EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000013565 (Gene tree)
Gene ID: -
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9283 bases
Position: chrPEQF01099033.1:325103-334385
Accession: 111661971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017150	zf-C2H2	PF00096.26	1.3e-24	1	4
ENSSLDP00000017150	zf-C2H2	PF00096.26	1.3e-24	2	4
ENSSLDP00000017150	zf-C2H2	PF00096.26	1.3e-24	3	4
ENSSLDP00000017150	zf-C2H2	PF00096.26	1.3e-24	4	4
ENSSLDP00000017150	zf-met	PF12874.7	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000017756	-	5680	XM_023415692	ENSSLDP00000017150	319 (aa)	XP_023271460	UPI000BBF38A0

Gene Model

Click here to download ENSSLDG00000013565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000013565	scrt2	58	36.364	ENSSLDG00000021278	-	63	36.364
ENSSLDG00000013565	scrt2	56	45.333	ENSSLDG00000012821	znf236	54	45.333
ENSSLDG00000013565	scrt2	58	35.664	ENSSLDG00000000457	-	67	35.664
ENSSLDG00000013565	scrt2	77	36.134	ENSSLDG00000020655	-	53	38.636
ENSSLDG00000013565	scrt2	50	47.368	ENSSLDG00000001860	-	85	47.368
ENSSLDG00000013565	scrt2	59	38.028	ENSSLDG00000015116	-	65	37.000
ENSSLDG00000013565	scrt2	97	59.688	ENSSLDG00000016454	-	97	59.688
ENSSLDG00000013565	scrt2	73	36.029	ENSSLDG00000013353	prdm5	67	36.735
ENSSLDG00000013565	scrt2	76	37.736	ENSSLDG00000013760	-	92	38.129
ENSSLDG00000013565	scrt2	54	45.098	ENSSLDG00000007756	-	86	45.098
ENSSLDG00000013565	scrt2	73	33.566	ENSSLDG00000006288	-	92	38.462
ENSSLDG00000013565	scrt2	58	38.636	ENSSLDG00000016317	-	82	41.007
ENSSLDG00000013565	scrt2	72	38.235	ENSSLDG00000005850	-	90	40.152
ENSSLDG00000013565	scrt2	55	40.323	ENSSLDG00000012320	-	99	42.697
ENSSLDG00000013565	scrt2	51	35.526	ENSSLDG00000000202	-	63	41.558
ENSSLDG00000013565	scrt2	50	39.815	ENSSLDG00000013170	zbtb17	69	39.241
ENSSLDG00000013565	scrt2	63	41.892	ENSSLDG00000017937	-	98	41.892
ENSSLDG00000013565	scrt2	53	43.750	ENSSLDG00000020727	-	98	43.750
ENSSLDG00000013565	scrt2	59	37.179	ENSSLDG00000017718	zbtb48	57	37.179
ENSSLDG00000013565	scrt2	64	30.508	ENSSLDG00000018033	-	51	30.508
ENSSLDG00000013565	scrt2	95	35.417	ENSSLDG00000020163	gfi1ab	99	35.417
ENSSLDG00000013565	scrt2	52	34.848	ENSSLDG00000000859	-	85	34.884
ENSSLDG00000013565	scrt2	70	42.060	ENSSLDG00000012852	snai2	61	56.757
ENSSLDG00000013565	scrt2	66	35.507	ENSSLDG00000020675	-	86	48.649
ENSSLDG00000013565	scrt2	59	41.558	ENSSLDG00000018598	-	92	41.558
ENSSLDG00000013565	scrt2	97	64.725	ENSSLDG00000017166	scrt1b	96	64.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013565	scrt2	97	60.383	ENSAPOG00000015197	-	97	60.383	Acanthochromis_polyacanthus
