EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000013581 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 1773 bases
Position: chrPEQF01097434.1:186214-187986
Accession: 111650830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017171	RRM_1	PF00076.22	1.9e-24	1	2
ENSSLDP00000017171	RRM_1	PF00076.22	1.9e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000017778	-	1773	XM_023400757	ENSSLDP00000017171	590 (aa)	XP_023256525	UPI000C6F9E86

Gene Model

Click here to download ENSSLDG00000013581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013581	zgc:153215	76	50.000	ENSG00000183808	RBM12B	98	50.000	Homo_sapiens
ENSSLDG00000013581	zgc:153215	79	56.364	ENSAPOG00000008836	zgc:153215	90	72.973	Acanthochromis_polyacanthus
ENSSLDG00000013581	zgc:153215	80	42.982	ENSAPOG00000013963	rbm12b	74	53.750	Acanthochromis_polyacanthus
ENSSLDG00000013581	zgc:153215	76	47.619	ENSAMEG00000007134	RBM12B	57	50.000	Ailuropoda_melanoleuca
ENSSLDG00000013581	zgc:153215	78	38.255	ENSACIG00000014943	rbm12b	99	53.750	Amphilophus_citrinellus
ENSSLDG00000013581	zgc:153215	97	54.688	ENSACIG00000013317	zgc:153215	99	54.688	Amphilophus_citrinellus
ENSSLDG00000013581	zgc:153215	76	52.381	ENSAOCG00000024270	rbm12b	74	53.750	Amphiprion_ocellaris
ENSSLDG00000013581	zgc:153215	82	72.727	ENSAOCG00000010819	zgc:153215	99	60.902	Amphiprion_ocellaris
ENSSLDG00000013581	zgc:153215	76	52.381	ENSAPEG00000022079	rbm12b	99	53.750	Amphiprion_percula
ENSSLDG00000013581	zgc:153215	99	68.305	ENSATEG00000001886	zgc:153215	100	68.305	Anabas_testudineus
ENSSLDG00000013581	zgc:153215	77	49.438	ENSAPLG00000002020	RBM12B	60	53.086	Anas_platyrhynchos
ENSSLDG00000013581	zgc:153215	99	54.966	ENSACLG00000007675	zgc:153215	100	54.966	Astatotilapia_calliptera
ENSSLDG00000013581	zgc:153215	84	37.589	ENSACLG00000005578	rbm12b	57	51.852	Astatotilapia_calliptera
ENSSLDG00000013581	zgc:153215	77	51.136	ENSACLG00000005575	rbm12b	72	53.086	Astatotilapia_calliptera
ENSSLDG00000013581	zgc:153215	92	39.237	ENSAMXG00000020853	zgc:153215	83	39.142	Astyanax_mexicanus
ENSSLDG00000013581	zgc:153215	76	47.619	ENSCAFG00020012203	RBM12B	55	50.000	Canis_lupus_dingo
ENSSLDG00000013581	zgc:153215	76	47.619	ENSCHIG00000006790	RBM12B	57	50.000	Capra_hircus
ENSSLDG00000013581	zgc:153215	82	41.463	ENSCAPG00000003543	RBM12B	51	50.000	Cavia_aperea
ENSSLDG00000013581	zgc:153215	82	41.463	ENSCPOG00000007815	RBM12B	51	50.000	Cavia_porcellus
ENSSLDG00000013581	zgc:153215	75	47.619	ENSCLAG00000017617	RBM12B	51	50.000	Chinchilla_lanigera
ENSSLDG00000013581	zgc:153215	80	46.067	ENSCPBG00000003061	RBM12B	63	49.383	Chrysemys_picta_bellii
ENSSLDG00000013581	zgc:153215	78	47.826	ENSCGRG00001008710	-	56	50.000	Cricetulus_griseus_chok1gshd
ENSSLDG00000013581	zgc:153215	60	70.270	ENSCSEG00000001575	-	99	70.270	Cynoglossus_semilaevis
ENSSLDG00000013581	zgc:153215	77	50.000	ENSCSEG00000004610	rbm12b	69	55.000	Cynoglossus_semilaevis
