	57.475	Oryzias_latipes
ENSSLDG00000012846	-	56	30.631	ENSORLG00000007675	zgc:123010	55	31.024	Oryzias_latipes
ENSSLDG00000012846	-	55	41.994	ENSORLG00000029651	si:dkey-33c12.4	55	41.193	Oryzias_latipes
ENSSLDG00000012846	-	56	31.532	ENSORLG00020003457	zgc:123010	56	31.928	Oryzias_latipes_hni
ENSSLDG00000012846	-	58	40.845	ENSORLG00020008750	si:dkey-33c12.4	51	41.026	Oryzias_latipes_hni
ENSSLDG00000012846	-	99	58.086	ENSORLG00015008400	-	91	57.973	Oryzias_latipes_hsok
ENSSLDG00000012846	-	56	30.631	ENSORLG00015008373	zgc:123010	50	31.024	Oryzias_latipes_hsok
ENSSLDG00000012846	-	56	30.422	ENSOMEG00000003408	zgc:123010	50	30.422	Oryzias_melastigma
ENSSLDG00000012846	-	76	34.156	ENSOMEG00000008913	-	72	34.091	Oryzias_melastigma
ENSSLDG00000012846	-	99	59.835	ENSOMEG00000009428	-	91	60.067	Oryzias_melastigma
ENSSLDG00000012846	-	96	41.753	ENSPKIG00000011819	-	56	47.174	Paramormyrops_kingsleyae
ENSSLDG00000012846	-	51	35.211	ENSPMAG00000009352	-	74	46.575	Petromyzon_marinus
ENSSLDG00000012846	-	78	65.745	ENSPFOG00000017092	-	95	66.245	Poecilia_formosa
ENSSLDG00000012846	-	58	43.575	ENSPLAG00000022537	si:dkey-33c12.4	50	44.543	Poecilia_latipinna
ENSSLDG00000012846	-	99	61.960	ENSPMEG00000009905	-	93	62.871	Poecilia_mexicana
ENSSLDG00000012846	-	99	61.130	ENSPREG00000016861	-	95	62.645	Poecilia_reticulata
ENSSLDG00000012846	-	75	36.270	ENSPNYG00000018262	si:dkey-33c12.4	73	36.456	Pundamilia_nyererei
ENSSLDG00000012846	-	99	64.356	ENSPNYG00000001047	-	96	65.017	Pundamilia_nyererei
ENSSLDG00000012846	-	65	49.873	ENSPNAG00000018386	si:dkey-33c12.4	57	49.873	Pygocentrus_nattereri
ENSSLDG00000012846	-	63	38.028	ENSSFOG00015021394	zgc:123010	54	38.028	Scleropages_formosus
ENSSLDG00000012846	-	65	47.558	ENSSFOG00015005186	-	56	48.593	Scleropages_formosus
ENSSLDG00000012846	-	79	42.217	ENSSFOG00015009199	-	58	46.392	Scleropages_formosus
ENSSLDG00000012846	-	86	36.984	ENSSMAG00000008147	si:dkey-33c12.4	51	43.539	Scophthalmus_maximus
ENSSLDG00000012846	-	50	37.500	ENSSMAG00000002904	zgc:123010	50	40.000	Scophthalmus_maximus
ENSSLDG00000012846	-	99	72.333	ENSSMAG00000010960	-	91	71.906	Scophthalmus_maximus
ENSSLDG00000012846	-	56	31.627	ENSSDUG00000008651	zgc:123010	50	31.627	Seriola_dumerili
ENSSLDG00000012846	-	100	97.987	ENSSDUG00000010976	-	97	97.987	Seriola_dumerili
ENSSLDG00000012846	-	70	41.743	ENSSDUG00000003213	si:dkey-33c12.4	64	42.512	Seriola_dumerili
ENSSLDG00000012846	-	77	30.240	ENSSPAG00000013621	zgc:123010	52	30.117	Stegastes_partitus
ENSSLDG00000012846	-	55	44.207	ENSSPAG00000022577	-	54	43.684	Stegastes_partitus
ENSSLDG00000012846	-	99	65.947	ENSSPAG00000004843	-	91	65.000	Stegastes_partitus
ENSSLDG00000012846	-	99	43.144	ENSTRUG00000000057	-	90	41.653	Takifugu_rubripes
ENSSLDG00000012846	-	56	43.642	ENSXMAG00000018535	si:dkey-33c12.4	66	37.691	Xiphophorus_maculatus