EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000013130 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 393 bases
Position: chrPEQF01094913.1:1918-2310
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000016550	MMR_HSR1	PF01926.23	6.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000017147	-	393	-	ENSSLDP00000016550	131 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000013130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000013130	-	79	41.346	ENSSLDG00000005616	-	50	41.346
ENSSLDG00000013130	-	84	52.727	ENSSLDG00000002744	-	51	52.727
ENSSLDG00000013130	-	90	51.786	ENSSLDG00000017256	-	50	51.786
ENSSLDG00000013130	-	90	100.000	ENSSLDG00000009698	-	94	100.000
ENSSLDG00000013130	-	86	53.982	ENSSLDG00000024641	-	57	53.982
ENSSLDG00000013130	-	93	52.459	ENSSLDG00000006517	-	56	52.459
ENSSLDG00000013130	-	85	53.153	ENSSLDG00000011692	-	54	53.153
ENSSLDG00000013130	-	86	51.304	ENSSLDG00000009117	-	57	51.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013130	-	85	51.786	ENSAPOG00000001262	-	53	51.786	Acanthochromis_polyacanthus
ENSSLDG00000013130	-	87	53.509	ENSAPOG00000007361	-	64	53.509	Acanthochromis_polyacanthus
ENSSLDG00000013130	-	85	54.054	ENSACIG00000000976	-	55	54.054	Amphilophus_citrinellus
ENSSLDG00000013130	-	85	53.571	ENSACIG00000008666	-	54	53.571	Amphilophus_citrinellus
ENSSLDG00000013130	-	85	52.679	ENSACIG00000001465	-	67	52.679	Amphilophus_citrinellus
ENSSLDG00000013130	-	88	53.043	ENSAOCG00000011143	-	67	53.043	Amphiprion_ocellaris
ENSSLDG00000013130	-	79	52.885	ENSAOCG00000012536	-	81	52.885	Amphiprion_ocellaris
ENSSLDG00000013130	-	56	52.000	ENSAPEG00000021785	-	86	52.000	Amphiprion_percula
ENSSLDG00000013130	-	84	54.545	ENSAPEG00000018782	-	73	54.545	Amphiprion_percula
ENSSLDG00000013130	-	84	53.636	ENSAPEG00000003102	-	56	53.636	Amphiprion_percula
ENSSLDG00000013130	-	85	53.913	ENSATEG00000014028	-	51	53.913	Anabas_testudineus
ENSSLDG00000013130	-	63	45.556	ENSACLG00000010743	-	82	45.556	Astatotilapia_calliptera
ENSSLDG00000013130	-	85	58.036	ENSACLG00000003287	-	56	58.036	Astatotilapia_calliptera
ENSSLDG00000013130	-	85	55.652	ENSACLG00000017459	-	52	55.652	Astatotilapia_calliptera
ENSSLDG00000013130	-	66	46.154	ENSACLG00000005151	-	84	46.154	Astatotilapia_calliptera
ENSSLDG00000013130	-	92	73.554	ENSACLG00000021980	-	88	73.554	Astatotilapia_calliptera
ENSSLDG00000013130	-	93	45.600	ENSAMXG00000035621	-	50	45.600	Astyanax_mexicanus
ENSSLDG00000013130	-	86	61.062	ENSAMXG00000038694	-	74	61.062	Astyanax_mexicanus
ENSSLDG00000013130	-	89	50.000	ENSAMXG00000038457	-	51	50.000	Astyanax_mexicanus
ENSSLDG00000013130	-	88	40.000	ENSAMXG00000031086	-	52	40.000	Astyanax_mexicanus
ENSSLDG00000013130	-	97	46.212	ENSAMXG00000040298	-	53	46.212	Astyanax_mexicanus
