EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000013562 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:101606
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6647 bases
Position: chrPEQF01099225.1:51566-58212
Accession: 111668542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017164	zf-C2H2	PF00096.26	2.9e-12	1	2
ENSSLDP00000017164	zf-C2H2	PF00096.26	2.9e-12	2	2
ENSSLDP00000017164	zf-met	PF12874.7	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000017770	-	1050	XM_023424599	ENSSLDP00000017164	349 (aa)	XP_023280367	-

Gene Model

Click here to download ENSSLDG00000013562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000013562	-	72	42.105	ENSSLDG00000013353	prdm5	96	42.105
ENSSLDG00000013562	-	100	76.501	ENSSLDG00000009557	prdm12b	100	76.501
ENSSLDG00000013562	-	64	38.934	ENSSLDG00000006506	prdm14	50	38.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013562	-	93	84.049	ENSG00000130711	PRDM12	99	77.507	Homo_sapiens
ENSSLDG00000013562	-	100	76.166	ENSAPOG00000016051	prdm12b	100	76.425	Acanthochromis_polyacanthus
ENSSLDG00000013562	-	100	73.003	ENSAPOG00000018234	-	100	72.727	Acanthochromis_polyacanthus
ENSSLDG00000013562	-	93	83.077	ENSAMEG00000016234	PRDM12	99	83.077	Ailuropoda_melanoleuca
ENSSLDG00000013562	-	100	83.905	ENSACIG00000005193	-	100	83.905	Amphilophus_citrinellus
ENSSLDG00000013562	-	100	77.128	ENSACIG00000019578	prdm12b	100	77.660	Amphilophus_citrinellus
ENSSLDG00000013562	-	100	76.517	ENSAOCG00000015040	prdm12b	100	76.781	Amphiprion_ocellaris
ENSSLDG00000013562	-	100	77.394	ENSAPEG00000015092	prdm12b	100	77.660	Amphiprion_percula
ENSSLDG00000013562	-	100	79.688	ENSAPEG00000022849	-	99	79.427	Amphiprion_percula
ENSSLDG00000013562	-	93	92.355	ENSATEG00000014595	-	96	92.355	Anabas_testudineus
ENSSLDG00000013562	-	93	84.049	ENSANAG00000020616	PRDM12	95	84.049	Aotus_nancymaae
ENSSLDG00000013562	-	100	80.000	ENSACLG00000011876	prdm12b	100	80.000	Astatotilapia_calliptera
ENSSLDG00000013562	-	100	83.038	ENSACLG00000007631	-	100	83.038	Astatotilapia_calliptera
ENSSLDG00000013562	-	100	80.593	ENSAMXG00000033665	prdm12b	100	81.402	Astyanax_mexicanus
ENSSLDG00000013562	-	100	80.886	ENSAMXG00000008540	PRDM12	100	80.609	Astyanax_mexicanus
ENSSLDG00000013562	-	93	84.356	ENSBTAG00000023797	PRDM12	99	79.063	Bos_taurus
ENSSLDG00000013562	-	93	84.049	ENSCJAG00000020540	PRDM12	99	79.006	Callithrix_jacchus
ENSSLDG00000013562	-	81	86.219	ENSCAFG00000023076	PRDM12	99	79.257	Canis_familiaris
ENSSLDG00000013562	-	93	84.356	ENSCAFG00020024046	PRDM12	99	78.415	Canis_lupus_dingo