ENSSLDG00000013565	scrt2	100	98.746	ENSAPOG00000003680	scrt2	100	98.746	Acanthochromis_polyacanthus
ENSSLDG00000013565	scrt2	97	64.725	ENSAPOG00000009279	scrt1b	96	64.725	Acanthochromis_polyacanthus
ENSSLDG00000013565	scrt2	100	84.953	ENSACIG00000012604	scrt2	100	84.953	Amphilophus_citrinellus
ENSSLDG00000013565	scrt2	100	63.272	ENSACIG00000001296	-	100	64.000	Amphilophus_citrinellus
ENSSLDG00000013565	scrt2	97	62.460	ENSACIG00000013613	scrt1b	96	61.981	Amphilophus_citrinellus
ENSSLDG00000013565	scrt2	97	60.000	ENSACIG00000006586	-	97	60.000	Amphilophus_citrinellus
ENSSLDG00000013565	scrt2	97	59.375	ENSAOCG00000023304	-	97	59.375	Amphiprion_ocellaris
ENSSLDG00000013565	scrt2	100	98.746	ENSAOCG00000021557	scrt2	100	98.746	Amphiprion_ocellaris
ENSSLDG00000013565	scrt2	97	64.725	ENSAOCG00000003910	scrt1b	96	64.725	Amphiprion_ocellaris
ENSSLDG00000013565	scrt2	97	59.375	ENSAPEG00000005677	-	97	59.375	Amphiprion_percula
ENSSLDG00000013565	scrt2	97	64.725	ENSAPEG00000000869	scrt1b	96	64.725	Amphiprion_percula
ENSSLDG00000013565	scrt2	100	98.746	ENSAPEG00000022558	scrt2	100	98.746	Amphiprion_percula
ENSSLDG00000013565	scrt2	97	60.772	ENSATEG00000011660	-	97	60.772	Anabas_testudineus
ENSSLDG00000013565	scrt2	100	63.030	ENSATEG00000003195	-	100	63.030	Anabas_testudineus
ENSSLDG00000013565	scrt2	97	65.696	ENSATEG00000002302	scrt1b	96	65.049	Anabas_testudineus
ENSSLDG00000013565	scrt2	100	95.925	ENSATEG00000023998	scrt2	100	95.925	Anabas_testudineus
ENSSLDG00000013565	scrt2	74	69.362	ENSACAG00000016109	SCRT2	95	69.362	Anolis_carolinensis
ENSSLDG00000013565	scrt2	97	59.259	ENSACLG00000012046	-	97	59.259	Astatotilapia_calliptera
ENSSLDG00000013565	scrt2	97	64.401	ENSACLG00000007162	scrt1b	96	64.401	Astatotilapia_calliptera
ENSSLDG00000013565	scrt2	97	66.343	ENSAMXG00000038085	scrt1a	97	65.696	Astyanax_mexicanus
ENSSLDG00000013565	scrt2	97	64.309	ENSAMXG00000042624	SCRT1	98	64.309	Astyanax_mexicanus
ENSSLDG00000013565	scrt2	89	77.895	ENSAMXG00000034158	scrt2	97	77.193	Astyanax_mexicanus
ENSSLDG00000013565	scrt2	56	56.111	WBGene00000468	ces-1	50	66.912	Caenorhabditis_elegans
ENSSLDG00000013565	scrt2	88	60.357	ENSCPBG00000027613	SCRT2	100	60.714	Chrysemys_picta_bellii
ENSSLDG00000013565	scrt2	97	64.839	ENSCPBG00000018899	SCRT1	97	64.516	Chrysemys_picta_bellii
ENSSLDG00000013565	scrt2	100	93.103	ENSCSEG00000021542	scrt2	100	93.103	Cynoglossus_semilaevis
ENSSLDG00000013565	scrt2	97	64.401	ENSCSEG00000008596	scrt1b	96	64.401	Cynoglossus_semilaevis
ENSSLDG00000013565	scrt2	97	58.696	ENSCSEG00000014892	-	97	59.317	Cynoglossus_semilaevis