ENSSLDG00000013130	-	86	39.823	ENSAMXG00000036272	-	53	38.739	Astyanax_mexicanus
ENSSLDG00000013130	-	81	50.943	ENSAMXG00000042243	-	50	50.943	Astyanax_mexicanus
ENSSLDG00000013130	-	85	54.464	ENSAMXG00000041888	-	54	54.464	Astyanax_mexicanus
ENSSLDG00000013130	-	86	60.526	ENSAMXG00000002402	-	50	58.678	Astyanax_mexicanus
ENSSLDG00000013130	-	91	55.455	ENSAMXG00000038070	-	54	55.455	Astyanax_mexicanus
ENSSLDG00000013130	-	89	57.759	ENSAMXG00000002562	-	78	57.759	Astyanax_mexicanus
ENSSLDG00000013130	-	92	61.157	ENSAMXG00000029911	-	75	61.157	Astyanax_mexicanus
ENSSLDG00000013130	-	89	56.034	ENSAMXG00000037339	-	79	56.034	Astyanax_mexicanus
ENSSLDG00000013130	-	79	47.115	ENSAMXG00000037755	-	53	47.115	Astyanax_mexicanus
ENSSLDG00000013130	-	84	52.727	ENSCVAG00000019639	-	55	52.727	Cyprinodon_variegatus
ENSSLDG00000013130	-	92	50.413	ENSCVAG00000021672	-	59	50.413	Cyprinodon_variegatus
ENSSLDG00000013130	-	87	60.345	ENSCVAG00000009848	-	58	60.345	Cyprinodon_variegatus
ENSSLDG00000013130	-	86	66.372	ENSCVAG00000017220	-	67	66.372	Cyprinodon_variegatus
ENSSLDG00000013130	-	96	57.812	ENSDARG00000103883	si:ch1073-181h11.2	85	57.812	Danio_rerio
ENSSLDG00000013130	-	92	55.000	ENSDARG00000109228	FO680692.1	57	55.000	Danio_rerio
ENSSLDG00000013130	-	84	58.182	ENSDARG00000078182	zgc:194443	59	61.538	Danio_rerio
ENSSLDG00000013130	-	95	61.062	ENSELUG00000015115	-	54	61.062	Esox_lucius
ENSSLDG00000013130	-	86	60.177	ENSELUG00000015180	-	54	60.177	Esox_lucius
ENSSLDG00000013130	-	89	57.759	ENSELUG00000012454	-	52	57.759	Esox_lucius
ENSSLDG00000013130	-	92	56.198	ENSELUG00000015016	-	53	56.198	Esox_lucius
ENSSLDG00000013130	-	98	62.016	ENSFHEG00000009740	-	64	62.016	Fundulus_heteroclitus
ENSSLDG00000013130	-	85	50.893	ENSFHEG00000009496	-	52	50.893	Fundulus_heteroclitus
ENSSLDG00000013130	-	84	55.455	ENSGMOG00000001269	-	53	55.455	Gadus_morhua
ENSSLDG00000013130	-	79	51.923	ENSGAFG00000000209	-	58	51.923	Gambusia_affinis
ENSSLDG00000013130	-	84	58.182	ENSGAFG00000018273	-	57	58.182	Gambusia_affinis
ENSSLDG00000013130	-	73	48.958	ENSGAFG00000003916	-	81	48.958	Gambusia_affinis
ENSSLDG00000013130	-	91	47.899	ENSGACG00000018283	zgc:113625	52	47.899	Gasterosteus_aculeatus
ENSSLDG00000013130	-	85	54.464	ENSHBUG00000002917	-	57	54.464	Haplochromis_burtoni
ENSSLDG00000013130	-	54	53.425	ENSHBUG00000015901	-	76	53.425	Haplochromis_burtoni
ENSSLDG00000013130	-	85	53.571	ENSHBUG00000017626	-	55	53.571	Haplochromis_burtoni
ENSSLDG00000013130	-	82	52.778	ENSHBUG00000023810	-	70	52.778	Haplochromis_burtoni
ENSSLDG00000013130	-	84	49.138	ENSHBUG00000010422	-	57	49.138	Haplochromis_burtoni
ENSSLDG00000013130	-	85	54.464	ENSHBUG00000005397	-	59	54.464	Haplochromis_burtoni
ENSSLDG00000013130	-	87	50.000	ENSIPUG00000008956	-	53	50.000	Ictalurus_punctatus