ENSSLDG00000013562	-	93	84.356	ENSCHIG00000025005	PRDM12	99	78.846	Capra_hircus
ENSSLDG00000013562	-	90	83.758	ENSCPOG00000005901	PRDM12	95	83.439	Cavia_porcellus
ENSSLDG00000013562	-	93	84.049	ENSCCAG00000037485	PRDM12	99	78.356	Cebus_capucinus
ENSSLDG00000013562	-	93	84.049	ENSCATG00000020327	PRDM12	99	78.356	Cercocebus_atys
ENSSLDG00000013562	-	96	82.196	ENSCLAG00000005499	PRDM12	91	81.899	Chinchilla_lanigera
ENSSLDG00000013562	-	93	84.049	ENSCSAG00000014756	PRDM12	99	78.142	Chlorocebus_sabaeus
ENSSLDG00000013562	-	100	82.303	ENSCPBG00000022628	PRDM12	99	82.303	Chrysemys_picta_bellii
ENSSLDG00000013562	-	93	84.356	ENSCGRG00001015005	Prdm12	99	77.717	Cricetulus_griseus_chok1gshd
ENSSLDG00000013562	-	100	77.419	ENSCVAG00000017166	prdm12b	100	77.957	Cyprinodon_variegatus
ENSSLDG00000013562	-	100	79.540	ENSCVAG00000000944	-	100	79.540	Cyprinodon_variegatus
ENSSLDG00000013562	-	100	81.199	ENSDARG00000007430	prdm12b	100	81.199	Danio_rerio
ENSSLDG00000013562	-	93	83.792	ENSDNOG00000042302	PRDM12	99	78.571	Dasypus_novemcinctus
ENSSLDG00000013562	-	89	64.201	ENSEBUG00000016780	prdm12b	75	65.396	Eptatretus_burgeri
ENSSLDG00000013562	-	97	81.818	ENSEASG00005008472	PRDM12	99	78.788	Equus_asinus_asinus
ENSSLDG00000013562	-	97	81.818	ENSECAG00000005933	PRDM12	99	78.788	Equus_caballus
ENSSLDG00000013562	-	100	78.177	ENSELUG00000013674	PRDM12	99	78.177	Esox_lucius
ENSSLDG00000013562	-	100	78.706	ENSELUG00000009905	prdm12b	100	78.706	Esox_lucius
ENSSLDG00000013562	-	93	84.356	ENSFCAG00000043086	PRDM12	99	78.630	Felis_catus
ENSSLDG00000013562	-	100	83.662	ENSFALG00000001445	PRDM12	89	83.662	Ficedula_albicollis
ENSSLDG00000013562	-	100	77.600	ENSFHEG00000003944	prdm12b	100	77.867	Fundulus_heteroclitus
ENSSLDG00000013562	-	100	83.204	ENSFHEG00000007746	-	100	82.429	Fundulus_heteroclitus
ENSSLDG00000013562	-	93	84.356	ENSGMOG00000011797	prdm12b	99	79.832	Gadus_morhua
ENSSLDG00000013562	-	100	83.662	ENSGALG00000003895	PRDM12	99	83.662	Gallus_gallus
ENSSLDG00000013562	-	100	77.333	ENSGAFG00000010827	prdm12b	99	77.600	Gambusia_affinis
ENSSLDG00000013562	-	100	78.495	ENSGACG00000016713	prdm12b	99	78.495	Gasterosteus_aculeatus
ENSSLDG00000013562	-	100	82.303	ENSGAGG00000014083	PRDM12	99	82.303	Gopherus_agassizii
ENSSLDG00000013562	-	93	83.742	ENSGGOG00000010568	PRDM12	99	77.446	Gorilla_gorilla
ENSSLDG00000013562	-	100	83.038	ENSHBUG00000022537	-	93	83.038	Haplochromis_burtoni
ENSSLDG00000013562	-	100	77.807	ENSHBUG00000022878	prdm12b	100	78.075	Haplochromis_burtoni
ENSSLDG00000013562	-	93	84.356	ENSHGLG00000013939	PRDM12	99	77.596	Heterocephalus_glaber_female