ENSSLDG00000013581	zgc:153215	84	61.111	ENSCVAG00000009259	-	99	67.901	Cyprinodon_variegatus
ENSSLDG00000013581	zgc:153215	80	48.315	ENSCVAG00000011047	rbm12b	75	51.250	Cyprinodon_variegatus
ENSSLDG00000013581	zgc:153215	76	48.352	ENSDARG00000079717	rbm12b	69	53.750	Danio_rerio
ENSSLDG00000013581	zgc:153215	99	35.593	ENSDARG00000055889	zgc:153215	99	35.424	Danio_rerio
ENSSLDG00000013581	zgc:153215	75	47.500	ENSETEG00000013005	-	55	47.500	Echinops_telfairi
ENSSLDG00000013581	zgc:153215	76	47.619	ENSEASG00005016297	RBM12B	55	50.000	Equus_asinus_asinus
ENSSLDG00000013581	zgc:153215	99	40.219	ENSELUG00000009039	zgc:153215	97	40.219	Esox_lucius
ENSSLDG00000013581	zgc:153215	76	47.619	ENSFCAG00000029274	RBM12B	56	50.000	Felis_catus
ENSSLDG00000013581	zgc:153215	75	50.000	ENSFDAG00000005576	RBM12B	50	50.000	Fukomys_damarensis
ENSSLDG00000013581	zgc:153215	80	42.708	ENSFHEG00000016425	rbm12b	97	46.914	Fundulus_heteroclitus
ENSSLDG00000013581	zgc:153215	81	64.356	ENSFHEG00000014539	zgc:153215	92	70.000	Fundulus_heteroclitus
ENSSLDG00000013581	zgc:153215	76	48.864	ENSGMOG00000013467	rbm12b	74	51.250	Gadus_morhua
ENSSLDG00000013581	zgc:153215	77	48.315	ENSGALG00000035129	RBM12B	60	51.852	Gallus_gallus
ENSSLDG00000013581	zgc:153215	79	47.917	ENSGAFG00000007224	rbm12b	74	53.086	Gambusia_affinis
ENSSLDG00000013581	zgc:153215	97	46.087	ENSGAFG00000007845	zgc:153215	98	45.739	Gambusia_affinis
ENSSLDG00000013581	zgc:153215	76	51.190	ENSGACG00000008682	rbm12b	72	51.852	Gasterosteus_aculeatus
ENSSLDG00000013581	zgc:153215	99	60.513	ENSHBUG00000016150	zgc:153215	100	60.513	Haplochromis_burtoni
ENSSLDG00000013581	zgc:153215	77	50.000	ENSHBUG00000016227	rbm12b	72	51.852	Haplochromis_burtoni
ENSSLDG00000013581	zgc:153215	77	47.619	ENSHGLG00000009063	RBM12B	50	50.000	Heterocephalus_glaber_female
ENSSLDG00000013581	zgc:153215	77	47.619	ENSHGLG00100021324	RBM12B	50	50.000	Heterocephalus_glaber_male
ENSSLDG00000013581	zgc:153215	75	51.250	ENSHCOG00000014952	rbm12b	97	51.250	Hippocampus_comes
ENSSLDG00000013581	zgc:153215	98	34.380	ENSIPUG00000019731	zgc:153215	99	34.380	Ictalurus_punctatus
ENSSLDG00000013581	zgc:153215	77	47.253	ENSIPUG00000001167	RBM12B	71	51.250	Ictalurus_punctatus
ENSSLDG00000013581	zgc:153215	76	47.619	ENSSTOG00000027445	RBM12B	58	50.000	Ictidomys_tridecemlineatus
ENSSLDG00000013581	zgc:153215	76	50.000	ENSKMAG00000013715	rbm12b	65	51.250	Kryptolebias_marmoratus
ENSSLDG00000013581	zgc:153215	76	48.810	ENSKMAG00000013704	rbm12b	63	50.000	Kryptolebias_marmoratus
ENSSLDG00000013581	zgc:153215	86	57.143	ENSKMAG00000004958	zgc:153215	99	56.429	Kryptolebias_marmoratus
ENSSLDG00000013581	zgc:153215	99	56.432	ENSLBEG00000002597	zgc:153215	99	55.403	Labrus_bergylta
ENSSLDG00000013581	zgc:153215	81	47.423	ENSLOCG00000018344	rbm12b	74	47.423	Lepisosteus_oculatus
ENSSLDG00000013581	zgc:153215	99	65.641	ENSMAMG00000012038	zgc:153215	100	65.641	Mastacembelus_armatus
ENSSLDG00000013581	zgc:153215	77	51.136	ENSMZEG00005015005	rbm12b	74	53.086	Maylandia_zebra