ENSSLDG00000013130	-	94	68.293	ENSKMAG00000001775	-	92	68.293	Kryptolebias_marmoratus
ENSSLDG00000013130	-	95	49.194	ENSLBEG00000011881	-	73	49.194	Labrus_bergylta
ENSSLDG00000013130	-	94	47.154	ENSLBEG00000014991	-	50	47.154	Labrus_bergylta
ENSSLDG00000013130	-	99	57.143	ENSLOCG00000011925	-	57	57.143	Lepisosteus_oculatus
ENSSLDG00000013130	-	96	55.455	ENSLOCG00000000257	-	56	55.455	Lepisosteus_oculatus
ENSSLDG00000013130	-	85	54.545	ENSLOCG00000011883	-	59	54.545	Lepisosteus_oculatus
ENSSLDG00000013130	-	83	54.128	ENSLOCG00000017851	-	55	54.128	Lepisosteus_oculatus
ENSSLDG00000013130	-	90	47.059	ENSMZEG00005012843	zgc:113625	51	47.059	Maylandia_zebra
ENSSLDG00000013130	-	68	43.617	ENSMZEG00005002838	-	81	43.617	Maylandia_zebra
ENSSLDG00000013130	-	87	46.491	ENSMZEG00005013350	-	55	46.491	Maylandia_zebra
ENSSLDG00000013130	-	90	74.576	ENSMZEG00005006466	-	74	73.554	Maylandia_zebra
ENSSLDG00000013130	-	94	46.774	ENSMZEG00005012880	-	50	46.774	Maylandia_zebra
ENSSLDG00000013130	-	91	47.934	ENSMZEG00005015507	-	50	47.934	Maylandia_zebra
ENSSLDG00000013130	-	87	50.000	ENSMZEG00005006491	-	58	50.000	Maylandia_zebra
ENSSLDG00000013130	-	85	51.786	ENSMZEG00005020549	-	72	51.786	Maylandia_zebra
ENSSLDG00000013130	-	85	62.500	ENSMMOG00000021432	-	57	62.500	Mola_mola
ENSSLDG00000013130	-	95	74.194	ENSMALG00000005969	-	61	74.194	Monopterus_albus
ENSSLDG00000013130	-	95	44.355	ENSNBRG00000003521	-	54	44.355	Neolamprologus_brichardi
ENSSLDG00000013130	-	85	58.065	ENSNBRG00000020282	-	51	58.065	Neolamprologus_brichardi
ENSSLDG00000013130	-	79	44.340	ENSNBRG00000003572	-	51	44.340	Neolamprologus_brichardi
ENSSLDG00000013130	-	72	51.064	ENSNBRG00000024164	-	72	51.064	Neolamprologus_brichardi
ENSSLDG00000013130	-	91	51.351	ENSONIG00000021012	-	53	51.351	Oreochromis_niloticus
ENSSLDG00000013130	-	86	62.500	ENSONIG00000016464	-	60	62.500	Oreochromis_niloticus
ENSSLDG00000013130	-	85	51.786	ENSONIG00000016493	-	50	51.786	Oreochromis_niloticus
ENSSLDG00000013130	-	85	53.571	ENSONIG00000017854	-	61	53.571	Oreochromis_niloticus
ENSSLDG00000013130	-	91	48.760	ENSONIG00000011627	-	54	54.237	Oreochromis_niloticus
ENSSLDG00000013130	-	89	57.143	ENSONIG00000020703	-	53	57.143	Oreochromis_niloticus
ENSSLDG00000013130	-	85	51.351	ENSONIG00000018006	-	54	51.351	Oreochromis_niloticus
ENSSLDG00000013130	-	89	52.586	ENSONIG00000005035	-	52	53.153	Oreochromis_niloticus
ENSSLDG00000013130	-	91	49.550	ENSONIG00000013606	-	51	49.550	Oreochromis_niloticus
ENSSLDG00000013130	-	84	52.727	ENSPKIG00000014114	-	53	52.727	Paramormyrops_kingsleyae
ENSSLDG00000013130	-	96	44.882	ENSPKIG00000017979	-	76	44.882	Paramormyrops_kingsleyae
ENSSLDG00000013130	-	85	42.342	ENSPKIG00000018032	-	50	44.144	Paramormyrops_kingsleyae
ENSSLDG00000013130	-	85	62.500	ENSPMGG00000013352	-	54	62.500	Periophthalmus_magnuspinnatus