ENSSLDG00000013562	-	100	78.771	ENSHCOG00000021167	-	100	78.492	Hippocampus_comes
ENSSLDG00000013562	-	93	79.532	ENSHCOG00000003663	prdm12b	100	72.194	Hippocampus_comes
ENSSLDG00000013562	-	100	81.030	ENSIPUG00000017053	prdm12b	100	80.759	Ictalurus_punctatus
ENSSLDG00000013562	-	100	77.747	ENSIPUG00000019544	PRDM12	100	77.747	Ictalurus_punctatus
ENSSLDG00000013562	-	93	84.356	ENSSTOG00000005986	PRDM12	85	84.049	Ictidomys_tridecemlineatus
ENSSLDG00000013562	-	93	84.356	ENSJJAG00000005424	Prdm12	98	84.049	Jaculus_jaculus
ENSSLDG00000013562	-	94	91.916	ENSKMAG00000021205	-	96	89.766	Kryptolebias_marmoratus
ENSSLDG00000013562	-	100	70.690	ENSKMAG00000016921	prdm12b	100	70.936	Kryptolebias_marmoratus
ENSSLDG00000013562	-	100	77.836	ENSLBEG00000017769	prdm12b	100	77.836	Labrus_bergylta
ENSSLDG00000013562	-	100	85.263	ENSLBEG00000007776	-	100	86.579	Labrus_bergylta
ENSSLDG00000013562	-	100	82.865	ENSLACG00000017560	PRDM12	99	82.865	Latimeria_chalumnae
ENSSLDG00000013562	-	100	80.220	ENSLOCG00000005429	prdm12b	99	81.044	Lepisosteus_oculatus
ENSSLDG00000013562	-	93	82.477	ENSLAFG00000006979	PRDM12	88	82.477	Loxodonta_africana
ENSSLDG00000013562	-	93	84.049	ENSMFAG00000040322	PRDM12	99	77.778	Macaca_fascicularis
ENSSLDG00000013562	-	93	84.049	ENSMNEG00000037234	PRDM12	99	78.356	Macaca_nemestrina
ENSSLDG00000013562	-	100	83.548	ENSMAMG00000018988	-	100	83.805	Mastacembelus_armatus
ENSSLDG00000013562	-	100	77.660	ENSMAMG00000013212	prdm12b	100	77.926	Mastacembelus_armatus
ENSSLDG00000013562	-	100	82.620	ENSMZEG00005000415	PRDM12	100	82.620	Maylandia_zebra
ENSSLDG00000013562	-	98	83.381	ENSMGAG00000005438	PRDM12	98	83.381	Meleagris_gallopavo
ENSSLDG00000013562	-	100	78.202	ENSMAUG00000013040	Prdm12	99	77.929	Mesocricetus_auratus
ENSSLDG00000013562	-	93	84.356	ENSMICG00000015480	PRDM12	99	78.788	Microcebus_murinus
ENSSLDG00000013562	-	98	81.143	ENSMOCG00000021026	Prdm12	89	84.356	Microtus_ochrogaster
ENSSLDG00000013562	-	100	82.353	ENSMODG00000012108	PRDM12	99	82.353	Monodelphis_domestica
ENSSLDG00000013562	-	83	76.038	ENSMALG00000021901	prdm12b	96	76.038	Monopterus_albus
ENSSLDG00000013562	-	93	84.356	MGP_CAROLIEiJ_G0023414	Prdm12	99	77.596	Mus_caroli
ENSSLDG00000013562	-	93	84.356	ENSMUSG00000079466	Prdm12	99	77.596	Mus_musculus
ENSSLDG00000013562	-	93	84.356	MGP_PahariEiJ_G0024871	Prdm12	99	77.596	Mus_pahari
ENSSLDG00000013562	-	93	84.356	MGP_SPRETEiJ_G0024331	Prdm12	99	77.596	Mus_spretus
ENSSLDG00000013562	-	93	84.356	ENSNGAG00000018480	Prdm12	99	80.170	Nannospalax_galili
ENSSLDG00000013562	-	100	76.923	ENSNBRG00000006727	prdm12b	100	77.454	Neolamprologus_brichardi