ENSSLDG00000013565	scrt2	99	59.574	ENSCVAG00000003190	-	100	59.574	Cyprinodon_variegatus
ENSSLDG00000013565	scrt2	100	95.925	ENSCVAG00000021038	scrt2	100	95.925	Cyprinodon_variegatus
ENSSLDG00000013565	scrt2	97	65.049	ENSCVAG00000009561	scrt1b	96	64.401	Cyprinodon_variegatus
ENSSLDG00000013565	scrt2	97	66.019	ENSDARG00000040214	scrt1b	97	65.696	Danio_rerio
ENSSLDG00000013565	scrt2	97	65.049	ENSDARG00000100821	scrt1a	97	65.049	Danio_rerio
ENSSLDG00000013565	scrt2	97	65.909	ENSELUG00000022228	scrt1a	96	65.909	Esox_lucius
ENSSLDG00000013565	scrt2	100	87.117	ENSELUG00000023883	scrt2	100	88.344	Esox_lucius
ENSSLDG00000013565	scrt2	97	66.343	ENSELUG00000005435	scrt1b	96	66.343	Esox_lucius
ENSSLDG00000013565	scrt2	80	63.035	ENSFALG00000005718	SCRT2	97	66.926	Ficedula_albicollis
ENSSLDG00000013565	scrt2	100	86.207	ENSFHEG00000005732	scrt2	100	86.207	Fundulus_heteroclitus
ENSSLDG00000013565	scrt2	97	64.078	ENSFHEG00000014820	scrt1b	96	63.578	Fundulus_heteroclitus
ENSSLDG00000013565	scrt2	97	59.688	ENSFHEG00000009794	-	97	60.312	Fundulus_heteroclitus
ENSSLDG00000013565	scrt2	99	80.243	ENSGMOG00000019519	scrt2	99	80.243	Gadus_morhua
ENSSLDG00000013565	scrt2	96	64.610	ENSGMOG00000000629	scrt1b	96	64.610	Gadus_morhua
ENSSLDG00000013565	scrt2	97	58.576	ENSGALG00000028912	SCRT2	97	59.871	Gallus_gallus
ENSSLDG00000013565	scrt2	97	65.049	ENSGAFG00000007636	scrt1b	96	64.401	Gambusia_affinis
ENSSLDG00000013565	scrt2	100	89.969	ENSGAFG00000003093	scrt2	100	89.969	Gambusia_affinis
ENSSLDG00000013565	scrt2	99	58.750	ENSGAFG00000009650	-	100	59.375	Gambusia_affinis
ENSSLDG00000013565	scrt2	97	59.190	ENSGACG00000004072	-	97	59.627	Gasterosteus_aculeatus
ENSSLDG00000013565	scrt2	96	62.338	ENSGACG00000008982	scrt1b	96	62.338	Gasterosteus_aculeatus
ENSSLDG00000013565	scrt2	66	70.142	ENSGAGG00000020760	-	74	73.460	Gopherus_agassizii
ENSSLDG00000013565	scrt2	100	58.934	ENSGAGG00000020761	SCRT2	100	61.129	Gopherus_agassizii
ENSSLDG00000013565	scrt2	97	64.194	ENSGAGG00000011736	SCRT1	98	64.194	Gopherus_agassizii
ENSSLDG00000013565	scrt2	97	64.401	ENSHBUG00000016621	scrt1b	96	64.401	Haplochromis_burtoni
ENSSLDG00000013565	scrt2	100	97.492	ENSHBUG00000012492	scrt2	100	97.492	Haplochromis_burtoni
ENSSLDG00000013565	scrt2	97	59.375	ENSHBUG00000019101	-	97	59.375	Haplochromis_burtoni
ENSSLDG00000013565	scrt2	97	64.725	ENSHCOG00000016704	scrt1b	96	64.078	Hippocampus_comes
ENSSLDG00000013565	scrt2	97	59.295	ENSHCOG00000016179	-	97	59.365	Hippocampus_comes
ENSSLDG00000013565	scrt2	100	86.250	ENSHCOG00000008116	scrt2	100	86.250	Hippocampus_comes
