EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000013075 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 12703 bases
Position: chrPEQF01099173.1:888603-901305
Accession: 111667945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000016555	KH_1	PF00013.29	3.6e-06	1	1
ENSSLDP00000016555	zf-CCHC	PF00098.23	0.00048	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000017152	-	4712	XM_023423810	ENSSLDP00000016555	676 (aa)	XP_023279578	UPI000C6F8431

Gene Model

Click here to download ENSSLDG00000013075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013075	sf1	68	87.090	ENSACIG00000016514	sf1	66	87.090	Amphilophus_citrinellus
ENSSLDG00000013075	sf1	84	63.262	ENSANAG00000022607	-	75	79.439	Aotus_nancymaae
ENSSLDG00000013075	sf1	61	77.570	ENSANAG00000026664	-	97	76.540	Aotus_nancymaae
ENSSLDG00000013075	sf1	61	76.402	ENSCJAG00000002780	SF1	75	67.823	Callithrix_jacchus
ENSSLDG00000013075	sf1	61	76.402	ENSCAFG00000014239	SF1	59	79.949	Canis_familiaris
ENSSLDG00000013075	sf1	61	76.402	ENSCAFG00020014381	SF1	59	79.949	Canis_lupus_dingo
ENSSLDG00000013075	sf1	59	77.240	ENSCAPG00000010762	SF1	65	81.283	Cavia_aperea
ENSSLDG00000013075	sf1	60	76.905	ENSCPOG00000012290	SF1	58	81.016	Cavia_porcellus
ENSSLDG00000013075	sf1	61	76.402	ENSCCAG00000037881	SF1	97	76.540	Cebus_capucinus
ENSSLDG00000013075	sf1	59	72.030	ENSCCAG00000023781	-	71	79.091	Cebus_capucinus
ENSSLDG00000013075	sf1	61	76.402	ENSCATG00000011564	SF1	90	80.206	Cercocebus_atys
ENSSLDG00000013075	sf1	57	71.859	ENSCHOG00000006008	SF1	66	75.209	Choloepus_hoffmanni
ENSSLDG00000013075	sf1	62	82.588	ENSCPBG00000023763	SF1	51	79.302	Chrysemys_picta_bellii
ENSSLDG00000013075	sf1	60	55.294	ENSCING00000005564	-	83	56.355	Ciona_intestinalis
ENSSLDG00000013075	sf1	51	56.284	ENSCSAVG00000009055	-	60	67.315	Ciona_savignyi
ENSSLDG00000013075	sf1	61	76.402	ENSCANG00000042201	SF1	91	80.206	Colobus_angolensis_palliatus
ENSSLDG00000013075	sf1	61	76.636	ENSCGRG00001003677	Sf1	66	80.720	Cricetulus_griseus_chok1gshd
ENSSLDG00000013075	sf1	59	77.482	ENSCGRG00000001708	Sf1	65	81.818	Cricetulus_griseus_crigri
ENSSLDG00000013075	sf1	61	76.402	ENSDORG00000016334	Sf1	59	79.949	Dipodomys_ordii
ENSSLDG00000013075	sf1	53	77.540	ENSEEUG00000001058	SF1	83	81.737	Erinaceus_europaeus
ENSSLDG00000013075	sf1	78	80.037	ENSELUG00000013225	sf1	54	89.183	Esox_lucius
ENSSLDG00000013075	sf1	61	76.402	ENSFCAG00000012231	SF1	75	67.829	Felis_catus
ENSSLDG00000013075	sf1	59	77.240	ENSFDAG00000009833	SF1	65	81.283	Fukomys_damarensis
ENSSLDG00000013075	sf1	73	78.049	ENSGMOG00000007469	sf1	61	93.175	Gadus_morhua