ENSSLDG00000013562	-	100	84.444	ENSNBRG00000024312	-	100	84.444	Neolamprologus_brichardi
ENSSLDG00000013562	-	100	73.950	ENSMEUG00000003828	PRDM12	99	73.950	Notamacropus_eugenii
ENSSLDG00000013562	-	93	83.742	ENSOPRG00000008680	PRDM12	98	83.742	Ochotona_princeps
ENSSLDG00000013562	-	93	84.663	ENSODEG00000016282	PRDM12	61	84.356	Octodon_degus
ENSSLDG00000013562	-	61	82.192	ENSOANG00000001043	PRDM12	100	82.192	Ornithorhynchus_anatinus
ENSSLDG00000013562	-	86	84.615	ENSOCUG00000008241	PRDM12	96	84.615	Oryctolagus_cuniculus
ENSSLDG00000013562	-	100	81.586	ENSORLG00000017558	-	100	81.330	Oryzias_latipes
ENSSLDG00000013562	-	100	76.903	ENSORLG00000007114	prdm12b	99	76.903	Oryzias_latipes
ENSSLDG00000013562	-	100	76.501	ENSORLG00020019565	prdm12b	99	76.440	Oryzias_latipes_hni
ENSSLDG00000013562	-	100	81.378	ENSORLG00020013167	-	100	80.867	Oryzias_latipes_hni
ENSSLDG00000013562	-	100	81.586	ENSORLG00015003435	-	100	81.330	Oryzias_latipes_hsok
ENSSLDG00000013562	-	100	76.640	ENSORLG00015007621	prdm12b	99	76.842	Oryzias_latipes_hsok
ENSSLDG00000013562	-	100	76.104	ENSOMEG00000004134	prdm12b	99	76.042	Oryzias_melastigma
ENSSLDG00000013562	-	100	85.333	ENSOMEG00000007762	-	100	84.533	Oryzias_melastigma
ENSSLDG00000013562	-	93	84.356	ENSOGAG00000007557	PRDM12	97	84.356	Otolemur_garnettii
ENSSLDG00000013562	-	84	80.272	ENSPPAG00000031506	-	99	79.932	Pan_paniscus
ENSSLDG00000013562	-	100	73.407	ENSPPRG00000023024	PRDM12	92	73.407	Panthera_pardus
ENSSLDG00000013562	-	93	84.049	ENSPTRG00000021475	PRDM12	99	77.717	Pan_troglodytes
ENSSLDG00000013562	-	93	84.049	ENSPTRG00000043324	-	99	77.717	Pan_troglodytes
ENSSLDG00000013562	-	93	84.049	ENSPANG00000025967	PRDM12	99	78.356	Papio_anubis
ENSSLDG00000013562	-	100	80.161	ENSPKIG00000007228	prdm12b	100	80.429	Paramormyrops_kingsleyae
ENSSLDG00000013562	-	93	79.635	ENSPKIG00000004305	PRDM12	94	79.635	Paramormyrops_kingsleyae
ENSSLDG00000013562	-	100	81.742	ENSPSIG00000006739	PRDM12	99	81.461	Pelodiscus_sinensis
ENSSLDG00000013562	-	100	77.507	ENSPMGG00000008867	prdm12b	99	78.049	Periophthalmus_magnuspinnatus
ENSSLDG00000013562	-	100	79.688	ENSPMGG00000002356	-	100	80.729	Periophthalmus_magnuspinnatus
ENSSLDG00000013562	-	93	84.356	ENSPEMG00000009969	Prdm12	89	84.049	Peromyscus_maniculatus_bairdii
ENSSLDG00000013562	-	100	82.633	ENSPCIG00000024119	PRDM12	99	82.633	Phascolarctos_cinereus
ENSSLDG00000013562	-	100	78.649	ENSPFOG00000019841	prdm12b	100	78.649	Poecilia_formosa
ENSSLDG00000013562	-	100	76.455	ENSPLAG00000016626	prdm12b	99	76.455	Poecilia_latipinna