ENSSLDG00000013581	zgc:153215	77	51.136	ENSMZEG00005014845	rbm12b	72	53.086	Maylandia_zebra
ENSSLDG00000013581	zgc:153215	99	60.171	ENSMZEG00005005435	zgc:153215	100	60.171	Maylandia_zebra
ENSSLDG00000013581	zgc:153215	76	50.000	ENSMOCG00000005603	-	50	50.000	Microtus_ochrogaster
ENSSLDG00000013581	zgc:153215	83	73.810	ENSMMOG00000003372	zgc:153215	99	73.810	Mola_mola
ENSSLDG00000013581	zgc:153215	78	44.211	ENSMMOG00000002404	rbm12b	67	49.367	Mola_mola
ENSSLDG00000013581	zgc:153215	80	44.118	ENSMODG00000007436	RBM12B	65	52.500	Monodelphis_domestica
ENSSLDG00000013581	zgc:153215	76	54.762	ENSMALG00000012059	rbm12b	73	55.556	Monopterus_albus
ENSSLDG00000013581	zgc:153215	99	55.308	ENSMALG00000001222	zgc:153215	99	54.966	Monopterus_albus
ENSSLDG00000013581	zgc:153215	78	46.739	ENSMUSG00000052137	Rbm12b2	50	48.750	Mus_musculus
ENSSLDG00000013581	zgc:153215	78	46.739	ENSMUSG00000046667	Rbm12b1	50	48.750	Mus_musculus
ENSSLDG00000013581	zgc:153215	78	46.739	MGP_SPRETEiJ_G0026766	-	50	48.750	Mus_spretus
ENSSLDG00000013581	zgc:153215	77	51.136	ENSNBRG00000015057	rbm12b	74	53.086	Neolamprologus_brichardi
ENSSLDG00000013581	zgc:153215	99	61.026	ENSNBRG00000013644	zgc:153215	100	61.026	Neolamprologus_brichardi
ENSSLDG00000013581	zgc:153215	98	58.549	ENSONIG00000006054	zgc:153215	100	58.549	Oreochromis_niloticus
ENSSLDG00000013581	zgc:153215	77	51.136	ENSONIG00000020612	rbm12b	74	53.086	Oreochromis_niloticus
ENSSLDG00000013581	zgc:153215	80	42.718	ENSOANG00000015735	-	59	50.617	Ornithorhynchus_anatinus
ENSSLDG00000013581	zgc:153215	76	53.571	ENSORLG00000008228	rbm12b	71	54.321	Oryzias_latipes
ENSSLDG00000013581	zgc:153215	76	53.571	ENSORLG00020013619	rbm12b	71	54.321	Oryzias_latipes_hni
ENSSLDG00000013581	zgc:153215	76	53.571	ENSORLG00015019999	rbm12b	71	54.321	Oryzias_latipes_hsok
ENSSLDG00000013581	zgc:153215	78	64.634	ENSOMEG00000004220	zgc:153215	97	65.432	Oryzias_melastigma
ENSSLDG00000013581	zgc:153215	76	47.619	ENSPTIG00000020071	RBM12B	56	50.000	Panthera_tigris_altaica
ENSSLDG00000013581	zgc:153215	77	50.538	ENSPKIG00000018719	rbm12b	73	53.750	Paramormyrops_kingsleyae
ENSSLDG00000013581	zgc:153215	98	34.072	ENSPKIG00000014851	zgc:153215	99	34.072	Paramormyrops_kingsleyae
ENSSLDG00000013581	zgc:153215	76	46.067	ENSPSIG00000001348	RBM12B	61	49.383	Pelodiscus_sinensis
ENSSLDG00000013581	zgc:153215	75	50.000	ENSPEMG00000008279	-	57	50.000	Peromyscus_maniculatus_bairdii
ENSSLDG00000013581	zgc:153215	80	44.118	ENSPCIG00000008556	RBM12B	67	52.500	Phascolarctos_cinereus
ENSSLDG00000013581	zgc:153215	78	50.562	ENSPFOG00000020937	rbm12b	71	53.086	Poecilia_formosa
ENSSLDG00000013581	zgc:153215	94	63.158	ENSPFOG00000017451	zgc:153215	80	67.500	Poecilia_formosa
ENSSLDG00000013581	zgc:153215	83	66.197	ENSPLAG00000000232	zgc:153215	99	66.197	Poecilia_latipinna
ENSSLDG00000013581	zgc:153215	78	50.562	ENSPLAG00000018782	rbm12b	74	53.086	Poecilia_latipinna
