EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000013025 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
9068 bases
Position
chrPEQF01096605.1:310634-319701
Accession
111650094
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000016473PABPPF00658.185.9e-3111
ENSSLDP00000016445PABPPF00658.186.7e-3111
ENSSLDP00000016473RRM_5PF13893.65.9e-1012
ENSSLDP00000016473RRM_5PF13893.65.9e-1022
ENSSLDP00000016445RRM_5PF13893.68.7e-1012
ENSSLDP00000016445RRM_5PF13893.68.7e-1022
ENSSLDP00000016473RRM_1PF00076.221e-9014
ENSSLDP00000016473RRM_1PF00076.221e-9024
ENSSLDP00000016473RRM_1PF00076.221e-9034
ENSSLDP00000016473RRM_1PF00076.221e-9044
ENSSLDP00000016445RRM_1PF00076.221.5e-9014
ENSSLDP00000016445RRM_1PF00076.221.5e-9024
ENSSLDP00000016445RRM_1PF00076.221.5e-9034
ENSSLDP00000016445RRM_1PF00076.221.5e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000017041-3305XM_023399882ENSSLDP00000016445627 (aa)XP_023255650UPI000BBF172C
ENSSLDT00000017070-1755-ENSSLDP00000016473584 (aa)--
Gene Model
Click here to download ENSSLDG00000013025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000013025pabpc49668.081ENSSLDG00000006981pabpc1l9881.340
ENSSLDG00000013025pabpc46334.940ENSSLDG00000005260elavl48134.940
ENSSLDG00000013025pabpc46378.519ENSSLDG00000009165-9978.519
ENSSLDG00000013025pabpc46536.364ENSSLDG00000015302celf3b8934.375
ENSSLDG00000013025pabpc46436.145ENSSLDG00000013769elavl39236.145
ENSSLDG00000013025pabpc45232.278ENSSLDG00000017621rbm455832.278
ENSSLDG00000013025pabpc45337.500ENSSLDG00000009847celf5a5637.500
ENSSLDG00000013025pabpc45837.500ENSSLDG00000012863celf17035.238
ENSSLDG00000013025pabpc46336.145ENSSLDG00000008455ELAVL29236.145
ENSSLDG00000013025pabpc46132.558ENSSLDG00000024011puf60b5631.250
ENSSLDG00000013025pabpc49876.433ENSSLDG00000011661pabpc1a9876.115
ENSSLDG00000013025pabpc49975.353ENSSLDG00000014156pabpc1b9975.197
ENSSLDG00000013025pabpc46433.981ENSSLDG00000003394rbms2a5133.981
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000013025pabpc410084.395ENSG00000090621PABPC49996.396Homo_sapiens
ENSSLDG00000013025pabpc410097.448ENSAPOG00000001161pabpc410097.448Acanthochromis_polyacanthus
ENSSLDG00000013025pabpc49849.758ENSAMEG00000015083-9849.029Ailuropoda_melanoleuca
ENSSLDG00000013025pabpc49785.366ENSAMEG00000011535-9979.091Ailuropoda_melanoleuca
ENSSLDG00000013025pabpc410096.044ENSACIG00000023343pabpc49996.308Amphilophus_citrinellus
ENSSLDG00000013025pabpc410097.927ENSAOCG00000021529pabpc410097.927Amphiprion_ocellaris
ENSSLDG00000013025pabpc410097.927ENSAPEG00000019196pabpc410097.927Amphiprion_percula
ENSSLDG00000013025pabpc410097.611ENSATEG00000007402pabpc410097.611Anabas_testudineus
ENSSLDG00000013025pabpc49985.354ENSAPLG00000009729-9985.374Anas_platyrhynchos
ENSSLDG00000013025pabpc49884.574ENSACAG00000002544PABPC49984.588Anolis_carolinensis
ENSSLDG00000013025pabpc410082.969ENSANAG00000025079PABPC49982.726Aotus_nancymaae
ENSSLDG00000013025pabpc410096.332ENSACLG00000019558pabpc410096.332Astatotilapia_calliptera
ENSSLDG00000013025pabpc49986.054ENSAMXG00000018779pabpc49886.656Astyanax_mexicanus