ENSSLDG00000013562	-	96	76.438	ENSPMEG00000016698	prdm12b	99	76.712	Poecilia_mexicana
ENSSLDG00000013562	-	97	82.571	ENSPREG00000003211	-	96	81.429	Poecilia_reticulata
ENSSLDG00000013562	-	100	76.253	ENSPREG00000015073	prdm12b	99	76.517	Poecilia_reticulata
ENSSLDG00000013562	-	93	84.049	ENSPPYG00000019694	PRDM12	92	84.049	Pongo_abelii
ENSSLDG00000013562	-	93	84.356	ENSPCOG00000022255	PRDM12	99	78.261	Propithecus_coquereli
ENSSLDG00000013562	-	93	84.356	ENSPVAG00000001511	PRDM12	99	77.989	Pteropus_vampyrus
ENSSLDG00000013562	-	100	82.620	ENSPNYG00000013589	-	100	82.620	Pundamilia_nyererei
ENSSLDG00000013562	-	100	77.394	ENSPNYG00000009607	prdm12b	100	77.394	Pundamilia_nyererei
ENSSLDG00000013562	-	100	81.572	ENSPNAG00000024532	prdm12b	100	81.843	Pygocentrus_nattereri
ENSSLDG00000013562	-	100	76.127	ENSPNAG00000013396	PRDM12	100	78.284	Pygocentrus_nattereri
ENSSLDG00000013562	-	93	84.356	ENSRNOG00000009218	Prdm12	99	77.596	Rattus_norvegicus
ENSSLDG00000013562	-	91	83.648	ENSRBIG00000042712	PRDM12	88	82.919	Rhinopithecus_bieti
ENSSLDG00000013562	-	92	83.851	ENSRROG00000043554	PRDM12	99	83.851	Rhinopithecus_roxellana
ENSSLDG00000013562	-	100	82.123	ENSSHAG00000015972	PRDM12	99	82.123	Sarcophilus_harrisii
ENSSLDG00000013562	-	100	74.425	ENSSMAG00000003754	prdm12b	100	74.936	Scophthalmus_maximus
ENSSLDG00000013562	-	100	75.718	ENSSDUG00000023498	prdm12b	100	75.979	Seriola_dumerili
ENSSLDG00000013562	-	97	94.985	ENSSDUG00000019071	-	94	94.985	Seriola_dumerili
ENSSLDG00000013562	-	100	82.584	ENSSPUG00000013424	PRDM12	99	82.584	Sphenodon_punctatus
ENSSLDG00000013562	-	100	76.596	ENSSPAG00000022420	-	100	76.344	Stegastes_partitus
ENSSLDG00000013562	-	100	76.378	ENSSPAG00000018824	prdm12b	100	76.842	Stegastes_partitus
ENSSLDG00000013562	-	93	84.356	ENSSSCG00000005703	PRDM12	99	78.415	Sus_scrofa
ENSSLDG00000013562	-	100	78.378	ENSTRUG00000018659	prdm12b	100	78.649	Takifugu_rubripes
ENSSLDG00000013562	-	100	84.637	ENSTRUG00000013239	-	100	84.078	Takifugu_rubripes
ENSSLDG00000013562	-	100	83.193	ENSTNIG00000005859	-	99	83.051	Tetraodon_nigroviridis
ENSSLDG00000013562	-	100	78.919	ENSTNIG00000009020	prdm12b	99	79.189	Tetraodon_nigroviridis
ENSSLDG00000013562	-	93	84.356	ENSUAMG00000009653	PRDM12	96	79.943	Ursus_americanus
ENSSLDG00000013562	-	93	84.356	ENSVVUG00000027662	PRDM12	77	84.356	Vulpes_vulpes
ENSSLDG00000013562	-	100	77.480	ENSXCOG00000002836	prdm12b	99	77.748	Xiphophorus_couchianus
ENSSLDG00000013562	-	100	77.128	ENSXMAG00000005537	prdm12b	100	77.394	Xiphophorus_maculatus
ENSSLDG00000013562	-	100	81.137	ENSXMAG00000028012	-	100	80.620	Xiphophorus_maculatus