EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000013769 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 12610 bases
Position: chrPEQF01098998.1:2080553-2093162
Accession: 111660498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017516	RRM_5	PF13893.6	1.7e-12	1	2
ENSSLDP00000017516	RRM_5	PF13893.6	1.7e-12	2	2
ENSSLDP00000017499	RRM_5	PF13893.6	2e-12	1	2
ENSSLDP00000017499	RRM_5	PF13893.6	2e-12	2	2
ENSSLDP00000017484	RRM_5	PF13893.6	2.4e-12	1	2
ENSSLDP00000017484	RRM_5	PF13893.6	2.4e-12	2	2
ENSSLDP00000017468	RRM_5	PF13893.6	2.6e-12	1	2
ENSSLDP00000017468	RRM_5	PF13893.6	2.6e-12	2	2
ENSSLDP00000017454	RRM_5	PF13893.6	3e-12	1	2
ENSSLDP00000017454	RRM_5	PF13893.6	3e-12	2	2
ENSSLDP00000017516	RRM_1	PF00076.22	1.4e-64	1	3
ENSSLDP00000017516	RRM_1	PF00076.22	1.4e-64	2	3
ENSSLDP00000017516	RRM_1	PF00076.22	1.4e-64	3	3
ENSSLDP00000017499	RRM_1	PF00076.22	1.5e-64	1	3
ENSSLDP00000017499	RRM_1	PF00076.22	1.5e-64	2	3
ENSSLDP00000017499	RRM_1	PF00076.22	1.5e-64	3	3
ENSSLDP00000017484	RRM_1	PF00076.22	1.8e-64	1	3
ENSSLDP00000017484	RRM_1	PF00076.22	1.8e-64	2	3
ENSSLDP00000017484	RRM_1	PF00076.22	1.8e-64	3	3
ENSSLDP00000017468	RRM_1	PF00076.22	1.9e-64	1	3
ENSSLDP00000017468	RRM_1	PF00076.22	1.9e-64	2	3
ENSSLDP00000017468	RRM_1	PF00076.22	1.9e-64	3	3
ENSSLDP00000017454	RRM_1	PF00076.22	2.3e-64	1	3
ENSSLDP00000017454	RRM_1	PF00076.22	2.3e-64	2	3
ENSSLDP00000017454	RRM_1	PF00076.22	2.3e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018093	-	1607	XM_023413801	ENSSLDP00000017484	365 (aa)	XP_023269569	UPI0003BCAA1A
ENSSLDT00000018126	-	1035	-	ENSSLDP00000017516	344 (aa)	-	-
ENSSLDT00000018077	-	1622	XM_023413804	ENSSLDP00000017468	370 (aa)	XP_023269572	-
ENSSLDT00000018063	-	1661	XM_023413797	ENSSLDP00000017454	383 (aa)	XP_023269565	UPI000C304E61
ENSSLDT00000018108	-	1568	XM_023413808	ENSSLDP00000017499	352 (aa)	XP_023269576	-

Gene Model

Click here to download ENSSLDG00000013769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000013769	elavl3	65	41.818	ENSSLDG00000016556	RBMS1	57	36.364
ENSSLDG00000013769	elavl3	90	40.698	ENSSLDG00000009847	celf5a	64	40.698
ENSSLDG00000013769	elavl3	89	37.179	ENSSLDG00000020001	tial1	70	37.179
ENSSLDG00000013769	elavl3	93	65.138	ENSSLDG00000019362	-	97	67.524
ENSSLDG00000013769	elavl3	89	35.227	ENSSLDG00000013940	celf3a	98	35.227
ENSSLDG00000013769	elavl3	64	34.848	ENSSLDG00000004447	rbms2b	53	33.333
ENSSLDG00000013769	elavl3	66	32.500	ENSSLDG00000009165	-	82	32.500
ENSSLDG00000013769	elavl3	99	84.091	ENSSLDG00000005260	elavl4	92	82.527
ENSSLDG00000013769	elavl3	69	32.927	ENSSLDG00000006981	pabpc1l	74	32.927
ENSSLDG00000013769	elavl3	90	38.462	ENSSLDG00000014625	-	97	38.462
ENSSLDG00000013769	elavl3	90	73.163	ENSSLDG00000022499	elavl1a	90	73.163
ENSSLDG00000013769	elavl3	90	37.349	ENSSLDG00000011661	pabpc1a	59	37.349
ENSSLDG00000013769	elavl3	90	40.698	ENSSLDG00000015995	-	76	33.333
ENSSLDG00000013769	elavl3	68	36.667	ENSSLDG00000003394	rbms2a	54	36.667
ENSSLDG00000013769	elavl3	91	34.146	ENSSLDG00000015302	celf3b	56	41.860