ENSSLDG00000013025pabpc46284.431ENSBTAG00000048536-9384.431Bos_taurus
ENSSLDG00000013025pabpc49785.588ENSBTAG00000017125PABPC49980.775Bos_taurus
ENSSLDG00000013025pabpc47480.357ENSCJAG00000045953-8578.571Callithrix_jacchus
ENSSLDG00000013025pabpc410082.969ENSCJAG00000002512-9982.726Callithrix_jacchus
ENSSLDG00000013025pabpc410082.969ENSCAFG00000003081PABPC49982.726Canis_familiaris
ENSSLDG00000013025pabpc49785.588ENSCAFG00020004161PABPC49979.242Canis_lupus_dingo
ENSSLDG00000013025pabpc49785.217ENSCHIG00000019398-9979.091Capra_hircus
ENSSLDG00000013025pabpc410064.915ENSCHIG00000023385-9964.780Capra_hircus
ENSSLDG00000013025pabpc410082.969ENSTSYG00000006532PABPC49982.726Carlito_syrichta
ENSSLDG00000013025pabpc49982.880ENSCAPG00000015984PABPC49982.484Cavia_aperea
ENSSLDG00000013025pabpc49785.366ENSCPOG00000009552PABPC49982.726Cavia_porcellus
ENSSLDG00000013025pabpc410082.969ENSCCAG00000037306PABPC49982.726Cebus_capucinus
ENSSLDG00000013025pabpc410082.969ENSCATG00000042164PABPC49982.726Cercocebus_atys
ENSSLDG00000013025pabpc49786.087ENSCLAG00000011899PABPC49982.726Chinchilla_lanigera
ENSSLDG00000013025pabpc49785.588ENSCSAG00000001135PABPC49979.242Chlorocebus_sabaeus
ENSSLDG00000013025pabpc49089.167ENSCHOG00000005327PABPC47989.218Choloepus_hoffmanni
ENSSLDG00000013025pabpc49986.299ENSCPBG00000001038PABPC49986.328Chrysemys_picta_bellii
ENSSLDG00000013025pabpc49983.201ENSCANG00000034177PABPC49982.958Colobus_angolensis_palliatus
ENSSLDG00000013025pabpc49489.216ENSCGRG00001018166Pabpc49884.603Cricetulus_griseus_chok1gshd
ENSSLDG00000013025pabpc49785.479ENSCGRG00000009777Pabpc49884.868Cricetulus_griseus_crigri
ENSSLDG00000013025pabpc410096.332ENSCSEG00000000130pabpc410096.332Cynoglossus_semilaevis
ENSSLDG00000013025pabpc49996.104ENSCVAG00000019246pabpc49996.552Cyprinodon_variegatus
ENSSLDG00000013025pabpc49892.663ENSDARG00000059259pabpc410092.397Danio_rerio
ENSSLDG00000013025pabpc49389.216ENSDNOG00000018444-9981.607Dasypus_novemcinctus
ENSSLDG00000013025pabpc49785.588ENSDORG00000011581Pabpc49981.211Dipodomys_ordii
ENSSLDG00000013025pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSSLDG00000013025pabpc48554.275ENSETEG00000009172-9952.285Echinops_telfairi
ENSSLDG00000013025pabpc49677.236ENSEBUG00000013782pabpc49976.752Eptatretus_burgeri
ENSSLDG00000013025pabpc49976.349ENSEBUG00000000992pabpc410076.032Eptatretus_burgeri
ENSSLDG00000013025pabpc49785.588ENSEASG00005014119PABPC49979.242Equus_asinus_asinus
ENSSLDG00000013025pabpc49785.588ENSECAG00000009396PABPC49979.242Equus_caballus
ENSSLDG00000013025pabpc48990.024ENSEEUG00000002962PABPC49977.879Erinaceus_europaeus
ENSSLDG00000013025pabpc49892.675ENSELUG00000003195pabpc49992.381Esox_lucius
ENSSLDG00000013025pabpc410082.969ENSFCAG00000015254-9982.726Felis_catus
ENSSLDG00000013025pabpc49985.489ENSFALG00000000543PABPC49985.510Ficedula_albicollis
ENSSLDG00000013025pabpc48951.163ENSFDAG00000010581-9949.396Fukomys_damarensis
ENSSLDG00000013025pabpc49785.588ENSFDAG00000020016-9979.242Fukomys_damarensis
ENSSLDG00000013025pabpc49996.006ENSFHEG00000007548pabpc49996.602Fundulus_heteroclitus
ENSSLDG00000013025pabpc410090.439ENSGMOG00000019025pabpc49991.097Gadus_morhua
