EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000013823 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4157 bases
Position: chrPEQF01096608.1:274230-278386
Accession: 111650153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017526	zf-C2H2	PF00096.26	5.9e-27	1	5
ENSSLDP00000017526	zf-C2H2	PF00096.26	5.9e-27	2	5
ENSSLDP00000017526	zf-C2H2	PF00096.26	5.9e-27	3	5
ENSSLDP00000017526	zf-C2H2	PF00096.26	5.9e-27	4	5
ENSSLDP00000017526	zf-C2H2	PF00096.26	5.9e-27	5	5
ENSSLDP00000017526	zf-met	PF12874.7	4.2e-08	1	2
ENSSLDP00000017526	zf-met	PF12874.7	4.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018135	-	1698	XM_023399974	ENSSLDP00000017526	327 (aa)	XP_023255742	UPI000C6F5DC7

Gene Model

Click here to download ENSSLDG00000013823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000013823	gfi1b	61	38.144	ENSSLDG00000000859	-	87	38.095
ENSSLDG00000013823	gfi1b	53	40.964	ENSSLDG00000025676	-	55	40.964
ENSSLDG00000013823	gfi1b	54	43.609	ENSSLDG00000024295	ZNF319	88	43.609
ENSSLDG00000013823	gfi1b	54	42.373	ENSSLDG00000012320	-	96	42.177
ENSSLDG00000013823	gfi1b	100	50.000	ENSSLDG00000020163	gfi1ab	100	50.260
ENSSLDG00000013823	gfi1b	63	40.625	ENSSLDG00000004756	-	96	40.625
ENSSLDG00000013823	gfi1b	58	41.060	ENSSLDG00000020655	-	59	41.060
ENSSLDG00000013823	gfi1b	54	42.500	ENSSLDG00000005839	-	59	42.500
ENSSLDG00000013823	gfi1b	52	44.755	ENSSLDG00000001850	-	56	44.755
ENSSLDG00000013823	gfi1b	51	41.007	ENSSLDG00000010190	-	78	41.007
ENSSLDG00000013823	gfi1b	67	44.248	ENSSLDG00000000203	-	91	39.048
ENSSLDG00000013823	gfi1b	51	41.304	ENSSLDG00000004098	-	95	41.304
ENSSLDG00000013823	gfi1b	60	46.018	ENSSLDG00000021278	-	60	46.018
ENSSLDG00000013823	gfi1b	52	39.412	ENSSLDG00000018273	-	79	40.132
ENSSLDG00000013823	gfi1b	51	46.087	ENSSLDG00000009061	-	90	38.182
ENSSLDG00000013823	gfi1b	51	55.932	ENSSLDG00000001787	zbtb24	81	55.932
ENSSLDG00000013823	gfi1b	58	40.212	ENSSLDG00000005999	-	50	40.212
ENSSLDG00000013823	gfi1b	65	46.218	ENSSLDG00000007756	-	93	45.588
ENSSLDG00000013823	gfi1b	59	44.737	ENSSLDG00000016317	-	85	44.737
ENSSLDG00000013823	gfi1b	51	40.690	ENSSLDG00000002776	-	68	42.029
ENSSLDG00000013823	gfi1b	51	43.972	ENSSLDG00000000352	-	64	43.972
ENSSLDG00000013823	gfi1b	64	48.750	ENSSLDG00000013760	-	99	48.750
ENSSLDG00000013823	gfi1b	67	42.254	ENSSLDG00000017937	-	95	44.000
ENSSLDG00000013823	gfi1b	51	44.538	ENSSLDG00000008645	-	85	44.538
ENSSLDG00000013823	gfi1b	56	43.125	ENSSLDG00000006724	-	92	40.854
ENSSLDG00000013823	gfi1b	64	41.071	ENSSLDG00000016454	-	72	41.071