ENSSLDG00000013581	zgc:153215	77	50.562	ENSPMEG00000011418	rbm12b	74	53.086	Poecilia_mexicana
ENSSLDG00000013581	zgc:153215	90	66.250	ENSPMEG00000016662	zgc:153215	99	66.250	Poecilia_mexicana
ENSSLDG00000013581	zgc:153215	99	45.890	ENSPREG00000018608	zgc:153215	100	45.890	Poecilia_reticulata
ENSSLDG00000013581	zgc:153215	77	50.562	ENSPREG00000020770	rbm12b	74	53.086	Poecilia_reticulata
ENSSLDG00000013581	zgc:153215	80	65.385	ENSPNYG00000018125	zgc:153215	94	72.840	Pundamilia_nyererei
ENSSLDG00000013581	zgc:153215	77	51.136	ENSPNYG00000016696	rbm12b	74	53.086	Pundamilia_nyererei
ENSSLDG00000013581	zgc:153215	98	36.184	ENSPNAG00000025628	zgc:153215	99	36.184	Pygocentrus_nattereri
ENSSLDG00000013581	zgc:153215	77	48.387	ENSPNAG00000008126	rbm12b	72	53.750	Pygocentrus_nattereri
ENSSLDG00000013581	zgc:153215	81	41.667	ENSRNOG00000055292	LOC679087	56	48.750	Rattus_norvegicus
ENSSLDG00000013581	zgc:153215	76	50.000	ENSRBIG00000035046	RBM12B	54	50.000	Rhinopithecus_bieti
ENSSLDG00000013581	zgc:153215	80	44.118	ENSSHAG00000015335	RBM12B	67	52.500	Sarcophilus_harrisii
ENSSLDG00000013581	zgc:153215	99	36.068	ENSSFOG00015009427	zgc:153215	99	36.068	Scleropages_formosus
ENSSLDG00000013581	zgc:153215	77	46.237	ENSSFOG00015001584	rbm12b	74	51.250	Scleropages_formosus
ENSSLDG00000013581	zgc:153215	77	52.381	ENSSMAG00000019708	rbm12b	74	53.086	Scophthalmus_maximus
ENSSLDG00000013581	zgc:153215	96	67.308	ENSSMAG00000019013	zgc:153215	98	77.778	Scophthalmus_maximus
ENSSLDG00000013581	zgc:153215	88	92.857	ENSSDUG00000012545	zgc:153215	100	92.857	Seriola_dumerili
ENSSLDG00000013581	zgc:153215	75	46.429	ENSSARG00000011845	-	56	48.750	Sorex_araneus
ENSSLDG00000013581	zgc:153215	80	42.982	ENSSPAG00000006774	rbm12b	74	52.500	Stegastes_partitus
ENSSLDG00000013581	zgc:153215	99	49.867	ENSSPAG00000023584	zgc:153215	98	50.667	Stegastes_partitus
ENSSLDG00000013581	zgc:153215	76	50.000	ENSTRUG00000013738	rbm12b	74	50.617	Takifugu_rubripes
ENSSLDG00000013581	zgc:153215	77	50.110	ENSTNIG00000018374	-	99	49.890	Tetraodon_nigroviridis
ENSSLDG00000013581	zgc:153215	76	47.500	ENSTBEG00000000449	RBM12B	53	47.500	Tupaia_belangeri
ENSSLDG00000013581	zgc:153215	76	47.619	ENSUAMG00000023639	RBM12B	55	50.000	Ursus_americanus
ENSSLDG00000013581	zgc:153215	76	47.619	ENSUMAG00000016008	RBM12B	52	50.000	Ursus_maritimus
ENSSLDG00000013581	zgc:153215	76	47.619	ENSVVUG00000002694	RBM12B	55	50.000	Vulpes_vulpes
ENSSLDG00000013581	zgc:153215	94	35.025	ENSXETG00000014694	rbm12b	93	54.321	Xenopus_tropicalis
ENSSLDG00000013581	zgc:153215	77	45.349	ENSXETG00000014696	rbm12b	67	47.500	Xenopus_tropicalis
ENSSLDG00000013581	zgc:153215	73	43.363	ENSXCOG00000019735	-	99	53.086	Xiphophorus_couchianus
ENSSLDG00000013581	zgc:153215	99	44.768	ENSXCOG00000019654	zgc:153215	99	44.768	Xiphophorus_couchianus
ENSSLDG00000013581	zgc:153215	58	74.074	ENSXMAG00000013169	-	84	74.074	Xiphophorus_maculatus
ENSSLDG00000013581	zgc:153215	81	43.363	ENSXMAG00000014213	rbm12b	74	53.086	Xiphophorus_maculatus