ENSSLDG00000013565	scrt2	97	61.489	ENSIPUG00000005547	-	98	61.489	Ictalurus_punctatus
ENSSLDG00000013565	scrt2	97	64.952	ENSIPUG00000004551	scrt1a	97	64.630	Ictalurus_punctatus
ENSSLDG00000013565	scrt2	99	59.271	ENSKMAG00000009489	-	100	58.967	Kryptolebias_marmoratus
ENSSLDG00000013565	scrt2	100	96.552	ENSKMAG00000018087	scrt2	100	96.552	Kryptolebias_marmoratus
ENSSLDG00000013565	scrt2	97	64.401	ENSKMAG00000005484	scrt1b	96	64.401	Kryptolebias_marmoratus
ENSSLDG00000013565	scrt2	100	97.500	ENSLBEG00000015419	scrt2	100	97.500	Labrus_bergylta
ENSSLDG00000013565	scrt2	97	56.875	ENSLBEG00000023388	-	97	59.062	Labrus_bergylta
ENSSLDG00000013565	scrt2	97	66.343	ENSLACG00000003588	SCRT1	96	66.343	Latimeria_chalumnae
ENSSLDG00000013565	scrt2	97	67.638	ENSLOCG00000007573	scrt1b	97	67.638	Lepisosteus_oculatus
ENSSLDG00000013565	scrt2	100	66.049	ENSLOCG00000002246	scrt2	100	65.644	Lepisosteus_oculatus
ENSSLDG00000013565	scrt2	59	67.839	ENSMFAG00000035496	SCRT1	72	83.974	Macaca_fascicularis
ENSSLDG00000013565	scrt2	100	98.119	ENSMAMG00000001291	scrt2	100	98.119	Mastacembelus_armatus
ENSSLDG00000013565	scrt2	97	65.049	ENSMAMG00000011698	scrt1b	96	64.401	Mastacembelus_armatus
ENSSLDG00000013565	scrt2	97	59.375	ENSMZEG00005026702	-	97	59.375	Maylandia_zebra
ENSSLDG00000013565	scrt2	97	64.401	ENSMZEG00005005627	scrt1b	96	64.401	Maylandia_zebra
ENSSLDG00000013565	scrt2	100	97.492	ENSMZEG00005026445	scrt2	100	97.492	Maylandia_zebra
ENSSLDG00000013565	scrt2	80	65.625	ENSMGAG00000016579	SCRT2	97	67.188	Meleagris_gallopavo
ENSSLDG00000013565	scrt2	97	59.813	ENSMMOG00000018345	-	97	59.385	Mola_mola
ENSSLDG00000013565	scrt2	97	63.754	ENSMMOG00000003327	scrt1b	96	63.754	Mola_mola
ENSSLDG00000013565	scrt2	99	94.025	ENSMMOG00000009272	scrt2	99	95.912	Mola_mola
ENSSLDG00000013565	scrt2	97	65.372	ENSMALG00000012704	scrt1b	96	64.725	Monopterus_albus
ENSSLDG00000013565	scrt2	100	79.937	ENSMALG00000013656	scrt2	100	79.937	Monopterus_albus
ENSSLDG00000013565	scrt2	50	77.358	ENSNGAG00000020815	Scrt2	74	80.263	Nannospalax_galili
ENSSLDG00000013565	scrt2	97	59.375	ENSNBRG00000014882	-	97	59.375	Neolamprologus_brichardi
ENSSLDG00000013565	scrt2	97	64.610	ENSNBRG00000013983	scrt1b	96	64.610	Neolamprologus_brichardi
ENSSLDG00000013565	scrt2	100	84.326	ENSNBRG00000007221	scrt2	100	84.326	Neolamprologus_brichardi
ENSSLDG00000013565	scrt2	100	98.119	ENSONIG00000016758	scrt2	100	98.119	Oreochromis_niloticus
ENSSLDG00000013565	scrt2	97	59.517	ENSONIG00000019809	-	100	59.517	Oreochromis_niloticus
ENSSLDG00000013565	scrt2	100	61.818	ENSONIG00000003152	-	100	61.755	Oreochromis_niloticus