ENSSLDG00000013769	elavl3	92	36.145	ENSSLDG00000013025	pabpc4	64	36.145
ENSSLDG00000013769	elavl3	51	32.787	ENSSLDG00000009495	rbms1a	54	32.338
ENSSLDG00000013769	elavl3	90	37.179	ENSSLDG00000011450	tia1l	70	37.179
ENSSLDG00000013769	elavl3	83	42.105	ENSSLDG00000012863	celf1	74	42.105
ENSSLDG00000013769	elavl3	78	42.553	ENSSLDG00000010918	-	63	42.553
ENSSLDG00000013769	elavl3	98	81.694	ENSSLDG00000008455	ELAVL2	100	81.694
ENSSLDG00000013769	elavl3	92	37.349	ENSSLDG00000014156	pabpc1b	59	37.349
ENSSLDG00000013769	elavl3	78	36.957	ENSSLDG00000001157	-	62	36.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013769	elavl3	100	87.738	ENSG00000196361	ELAVL3	100	88.828	Homo_sapiens
ENSSLDG00000013769	elavl3	100	99.709	ENSAPOG00000017565	elavl3	100	99.709	Acanthochromis_polyacanthus
ENSSLDG00000013769	elavl3	99	86.236	ENSAMEG00000010487	ELAVL3	99	87.360	Ailuropoda_melanoleuca
ENSSLDG00000013769	elavl3	100	99.709	ENSACIG00000024190	elavl3	100	99.709	Amphilophus_citrinellus
ENSSLDG00000013769	elavl3	99	100.000	ENSAOCG00000005054	elavl3	99	100.000	Amphiprion_ocellaris
ENSSLDG00000013769	elavl3	99	100.000	ENSAPEG00000011145	elavl3	99	100.000	Amphiprion_percula
ENSSLDG00000013769	elavl3	99	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSSLDG00000013769	elavl3	98	92.778	ENSACAG00000016958	ELAVL3	93	92.778	Anolis_carolinensis
ENSSLDG00000013769	elavl3	100	87.432	ENSANAG00000030798	ELAVL3	100	88.525	Aotus_nancymaae
ENSSLDG00000013769	elavl3	99	100.000	ENSACLG00000018260	elavl3	99	100.000	Astatotilapia_calliptera
ENSSLDG00000013769	elavl3	100	98.864	ENSAMXG00000040498	elavl3	100	98.864	Astyanax_mexicanus
ENSSLDG00000013769	elavl3	100	87.466	ENSBTAG00000014412	ELAVL3	100	88.556	Bos_taurus
ENSSLDG00000013769	elavl3	100	87.738	ENSCJAG00000005589	ELAVL3	100	88.828	Callithrix_jacchus
ENSSLDG00000013769	elavl3	100	87.738	ENSCAFG00000017350	ELAVL3	100	88.828	Canis_familiaris
ENSSLDG00000013769	elavl3	99	89.244	ENSCAFG00020004614	ELAVL3	97	90.407	Canis_lupus_dingo
ENSSLDG00000013769	elavl3	99	88.154	ENSCHIG00000003436	ELAVL3	99	89.256	Capra_hircus
ENSSLDG00000013769	elavl3	99	87.879	ENSTSYG00000036621	ELAVL3	99	88.981	Carlito_syrichta
ENSSLDG00000013769	elavl3	90	75.000	ENSCAPG00000017620	ELAVL3	99	76.235	Cavia_aperea
ENSSLDG00000013769	elavl3	90	75.000	ENSCPOG00000001793	ELAVL3	99	76.235	Cavia_porcellus
ENSSLDG00000013769	elavl3	100	87.738	ENSCCAG00000034350	ELAVL3	100	88.828	Cebus_capucinus
ENSSLDG00000013769	elavl3	100	87.738	ENSCATG00000044086	ELAVL3	100	88.828	Cercocebus_atys
ENSSLDG00000013769	elavl3	100	87.466	ENSCLAG00000016404	ELAVL3	100	88.556	Chinchilla_lanigera
ENSSLDG00000013769	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSSLDG00000013769	elavl3	99	92.733	ENSCPBG00000023982	ELAVL3	100	90.463	Chrysemys_picta_bellii
ENSSLDG00000013769	elavl3	100	87.738	ENSCANG00000038728	ELAVL3	100	88.828	Colobus_angolensis_palliatus
ENSSLDG00000013769	elavl3	100	87.193	ENSCGRG00001018927	Elavl3	100	88.283	Cricetulus_griseus_chok1gshd