ENSSLDG00000013823	gfi1b	55	43.966	ENSSLDG00000020990	-	50	40.698
ENSSLDG00000013823	gfi1b	52	36.025	ENSSLDG00000012852	snai2	65	40.541
ENSSLDG00000013823	gfi1b	55	39.310	ENSSLDG00000002515	-	70	39.310
ENSSLDG00000013823	gfi1b	52	43.925	ENSSLDG00000006217	-	77	43.925
ENSSLDG00000013823	gfi1b	52	40.964	ENSSLDG00000016301	-	90	40.964
ENSSLDG00000013823	gfi1b	58	38.144	ENSSLDG00000004485	-	60	40.141
ENSSLDG00000013823	gfi1b	51	33.600	ENSSLDG00000025359	-	53	33.600
ENSSLDG00000013823	gfi1b	96	46.970	ENSSLDG00000020675	-	93	49.351
ENSSLDG00000013823	gfi1b	63	44.079	ENSSLDG00000010390	-	89	44.079
ENSSLDG00000013823	gfi1b	51	41.250	ENSSLDG00000014436	-	74	35.714
ENSSLDG00000013823	gfi1b	51	46.250	ENSSLDG00000001860	-	85	46.250
ENSSLDG00000013823	gfi1b	51	41.228	ENSSLDG00000004005	-	75	41.228
ENSSLDG00000013823	gfi1b	54	41.615	ENSSLDG00000013353	prdm5	73	41.615
ENSSLDG00000013823	gfi1b	52	40.000	ENSSLDG00000014177	zbtb47b	68	40.000
ENSSLDG00000013823	gfi1b	52	41.667	ENSSLDG00000020432	-	86	41.667
ENSSLDG00000013823	gfi1b	51	41.772	ENSSLDG00000009821	-	74	41.772
ENSSLDG00000013823	gfi1b	51	43.333	ENSSLDG00000009582	-	95	43.333
ENSSLDG00000013823	gfi1b	100	36.765	ENSSLDG00000017166	scrt1b	95	36.765
ENSSLDG00000013823	gfi1b	59	43.284	ENSSLDG00000000457	-	75	43.284
ENSSLDG00000013823	gfi1b	54	42.138	ENSSLDG00000023661	-	85	42.138
ENSSLDG00000013823	gfi1b	95	42.143	ENSSLDG00000015116	-	75	40.476
ENSSLDG00000013823	gfi1b	61	43.125	ENSSLDG00000018598	-	86	43.125
ENSSLDG00000013823	gfi1b	51	42.222	ENSSLDG00000005670	-	92	42.222
ENSSLDG00000013823	gfi1b	54	38.621	ENSSLDG00000012036	-	91	40.909
ENSSLDG00000013823	gfi1b	61	36.471	ENSSLDG00000000464	-	64	36.471
ENSSLDG00000013823	gfi1b	68	43.478	ENSSLDG00000020727	-	95	45.977
ENSSLDG00000013823	gfi1b	52	43.925	ENSSLDG00000005868	-	79	43.925
ENSSLDG00000013823	gfi1b	54	39.706	ENSSLDG00000011849	-	55	39.706
ENSSLDG00000013823	gfi1b	65	43.312	ENSSLDG00000018493	-	87	43.312
ENSSLDG00000013823	gfi1b	57	40.708	ENSSLDG00000018521	znf646	55	40.708
ENSSLDG00000013823	gfi1b	71	44.361	ENSSLDG00000006994	-	92	44.361
ENSSLDG00000013823	gfi1b	51	43.885	ENSSLDG00000002756	-	73	43.885
ENSSLDG00000013823	gfi1b	70	35.088	ENSSLDG00000021177	zbtb41	53	34.454
ENSSLDG00000013823	gfi1b	59	41.722	ENSSLDG00000006288	-	92	41.722
ENSSLDG00000013823	gfi1b	51	45.517	ENSSLDG00000007524	-	69	43.103
ENSSLDG00000013823	gfi1b	52	48.571	ENSSLDG00000012133	-	82	48.571
ENSSLDG00000013823	gfi1b	51	40.625	ENSSLDG00000020455	-	83	46.324
ENSSLDG00000013823	gfi1b	53	45.161	ENSSLDG00000012821	znf236	56	45.161
ENSSLDG00000013823	gfi1b	50	77.477	ENSSLDG00000017614	-	84	77.477