ENSSLDG00000013565	scrt2	97	64.078	ENSONIG00000006007	scrt1b	100	63.492	Oreochromis_niloticus
ENSSLDG00000013565	scrt2	99	57.357	ENSORLG00000022825	-	100	57.658	Oryzias_latipes
ENSSLDG00000013565	scrt2	100	95.298	ENSORLG00000024051	scrt2	100	95.298	Oryzias_latipes
ENSSLDG00000013565	scrt2	97	64.401	ENSORLG00000025651	scrt1b	96	63.898	Oryzias_latipes
ENSSLDG00000013565	scrt2	100	95.298	ENSORLG00020011478	scrt2	100	95.298	Oryzias_latipes_hni
ENSSLDG00000013565	scrt2	97	64.401	ENSORLG00020012967	scrt1b	96	63.898	Oryzias_latipes_hni
ENSSLDG00000013565	scrt2	97	64.401	ENSORLG00015019165	scrt1b	96	63.898	Oryzias_latipes_hsok
ENSSLDG00000013565	scrt2	100	95.298	ENSORLG00015005524	scrt2	100	95.298	Oryzias_latipes_hsok
ENSSLDG00000013565	scrt2	99	57.057	ENSORLG00015010104	-	100	57.357	Oryzias_latipes_hsok
ENSSLDG00000013565	scrt2	97	64.401	ENSOMEG00000003925	scrt1b	96	63.898	Oryzias_melastigma
ENSSLDG00000013565	scrt2	100	95.611	ENSOMEG00000002661	scrt2	100	95.611	Oryzias_melastigma
ENSSLDG00000013565	scrt2	99	58.788	ENSOMEG00000000286	-	100	59.394	Oryzias_melastigma
ENSSLDG00000013565	scrt2	97	66.667	ENSPKIG00000022303	SCRT1	97	66.667	Paramormyrops_kingsleyae
ENSSLDG00000013565	scrt2	97	66.019	ENSPKIG00000020085	scrt1a	97	65.696	Paramormyrops_kingsleyae
ENSSLDG00000013565	scrt2	97	62.987	ENSPMGG00000002260	scrt1b	96	62.987	Periophthalmus_magnuspinnatus
ENSSLDG00000013565	scrt2	100	78.438	ENSPMGG00000016561	scrt2	100	78.438	Periophthalmus_magnuspinnatus
ENSSLDG00000013565	scrt2	97	60.692	ENSPMGG00000021402	-	97	58.805	Periophthalmus_magnuspinnatus
ENSSLDG00000013565	scrt2	99	59.271	ENSPFOG00000005616	-	100	59.878	Poecilia_formosa
ENSSLDG00000013565	scrt2	100	96.238	ENSPFOG00000007738	scrt2	100	96.238	Poecilia_formosa
ENSSLDG00000013565	scrt2	97	65.049	ENSPFOG00000017719	scrt1b	96	64.401	Poecilia_formosa
ENSSLDG00000013565	scrt2	100	87.147	ENSPLAG00000005765	scrt2	100	87.147	Poecilia_latipinna
ENSSLDG00000013565	scrt2	97	65.049	ENSPLAG00000009876	scrt1b	96	64.401	Poecilia_latipinna
ENSSLDG00000013565	scrt2	99	59.271	ENSPLAG00000011718	-	100	59.878	Poecilia_latipinna
ENSSLDG00000013565	scrt2	99	59.271	ENSPMEG00000011706	-	100	59.878	Poecilia_mexicana
ENSSLDG00000013565	scrt2	97	65.049	ENSPMEG00000013274	scrt1b	96	64.401	Poecilia_mexicana
ENSSLDG00000013565	scrt2	100	87.147	ENSPMEG00000001538	scrt2	100	87.147	Poecilia_mexicana
ENSSLDG00000013565	scrt2	100	95.925	ENSPREG00000001147	scrt2	100	95.925	Poecilia_reticulata
ENSSLDG00000013565	scrt2	99	58.912	ENSPREG00000012166	-	100	59.517	Poecilia_reticulata