ENSSLDG00000013025pabpc49986.299ENSGALG00000003800PABPC49986.328Gallus_gallus
ENSSLDG00000013025pabpc49997.368ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSSLDG00000013025pabpc410094.896ENSGACG00000007179pabpc49995.307Gasterosteus_aculeatus
ENSSLDG00000013025pabpc49986.457ENSGAGG00000001888PABPC49986.486Gopherus_agassizii
ENSSLDG00000013025pabpc410082.969ENSGGOG00000004002PABPC49982.726Gorilla_gorilla
ENSSLDG00000013025pabpc410096.172ENSHBUG00000020206pabpc49996.440Haplochromis_burtoni
ENSSLDG00000013025pabpc49785.588ENSHGLG00000011162PABPC49982.567Heterocephalus_glaber_female
ENSSLDG00000013025pabpc49785.588ENSHGLG00100001580PABPC49982.567Heterocephalus_glaber_male
ENSSLDG00000013025pabpc410094.099ENSHCOG00000012694pabpc49995.793Hippocampus_comes
ENSSLDG00000013025pabpc49792.258ENSIPUG00000016620pabpc49992.026Ictalurus_punctatus
ENSSLDG00000013025pabpc410084.236ENSSTOG00000010416PABPC49984.006Ictidomys_tridecemlineatus
ENSSLDG00000013025pabpc49785.217ENSJJAG00000007781Pabpc49979.814Jaculus_jaculus
ENSSLDG00000013025pabpc49995.215ENSKMAG00000013597pabpc49995.800Kryptolebias_marmoratus
ENSSLDG00000013025pabpc410096.349ENSLBEG00000013654pabpc410096.349Labrus_bergylta
ENSSLDG00000013025pabpc49986.321ENSLACG00000011907PABPC49986.508Latimeria_chalumnae
ENSSLDG00000013025pabpc49990.551ENSLOCG00000001877pabpc49991.388Lepisosteus_oculatus
ENSSLDG00000013025pabpc410084.554ENSLAFG00000000151PABPC49984.330Loxodonta_africana
ENSSLDG00000013025pabpc410082.969ENSMFAG00000041481PABPC49982.726Macaca_fascicularis
ENSSLDG00000013025pabpc49785.588ENSMMUG00000007497PABPC49979.242Macaca_mulatta
ENSSLDG00000013025pabpc410082.812ENSMNEG00000043054PABPC49982.567Macaca_nemestrina
ENSSLDG00000013025pabpc410082.969ENSMLEG00000040716PABPC49982.726Mandrillus_leucophaeus
ENSSLDG00000013025pabpc410097.608ENSMAMG00000010025pabpc410097.608Mastacembelus_armatus
ENSSLDG00000013025pabpc410096.172ENSMZEG00005006141pabpc49996.440Maylandia_zebra
ENSSLDG00000013025pabpc49882.601ENSMGAG00000005408PABPC49982.594Meleagris_gallopavo
ENSSLDG00000013025pabpc49873.620ENSMAUG00000019763-8290.816Mesocricetus_auratus
ENSSLDG00000013025pabpc47278.571ENSMAUG00000001295-9777.619Mesocricetus_auratus
ENSSLDG00000013025pabpc46280.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSSLDG00000013025pabpc48490.000ENSMICG00000016633-10083.814Microcebus_murinus
ENSSLDG00000013025pabpc49974.286ENSMICG00000036729-9973.321Microcebus_murinus
ENSSLDG00000013025pabpc410083.758ENSMOCG00000006763Pabpc49883.657Microtus_ochrogaster
ENSSLDG00000013025pabpc410093.301ENSMMOG00000002363pabpc49993.204Mola_mola
ENSSLDG00000013025pabpc46470.667ENSMODG00000018051-9670.667Monodelphis_domestica
ENSSLDG00000013025pabpc49787.611ENSMODG00000017657-9982.595Monodelphis_domestica
ENSSLDG00000013025pabpc45083.673ENSMODG00000019847-6783.673Monodelphis_domestica
ENSSLDG00000013025pabpc410097.933ENSMALG00000011017pabpc410097.933Monopterus_albus
ENSSLDG00000013025pabpc49184.225MGP_CAROLIEiJ_G0024864-9973.393Mus_caroli