ENSSLDG00000013130	-	85	45.946	ENSPFOG00000001141	-	57	45.946	Poecilia_formosa
ENSSLDG00000013130	-	89	51.282	ENSPFOG00000004363	-	51	51.282	Poecilia_formosa
ENSSLDG00000013130	-	95	68.548	ENSPLAG00000017588	-	73	68.548	Poecilia_latipinna
ENSSLDG00000013130	-	85	62.162	ENSPLAG00000017599	-	83	59.200	Poecilia_latipinna
ENSSLDG00000013130	-	85	48.214	ENSPLAG00000010124	-	57	48.214	Poecilia_latipinna
ENSSLDG00000013130	-	100	62.595	ENSPLAG00000017577	-	50	62.595	Poecilia_latipinna
ENSSLDG00000013130	-	95	68.548	ENSPMEG00000019918	-	73	68.548	Poecilia_mexicana
ENSSLDG00000013130	-	84	53.636	ENSPMEG00000010870	-	51	53.636	Poecilia_mexicana
ENSSLDG00000013130	-	99	41.844	ENSPREG00000003668	-	51	41.844	Poecilia_reticulata
ENSSLDG00000013130	-	83	48.624	ENSPREG00000008831	-	54	48.624	Poecilia_reticulata
ENSSLDG00000013130	-	91	51.695	ENSPREG00000005846	-	53	51.695	Poecilia_reticulata
ENSSLDG00000013130	-	82	50.000	ENSPREG00000006000	-	59	50.000	Poecilia_reticulata
ENSSLDG00000013130	-	100	58.015	ENSPNYG00000004876	-	65	58.015	Pundamilia_nyererei
ENSSLDG00000013130	-	85	49.107	ENSPNYG00000013475	-	52	49.107	Pundamilia_nyererei
ENSSLDG00000013130	-	87	54.386	ENSPNYG00000004891	-	54	54.386	Pundamilia_nyererei
ENSSLDG00000013130	-	84	50.000	ENSPNYG00000005037	-	61	50.000	Pundamilia_nyererei
ENSSLDG00000013130	-	85	58.929	ENSPNAG00000014125	-	63	58.929	Pygocentrus_nattereri
ENSSLDG00000013130	-	86	53.982	ENSPNAG00000015718	-	72	53.982	Pygocentrus_nattereri
ENSSLDG00000013130	-	85	59.821	ENSPNAG00000014098	-	78	59.821	Pygocentrus_nattereri
ENSSLDG00000013130	-	99	51.538	ENSSFOG00015005185	-	66	51.538	Scleropages_formosus
ENSSLDG00000013130	-	89	56.410	ENSSFOG00015001400	-	61	56.410	Scleropages_formosus
ENSSLDG00000013130	-	85	56.250	ENSSFOG00015006012	-	56	56.250	Scleropages_formosus
ENSSLDG00000013130	-	92	50.000	ENSSFOG00015005954	-	58	50.000	Scleropages_formosus
ENSSLDG00000013130	-	89	52.137	ENSSDUG00000004552	-	50	52.137	Seriola_dumerili
ENSSLDG00000013130	-	82	51.402	ENSSDUG00000018996	-	50	51.402	Seriola_dumerili
ENSSLDG00000013130	-	69	52.222	ENSSDUG00000021711	-	59	52.222	Seriola_dumerili
ENSSLDG00000013130	-	69	45.556	ENSSDUG00000019892	-	55	50.847	Seriola_dumerili
ENSSLDG00000013130	-	94	69.919	ENSSPAG00000015600	-	69	69.919	Stegastes_partitus
ENSSLDG00000013130	-	84	47.788	ENSSPAG00000005792	-	52	47.788	Stegastes_partitus
ENSSLDG00000013130	-	92	71.074	ENSSPAG00000015591	-	75	71.074	Stegastes_partitus
ENSSLDG00000013130	-	84	50.000	ENSXCOG00000016291	-	51	50.000	Xiphophorus_couchianus
ENSSLDG00000013130	-	88	70.690	ENSXCOG00000014519	-	80	70.690	Xiphophorus_couchianus
ENSSLDG00000013130	-	88	56.522	ENSXCOG00000018333	-	78	56.522	Xiphophorus_couchianus
ENSSLDG00000013130	-	85	58.559	ENSXMAG00000026760	-	60	58.559	Xiphophorus_maculatus