ENSSLDG00000013769	elavl3	99	87.328	ENSCGRG00000007158	Elavl3	99	88.430	Cricetulus_griseus_crigri
ENSSLDG00000013769	elavl3	99	99.120	ENSCSEG00000021095	elavl3	99	99.120	Cynoglossus_semilaevis
ENSSLDG00000013769	elavl3	100	99.716	ENSCVAG00000014060	elavl3	100	99.716	Cyprinodon_variegatus
ENSSLDG00000013769	elavl3	99	99.708	ENSDARG00000014420	elavl3	99	99.708	Danio_rerio
ENSSLDG00000013769	elavl3	99	86.777	ENSDORG00000002538	Elavl3	99	87.879	Dipodomys_ordii
ENSSLDG00000013769	elavl3	51	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSSLDG00000013769	elavl3	100	87.738	ENSEASG00005004561	ELAVL3	100	88.828	Equus_asinus_asinus
ENSSLDG00000013769	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSSLDG00000013769	elavl3	100	98.017	ENSELUG00000023043	elavl3	100	98.017	Esox_lucius
ENSSLDG00000013769	elavl3	100	87.738	ENSFCAG00000024763	ELAVL3	100	88.828	Felis_catus
ENSSLDG00000013769	elavl3	100	89.873	ENSFDAG00000008449	ELAVL3	100	89.873	Fukomys_damarensis
ENSSLDG00000013769	elavl3	100	99.419	ENSFHEG00000001675	elavl3	99	99.419	Fundulus_heteroclitus
ENSSLDG00000013769	elavl3	100	97.808	ENSGMOG00000003760	elavl3	100	97.808	Gadus_morhua
ENSSLDG00000013769	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSSLDG00000013769	elavl3	51	62.295	ENSGALG00000054488	-	78	65.041	Gallus_gallus
ENSSLDG00000013769	elavl3	99	98.066	ENSGAFG00000016015	elavl3	98	98.066	Gambusia_affinis
ENSSLDG00000013769	elavl3	99	99.427	ENSGACG00000013839	elavl3	99	99.427	Gasterosteus_aculeatus
ENSSLDG00000013769	elavl3	84	91.810	ENSGAGG00000016141	ELAVL3	99	92.174	Gopherus_agassizii
ENSSLDG00000013769	elavl3	99	87.879	ENSGGOG00000008635	ELAVL3	99	88.981	Gorilla_gorilla
ENSSLDG00000013769	elavl3	100	100.000	ENSHBUG00000020978	elavl3	100	100.000	Haplochromis_burtoni
ENSSLDG00000013769	elavl3	84	67.427	ENSHGLG00000019379	-	97	67.427	Heterocephalus_glaber_female
ENSSLDG00000013769	elavl3	100	87.738	ENSHGLG00000015199	ELAVL3	100	88.828	Heterocephalus_glaber_female
ENSSLDG00000013769	elavl3	95	86.246	ENSHGLG00100011200	ELAVL3	100	87.393	Heterocephalus_glaber_male
ENSSLDG00000013769	elavl3	100	99.726	ENSHCOG00000015894	elavl3	100	99.726	Hippocampus_comes
ENSSLDG00000013769	elavl3	99	99.123	ENSIPUG00000013002	elavl3	98	99.123	Ictalurus_punctatus
ENSSLDG00000013769	elavl3	100	87.738	ENSSTOG00000021111	ELAVL3	100	88.828	Ictidomys_tridecemlineatus
ENSSLDG00000013769	elavl3	99	88.705	ENSJJAG00000023513	Elavl3	99	88.705	Jaculus_jaculus
ENSSLDG00000013769	elavl3	100	99.709	ENSKMAG00000017412	elavl3	100	99.709	Kryptolebias_marmoratus
ENSSLDG00000013769	elavl3	100	99.709	ENSLBEG00000008073	elavl3	98	99.709	Labrus_bergylta
ENSSLDG00000013769	elavl3	100	97.808	ENSLOCG00000007647	elavl3	100	97.808	Lepisosteus_oculatus
ENSSLDG00000013769	elavl3	99	88.187	ENSLAFG00000005013	ELAVL3	99	89.286	Loxodonta_africana
ENSSLDG00000013769	elavl3	100	87.738	ENSMFAG00000003692	ELAVL3	100	88.828	Macaca_fascicularis
ENSSLDG00000013769	elavl3	100	87.738	ENSMMUG00000020616	ELAVL3	100	88.828	Macaca_mulatta