ENSSLDG00000013025pabpc49785.217MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSSLDG00000013025pabpc410084.076ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSSLDG00000013025pabpc49585.520MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSSLDG00000013025pabpc49585.217MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSSLDG00000013025pabpc49545.499ENSMPUG00000006836-10045.156Mustela_putorius_furo
ENSSLDG00000013025pabpc49785.588ENSMPUG00000014414-9979.242Mustela_putorius_furo
ENSSLDG00000013025pabpc410084.236ENSMLUG00000012068PABPC49984.006Myotis_lucifugus
ENSSLDG00000013025pabpc410084.554ENSNGAG00000018292Pabpc49985.588Nannospalax_galili
ENSSLDG00000013025pabpc46498.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSSLDG00000013025pabpc47097.605ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSSLDG00000013025pabpc410082.969ENSNLEG00000011928PABPC49985.588Nomascus_leucogenys
ENSSLDG00000013025pabpc48893.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSSLDG00000013025pabpc45782.857ENSODEG00000013457-10082.857Octodon_degus
ENSSLDG00000013025pabpc49973.085ENSODEG00000017434-9972.458Octodon_degus
ENSSLDG00000013025pabpc49785.366ENSODEG00000006592-9982.092Octodon_degus
ENSSLDG00000013025pabpc410096.172ENSONIG00000008176pabpc49996.440Oreochromis_niloticus
ENSSLDG00000013025pabpc49985.827ENSOANG00000010001PABPC49985.851Ornithorhynchus_anatinus
ENSSLDG00000013025pabpc49191.566ENSOCUG00000000562PABPC48879.278Oryctolagus_cuniculus
ENSSLDG00000013025pabpc49996.605ENSORLG00000017479pabpc49896.605Oryzias_latipes
ENSSLDG00000013025pabpc49996.605ENSORLG00020018644pabpc49896.605Oryzias_latipes_hni
ENSSLDG00000013025pabpc49996.605ENSORLG00015015042pabpc49896.605Oryzias_latipes_hsok
ENSSLDG00000013025pabpc49995.793ENSOMEG00000014410pabpc49895.793Oryzias_melastigma
ENSSLDG00000013025pabpc49785.588ENSOGAG00000004067PABPC49980.680Otolemur_garnettii
ENSSLDG00000013025pabpc49785.217ENSOARG00000020060PABPC49979.091Ovis_aries
ENSSLDG00000013025pabpc410082.969ENSPPAG00000043625PABPC49982.726Pan_paniscus
ENSSLDG00000013025pabpc410082.969ENSPPRG00000024727PABPC49982.726Panthera_pardus
ENSSLDG00000013025pabpc410082.969ENSPTIG00000005829PABPC49982.726Panthera_tigris_altaica
ENSSLDG00000013025pabpc410082.969ENSPTRG00000000573PABPC49982.726Pan_troglodytes
ENSSLDG00000013025pabpc410082.969ENSPANG00000009484PABPC49982.726Papio_anubis
ENSSLDG00000013025pabpc410090.282ENSPKIG00000025356pabpc49991.097Paramormyrops_kingsleyae
ENSSLDG00000013025pabpc49986.614ENSPSIG00000016892PABPC49986.645Pelodiscus_sinensis
ENSSLDG00000013025pabpc410092.344ENSPMGG00000009073pabpc49992.071Periophthalmus_magnuspinnatus
ENSSLDG00000013025pabpc49786.957ENSPEMG00000023569-9983.201Peromyscus_maniculatus_bairdii
ENSSLDG00000013025pabpc49786.957ENSPEMG00000024193-9980.315Peromyscus_maniculatus_bairdii
ENSSLDG00000013025pabpc49574.370ENSPMAG00000007885pabpc410073.116Petromyzon_marinus
ENSSLDG00000013025pabpc48874.913ENSPMAG00000002836pabpc410075.610Petromyzon_marinus
ENSSLDG00000013025pabpc49786.838ENSPCIG00000020674PABPC49994.175Phascolarctos_cinereus
ENSSLDG00000013025pabpc49995.208ENSPFOG00000002682pabpc49995.793Poecilia_formosa