ENSSLDG00000013075	sf1	90	89.309	ENSGAFG00000019284	sf1	74	89.716	Gambusia_affinis
ENSSLDG00000013075	sf1	62	82.353	ENSGAGG00000021691	SF1	68	71.370	Gopherus_agassizii
ENSSLDG00000013075	sf1	61	76.402	ENSHGLG00000009541	SF1	66	80.206	Heterocephalus_glaber_female
ENSSLDG00000013075	sf1	59	77.240	ENSHGLG00100013879	-	65	81.283	Heterocephalus_glaber_male
ENSSLDG00000013075	sf1	70	87.553	ENSHCOG00000011388	sf1	67	87.991	Hippocampus_comes
ENSSLDG00000013075	sf1	59	77.240	ENSSTOG00000009790	-	58	81.016	Ictidomys_tridecemlineatus
ENSSLDG00000013075	sf1	55	71.053	ENSSTOG00000024353	-	67	70.681	Ictidomys_tridecemlineatus
ENSSLDG00000013075	sf1	84	91.958	ENSKMAG00000005854	sf1	70	90.175	Kryptolebias_marmoratus
ENSSLDG00000013075	sf1	68	90.558	ENSLBEG00000019836	sf1	72	90.713	Labrus_bergylta
ENSSLDG00000013075	sf1	68	78.647	ENSLOCG00000002130	sf1	72	80.297	Lepisosteus_oculatus
ENSSLDG00000013075	sf1	61	77.778	ENSLAFG00000007201	SF1	58	80.577	Loxodonta_africana
ENSSLDG00000013075	sf1	61	76.402	ENSMFAG00000033122	SF1	90	80.206	Macaca_fascicularis
ENSSLDG00000013075	sf1	61	76.402	ENSMMUG00000022606	SF1	90	80.526	Macaca_mulatta
ENSSLDG00000013075	sf1	61	76.402	ENSMNEG00000037901	SF1	90	80.206	Macaca_nemestrina
ENSSLDG00000013075	sf1	59	76.998	ENSMLEG00000040706	SF1	88	81.283	Mandrillus_leucophaeus
ENSSLDG00000013075	sf1	61	76.636	ENSMAUG00000014064	Sf1	66	80.720	Mesocricetus_auratus
ENSSLDG00000013075	sf1	61	76.402	ENSMICG00000001202	SF1	90	80.000	Microcebus_murinus
ENSSLDG00000013075	sf1	61	76.636	ENSMOCG00000022038	Sf1	66	80.720	Microtus_ochrogaster
ENSSLDG00000013075	sf1	86	88.165	ENSMMOG00000020474	sf1	84	90.526	Mola_mola
ENSSLDG00000013075	sf1	60	77.381	ENSMODG00000029407	SF1	80	80.789	Monodelphis_domestica
ENSSLDG00000013075	sf1	84	86.842	ENSMALG00000020521	sf1	92	89.123	Monopterus_albus
ENSSLDG00000013075	sf1	61	76.636	MGP_CAROLIEiJ_G0022607	Sf1	99	95.113	Mus_caroli
ENSSLDG00000013075	sf1	61	76.636	ENSMUSG00000024949	Sf1	99	95.113	Mus_musculus
ENSSLDG00000013075	sf1	61	76.636	MGP_PahariEiJ_G0014101	Sf1	99	95.113	Mus_pahari
ENSSLDG00000013075	sf1	61	76.636	MGP_SPRETEiJ_G0023518	Sf1	99	95.113	Mus_spretus
ENSSLDG00000013075	sf1	64	73.614	ENSMLUG00000029800	-	65	76.864	Myotis_lucifugus
ENSSLDG00000013075	sf1	61	76.636	ENSNGAG00000005550	Sf1	66	80.463	Nannospalax_galili
ENSSLDG00000013075	sf1	68	87.773	ENSNBRG00000017606	sf1	72	85.119	Neolamprologus_brichardi
ENSSLDG00000013075	sf1	61	76.402	ENSNLEG00000005236	-	91	80.206	Nomascus_leucogenys
ENSSLDG00000013075	sf1	58	77.805	ENSMEUG00000013424	SF1	68	81.402	Notamacropus_eugenii
ENSSLDG00000013075	sf1	60	76.905	ENSOCUG00000026486	SF1	59	80.577	Oryctolagus_cuniculus