ENSSLDG00000013565	scrt2	97	65.049	ENSPREG00000018985	scrt1b	96	64.401	Poecilia_reticulata
ENSSLDG00000013565	scrt2	97	59.375	ENSPNYG00000008865	-	97	59.375	Pundamilia_nyererei
ENSSLDG00000013565	scrt2	100	84.326	ENSPNYG00000013109	scrt2	100	84.326	Pundamilia_nyererei
ENSSLDG00000013565	scrt2	97	64.401	ENSPNYG00000017733	scrt1b	96	64.401	Pundamilia_nyererei
ENSSLDG00000013565	scrt2	97	66.343	ENSPNAG00000017415	scrt1a	97	66.019	Pygocentrus_nattereri
ENSSLDG00000013565	scrt2	97	61.613	ENSPNAG00000027880	-	98	63.871	Pygocentrus_nattereri
ENSSLDG00000013565	scrt2	97	65.696	ENSSFOG00015001195	SCRT1	97	65.696	Scleropages_formosus
ENSSLDG00000013565	scrt2	97	64.401	ENSSMAG00000019207	scrt1b	96	63.754	Scophthalmus_maximus
ENSSLDG00000013565	scrt2	97	59.752	ENSSMAG00000005122	-	97	59.752	Scophthalmus_maximus
ENSSLDG00000013565	scrt2	97	94.805	ENSSDUG00000001637	scrt2	95	94.805	Seriola_dumerili
ENSSLDG00000013565	scrt2	97	59.688	ENSSDUG00000013215	-	97	59.688	Seriola_dumerili
ENSSLDG00000013565	scrt2	97	64.725	ENSSDUG00000007752	scrt1b	96	64.217	Seriola_dumerili
ENSSLDG00000013565	scrt2	97	62.258	ENSSPUG00000018637	SCRT2	97	62.581	Sphenodon_punctatus
ENSSLDG00000013565	scrt2	100	85.266	ENSSPAG00000014018	scrt2	100	85.266	Stegastes_partitus
ENSSLDG00000013565	scrt2	97	59.688	ENSSPAG00000006788	-	97	59.688	Stegastes_partitus
ENSSLDG00000013565	scrt2	97	64.725	ENSSPAG00000002200	scrt1b	96	64.217	Stegastes_partitus
ENSSLDG00000013565	scrt2	80	62.891	ENSTGUG00000006801	SCRT2	99	66.797	Taeniopygia_guttata
ENSSLDG00000013565	scrt2	97	59.062	ENSTRUG00000012719	-	97	60.938	Takifugu_rubripes
ENSSLDG00000013565	scrt2	81	62.646	ENSTRUG00000019558	-	79	64.981	Takifugu_rubripes
ENSSLDG00000013565	scrt2	99	88.679	ENSTRUG00000007620	scrt2	99	88.050	Takifugu_rubripes
ENSSLDG00000013565	scrt2	96	63.312	ENSTRUG00000011637	scrt1b	97	63.312	Takifugu_rubripes
ENSSLDG00000013565	scrt2	99	92.767	ENSTNIG00000012473	scrt2	99	92.767	Tetraodon_nigroviridis
ENSSLDG00000013565	scrt2	96	63.636	ENSTNIG00000018384	scrt1b	96	63.636	Tetraodon_nigroviridis
ENSSLDG00000013565	scrt2	97	65.049	ENSXCOG00000019675	scrt1b	96	64.401	Xiphophorus_couchianus
ENSSLDG00000013565	scrt2	100	89.655	ENSXCOG00000014367	scrt2	100	89.655	Xiphophorus_couchianus
ENSSLDG00000013565	scrt2	99	57.500	ENSXCOG00000019861	-	100	58.125	Xiphophorus_couchianus
ENSSLDG00000013565	scrt2	99	58.967	ENSXMAG00000015353	-	100	59.574	Xiphophorus_maculatus
ENSSLDG00000013565	scrt2	97	65.049	ENSXMAG00000027885	scrt1b	96	64.401	Xiphophorus_maculatus
ENSSLDG00000013565	scrt2	100	95.611	ENSXMAG00000028567	scrt2	100	95.611	Xiphophorus_maculatus