ENSSLDG00000013025pabpc49995.367ENSPLAG00000010112pabpc49995.955Poecilia_latipinna
ENSSLDG00000013025pabpc49896.104ENSPMEG00000019739pabpc49995.955Poecilia_mexicana
ENSSLDG00000013025pabpc49995.687ENSPREG00000001589pabpc49996.117Poecilia_reticulata
ENSSLDG00000013025pabpc49785.588ENSPPYG00000001506PABPC49979.242Pongo_abelii
ENSSLDG00000013025pabpc49784.348ENSPCAG00000003341PABPC49974.394Procavia_capensis
ENSSLDG00000013025pabpc49785.588ENSPCOG00000023725-9982.595Propithecus_coquereli
ENSSLDG00000013025pabpc49968.981ENSPCOG00000025882-9868.981Propithecus_coquereli
ENSSLDG00000013025pabpc49884.715ENSPVAG00000002187PABPC49977.983Pteropus_vampyrus
ENSSLDG00000013025pabpc410096.332ENSPNYG00000006134pabpc410096.332Pundamilia_nyererei
ENSSLDG00000013025pabpc49993.185ENSPNAG00000024355pabpc49994.212Pygocentrus_nattereri
ENSSLDG00000013025pabpc49785.217ENSRNOG00000015642Pabpc49981.056Rattus_norvegicus
ENSSLDG00000013025pabpc410078.931ENSRNOG00000028592AABR07035074.19978.882Rattus_norvegicus
ENSSLDG00000013025pabpc410082.969ENSRBIG00000039761PABPC49982.726Rhinopithecus_bieti
ENSSLDG00000013025pabpc410082.969ENSRROG00000033355PABPC49982.726Rhinopithecus_roxellana
ENSSLDG00000013025pabpc410082.969ENSSBOG00000026193PABPC49982.726Saimiri_boliviensis_boliviensis
ENSSLDG00000013025pabpc49786.838ENSSHAG00000018139PABPC49986.010Sarcophilus_harrisii
ENSSLDG00000013025pabpc49991.176ENSSFOG00015023514pabpc49991.708Scleropages_formosus
ENSSLDG00000013025pabpc410096.810ENSSMAG00000009007pabpc410096.810Scophthalmus_maximus
ENSSLDG00000013025pabpc4100100.000ENSSDUG00000012683pabpc4100100.000Seriola_dumerili
ENSSLDG00000013025pabpc49783.478ENSSARG00000000310PABPC49972.879Sorex_araneus
ENSSLDG00000013025pabpc49987.122ENSSPUG00000003204PABPC49987.159Sphenodon_punctatus
ENSSLDG00000013025pabpc410098.086ENSSPAG00000009252pabpc410098.086Stegastes_partitus
ENSSLDG00000013025pabpc48844.345ENSSSCG00000036170-9544.384Sus_scrofa
ENSSLDG00000013025pabpc410082.969ENSSSCG00000003660-9982.726Sus_scrofa
ENSSLDG00000013025pabpc49688.027ENSTGUG00000001266PABPC49988.027Taeniopygia_guttata
ENSSLDG00000013025pabpc410095.215ENSTRUG00000005907pabpc49995.631Takifugu_rubripes
ENSSLDG00000013025pabpc410088.676ENSTNIG00000016902pabpc49988.835Tetraodon_nigroviridis
ENSSLDG00000013025pabpc49585.217ENSTBEG00000009035PABPC49968.235Tupaia_belangeri
ENSSLDG00000013025pabpc49585.217ENSTTRG00000014340PABPC47987.736Tursiops_truncatus
ENSSLDG00000013025pabpc410082.969ENSUAMG00000000303PABPC49982.726Ursus_americanus
ENSSLDG00000013025pabpc410088.889ENSUMAG00000019585PABPC49991.084Ursus_maritimus
ENSSLDG00000013025pabpc47169.617ENSVPAG00000010041PABPC47369.617Vicugna_pacos
ENSSLDG00000013025pabpc410082.969ENSVVUG00000005215PABPC49982.726Vulpes_vulpes
ENSSLDG00000013025pabpc49981.890ENSXETG00000010946pabpc49982.035Xenopus_tropicalis
ENSSLDG00000013025pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSSLDG00000013025pabpc49996.834ENSXCOG00000013190pabpc49695.283Xiphophorus_couchianus
ENSSLDG00000013025pabpc49995.687ENSXMAG00000019007pabpc49996.117Xiphophorus_maculatus

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