ENSSLDG00000013075	sf1	70	88.161	ENSORLG00000011853	sf1	66	89.059	Oryzias_latipes
ENSSLDG00000013075	sf1	70	88.584	ENSORLG00020011834	sf1	66	89.497	Oryzias_latipes_hni
ENSSLDG00000013075	sf1	68	88.720	ENSORLG00015012855	sf1	66	89.059	Oryzias_latipes_hsok
ENSSLDG00000013075	sf1	97	87.897	ENSOMEG00000005210	sf1	67	90.372	Oryzias_melastigma
ENSSLDG00000013075	sf1	61	76.402	ENSOARG00000009166	SF1	66	79.949	Ovis_aries
ENSSLDG00000013075	sf1	60	76.905	ENSPPAG00000002799	-	97	77.053	Pan_paniscus
ENSSLDG00000013075	sf1	59	77.240	ENSPPRG00000013566	SF1	57	81.016	Panthera_pardus
ENSSLDG00000013075	sf1	60	76.777	ENSPTIG00000016141	SF1	67	80.679	Panthera_tigris_altaica
ENSSLDG00000013075	sf1	62	76.606	ENSPTRG00000003846	SF1	91	80.206	Pan_troglodytes
ENSSLDG00000013075	sf1	61	76.402	ENSPANG00000020754	SF1	90	80.206	Papio_anubis
ENSSLDG00000013075	sf1	61	76.636	ENSPEMG00000010463	Sf1	66	80.720	Peromyscus_maniculatus_bairdii
ENSSLDG00000013075	sf1	97	87.595	ENSPFOG00000013683	sf1	62	92.084	Poecilia_formosa
ENSSLDG00000013075	sf1	61	76.402	ENSPPYG00000003098	-	71	79.949	Pongo_abelii
ENSSLDG00000013075	sf1	59	76.998	ENSPCAG00000013631	SF1	75	67.892	Procavia_capensis
ENSSLDG00000013075	sf1	61	76.402	ENSPCOG00000027546	SF1	90	80.000	Propithecus_coquereli
ENSSLDG00000013075	sf1	59	77.240	ENSPVAG00000016938	SF1	75	69.548	Pteropus_vampyrus
ENSSLDG00000013075	sf1	61	76.402	ENSRBIG00000042818	SF1	91	80.206	Rhinopithecus_bieti
ENSSLDG00000013075	sf1	59	77.240	ENSRROG00000045655	SF1	88	81.283	Rhinopithecus_roxellana
ENSSLDG00000013075	sf1	86	60.737	ENSSBOG00000022267	-	76	72.024	Saimiri_boliviensis_boliviensis
ENSSLDG00000013075	sf1	72	70.445	ENSSHAG00000006841	SF1	70	81.984	Sarcophilus_harrisii
ENSSLDG00000013075	sf1	71	80.873	ENSSFOG00015021978	sf1	66	80.525	Scleropages_formosus
ENSSLDG00000013075	sf1	84	91.409	ENSSMAG00000007549	sf1	70	92.810	Scophthalmus_maximus
ENSSLDG00000013075	sf1	90	99.507	ENSSDUG00000003903	sf1	93	99.507	Seriola_dumerili
ENSSLDG00000013075	sf1	59	72.639	ENSSARG00000008180	SF1	71	76.471	Sorex_araneus
ENSSLDG00000013075	sf1	59	79.767	ENSSPUG00000012907	SF1	58	85.915	Sphenodon_punctatus
ENSSLDG00000013075	sf1	61	76.402	ENSSSCG00000013021	SF1	59	80.206	Sus_scrofa
ENSSLDG00000013075	sf1	74	71.243	ENSTNIG00000004820	sf1	62	82.301	Tetraodon_nigroviridis
ENSSLDG00000013075	sf1	59	72.277	ENSTBEG00000013133	SF1	62	65.727	Tupaia_belangeri
ENSSLDG00000013075	sf1	61	76.512	ENSUMAG00000007268	SF1	72	80.260	Ursus_maritimus
ENSSLDG00000013075	sf1	54	94.247	ENSXCOG00000003704	sf1	69	93.132	Xiphophorus_couchianus
ENSSLDG00000013075	sf1	97	88.048	ENSXMAG00000007822	sf1	70	90.153	Xiphophorus_maculatus