ENSSLDG00000013769	elavl3	100	87.466	ENSMNEG00000043973	ELAVL3	100	88.556	Macaca_nemestrina
ENSSLDG00000013769	elavl3	98	83.265	ENSMLEG00000013976	ELAVL3	100	83.265	Mandrillus_leucophaeus
ENSSLDG00000013769	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSSLDG00000013769	elavl3	99	100.000	ENSMZEG00005019053	elavl3	99	100.000	Maylandia_zebra
ENSSLDG00000013769	elavl3	99	87.328	ENSMAUG00000016478	Elavl3	99	88.430	Mesocricetus_auratus
ENSSLDG00000013769	elavl3	99	88.187	ENSMICG00000016528	ELAVL3	99	89.286	Microcebus_murinus
ENSSLDG00000013769	elavl3	100	87.193	ENSMOCG00000002046	Elavl3	100	88.283	Microtus_ochrogaster
ENSSLDG00000013769	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSSLDG00000013769	elavl3	99	88.981	ENSMODG00000006653	ELAVL3	92	88.981	Monodelphis_domestica
ENSSLDG00000013769	elavl3	99	98.066	ENSMALG00000016659	elavl3	99	98.066	Monopterus_albus
ENSSLDG00000013769	elavl3	100	87.193	MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	Mus_caroli
ENSSLDG00000013769	elavl3	100	87.193	ENSMUSG00000003410	Elavl3	100	88.283	Mus_musculus
ENSSLDG00000013769	elavl3	100	86.921	MGP_PahariEiJ_G0014760	Elavl3	100	88.301	Mus_pahari
ENSSLDG00000013769	elavl3	51	83.036	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSSLDG00000013769	elavl3	100	87.466	ENSMPUG00000005040	ELAVL3	100	88.556	Mustela_putorius_furo
ENSSLDG00000013769	elavl3	99	89.560	ENSMLUG00000016320	ELAVL3	99	89.560	Myotis_lucifugus
ENSSLDG00000013769	elavl3	100	87.738	ENSNGAG00000000968	Elavl3	100	88.828	Nannospalax_galili
ENSSLDG00000013769	elavl3	99	98.066	ENSNBRG00000010319	elavl3	99	98.066	Neolamprologus_brichardi
ENSSLDG00000013769	elavl3	99	91.736	ENSMEUG00000016706	ELAVL3	99	91.736	Notamacropus_eugenii
ENSSLDG00000013769	elavl3	85	89.407	ENSOPRG00000007373	ELAVL3	99	89.431	Ochotona_princeps
ENSSLDG00000013769	elavl3	100	87.738	ENSODEG00000015790	ELAVL3	100	88.828	Octodon_degus
ENSSLDG00000013769	elavl3	99	98.066	ENSONIG00000001538	elavl3	98	98.066	Oreochromis_niloticus
ENSSLDG00000013769	elavl3	88	92.063	ENSOANG00000015046	ELAVL3	98	92.063	Ornithorhynchus_anatinus
ENSSLDG00000013769	elavl3	100	97.808	ENSORLG00000005379	elavl3	100	97.808	Oryzias_latipes
ENSSLDG00000013769	elavl3	100	99.419	ENSORLG00020004570	elavl3	99	100.000	Oryzias_latipes_hni
ENSSLDG00000013769	elavl3	100	96.986	ENSORLG00015000662	elavl3	100	96.986	Oryzias_latipes_hsok
ENSSLDG00000013769	elavl3	100	99.419	ENSOMEG00000023959	elavl3	99	99.419	Oryzias_melastigma
ENSSLDG00000013769	elavl3	100	87.738	ENSOGAG00000007072	ELAVL3	100	88.828	Otolemur_garnettii
ENSSLDG00000013769	elavl3	100	88.011	ENSOARG00000018464	ELAVL3	100	89.101	Ovis_aries
ENSSLDG00000013769	elavl3	100	87.738	ENSPPAG00000033972	ELAVL3	100	88.828	Pan_paniscus
ENSSLDG00000013769	elavl3	100	87.738	ENSPPRG00000005151	ELAVL3	100	88.828	Panthera_pardus
ENSSLDG00000013769	elavl3	98	84.366	ENSPTIG00000013610	ELAVL3	97	86.431	Panthera_tigris_altaica
ENSSLDG00000013769	elavl3	100	87.738	ENSPTRG00000010506	ELAVL3	100	88.828	Pan_troglodytes
ENSSLDG00000013769	elavl3	100	87.738	ENSPANG00000005849	ELAVL3	100	88.828	Papio_anubis
ENSSLDG00000013769	elavl3	99	99.123	ENSPKIG00000016207	elavl3	99	99.123	Paramormyrops_kingsleyae
ENSSLDG00000013769	elavl3	99	100.000	ENSPMGG00000002016	elavl3	99	100.000	Periophthalmus_magnuspinnatus
ENSSLDG00000013769	elavl3	98	97.340	ENSPFOG00000007754	elavl3	100	97.340	Poecilia_formosa
ENSSLDG00000013769	elavl3	99	100.000	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSSLDG00000013769	elavl3	99	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSSLDG00000013769	elavl3	100	99.419	ENSPREG00000006971	elavl3	100	98.956	Poecilia_reticulata
ENSSLDG00000013769	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSSLDG00000013769	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	65	86.822	Procavia_capensis
ENSSLDG00000013769	elavl3	100	87.738	ENSPCOG00000023781	ELAVL3	100	88.828	Propithecus_coquereli
ENSSLDG00000013769	elavl3	100	87.738	ENSPVAG00000014893	ELAVL3	100	88.828	Pteropus_vampyrus
ENSSLDG00000013769	elavl3	99	100.000	ENSPNYG00000013186	elavl3	97	100.000	Pundamilia_nyererei
ENSSLDG00000013769	elavl3	100	98.630	ENSPNAG00000003633	elavl3	100	98.630	Pygocentrus_nattereri
ENSSLDG00000013769	elavl3	100	87.193	ENSRNOG00000013752	Elavl3	100	88.283	Rattus_norvegicus
ENSSLDG00000013769	elavl3	100	87.738	ENSRBIG00000034762	ELAVL3	100	88.828	Rhinopithecus_bieti
ENSSLDG00000013769	elavl3	89	87.600	ENSRROG00000034305	ELAVL3	95	90.909	Rhinopithecus_roxellana
ENSSLDG00000013769	elavl3	99	87.879	ENSSBOG00000030047	ELAVL3	100	90.385	Saimiri_boliviensis_boliviensis
ENSSLDG00000013769	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSSLDG00000013769	elavl3	94	99.068	ENSSFOG00015023630	elavl3	99	99.068	Scleropages_formosus
ENSSLDG00000013769	elavl3	100	99.219	ENSSMAG00000004671	elavl3	100	99.219	Scophthalmus_maximus
ENSSLDG00000013769	elavl3	100	100.000	ENSSDUG00000020708	elavl3	100	100.000	Seriola_dumerili
ENSSLDG00000013769	elavl3	99	78.022	ENSSARG00000005949	ELAVL3	99	79.121	Sorex_araneus
ENSSLDG00000013769	elavl3	100	99.709	ENSSPAG00000000990	elavl3	100	99.709	Stegastes_partitus
ENSSLDG00000013769	elavl3	100	87.738	ENSSSCG00000013617	ELAVL3	100	88.828	Sus_scrofa
ENSSLDG00000013769	elavl3	99	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSSLDG00000013769	elavl3	99	97.260	ENSTNIG00000018572	elavl3	99	97.260	Tetraodon_nigroviridis
ENSSLDG00000013769	elavl3	97	82.209	ENSTBEG00000006133	ELAVL3	100	82.875	Tupaia_belangeri
ENSSLDG00000013769	elavl3	100	87.466	ENSTTRG00000001789	ELAVL3	100	88.556	Tursiops_truncatus
ENSSLDG00000013769	elavl3	100	87.500	ENSUAMG00000000405	ELAVL3	99	88.636	Ursus_americanus
ENSSLDG00000013769	elavl3	98	83.389	ENSUMAG00000019546	ELAVL3	88	84.718	Ursus_maritimus
ENSSLDG00000013769	elavl3	100	87.193	ENSVVUG00000023733	ELAVL3	100	88.283	Vulpes_vulpes
ENSSLDG00000013769	elavl3	99	92.174	ENSXETG00000016741	elavl3	99	92.174	Xenopus_tropicalis
ENSSLDG00000013769	elavl3	100	99.419	ENSXMAG00000018287	elavl3	99	99.419	Xiphophorus_maculatus