ENSSLDG00000013823	gfi1b	51	45.455	ENSSLDG00000018033	-	54	45.455
ENSSLDG00000013823	gfi1b	61	43.373	ENSSLDG00000005850	-	93	43.373
ENSSLDG00000013823	gfi1b	56	41.071	ENSSLDG00000003269	znf710b	50	41.071
ENSSLDG00000013823	gfi1b	57	40.625	ENSSLDG00000023060	-	69	40.625
ENSSLDG00000013823	gfi1b	57	41.765	ENSSLDG00000000376	-	75	41.765
ENSSLDG00000013823	gfi1b	53	87.209	ENSSLDG00000016512	gfi1aa	100	51.026
ENSSLDG00000013823	gfi1b	52	36.905	ENSSLDG00000017718	zbtb48	55	36.905
ENSSLDG00000013823	gfi1b	53	41.765	ENSSLDG00000013170	zbtb17	80	37.705
ENSSLDG00000013823	gfi1b	54	43.609	ENSSLDG00000014166	znf319b	88	43.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013823	gfi1b	100	83.587	ENSAPOG00000001296	gfi1b	100	83.587	Acanthochromis_polyacanthus
ENSSLDG00000013823	gfi1b	100	70.517	ENSACIG00000002190	gfi1b	100	70.517	Amphilophus_citrinellus
ENSSLDG00000013823	gfi1b	100	84.146	ENSAOCG00000021187	gfi1b	100	84.146	Amphiprion_ocellaris
ENSSLDG00000013823	gfi1b	100	84.756	ENSAPEG00000016196	gfi1b	100	84.756	Amphiprion_percula
ENSSLDG00000013823	gfi1b	100	89.970	ENSATEG00000002534	gfi1b	100	89.970	Anabas_testudineus
ENSSLDG00000013823	gfi1b	100	60.117	ENSAPLG00000003373	GFI1B	100	60.117	Anas_platyrhynchos
ENSSLDG00000013823	gfi1b	100	78.593	ENSACLG00000027053	gfi1b	100	78.593	Astatotilapia_calliptera
ENSSLDG00000013823	gfi1b	100	71.554	ENSAMXG00000037544	GFI1B	100	71.554	Astyanax_mexicanus
ENSSLDG00000013823	gfi1b	100	58.434	ENSCAPG00000010404	GFI1B	100	58.434	Cavia_aperea
ENSSLDG00000013823	gfi1b	100	59.483	ENSCPBG00000021186	GFI1B	100	59.483	Chrysemys_picta_bellii
ENSSLDG00000013823	gfi1b	100	81.873	ENSCSEG00000001315	gfi1b	100	81.873	Cynoglossus_semilaevis
ENSSLDG00000013823	gfi1b	100	77.439	ENSCVAG00000017168	gfi1b	100	77.439	Cyprinodon_variegatus
ENSSLDG00000013823	gfi1b	100	70.231	ENSDARG00000079947	gfi1b	99	86.076	Danio_rerio
ENSSLDG00000013823	gfi1b	62	53.431	ENSEEUG00000012609	-	90	53.431	Erinaceus_europaeus
ENSSLDG00000013823	gfi1b	100	77.745	ENSELUG00000016933	gfi1b	100	77.745	Esox_lucius
ENSSLDG00000013823	gfi1b	100	54.987	ENSFALG00000001479	GFI1B	100	54.987	Ficedula_albicollis
ENSSLDG00000013823	gfi1b	100	85.061	ENSFHEG00000015138	gfi1b	100	85.061	Fundulus_heteroclitus
ENSSLDG00000013823	gfi1b	74	83.539	ENSGMOG00000019123	gfi1b	91	83.539	Gadus_morhua
ENSSLDG00000013823	gfi1b	100	58.960	ENSGALG00000003478	GFI1B	100	58.960	Gallus_gallus
ENSSLDG00000013823	gfi1b	71	93.162	ENSGAFG00000003059	gfi1b	100	93.162	Gambusia_affinis
ENSSLDG00000013823	gfi1b	100	77.054	ENSGACG00000018134	gfi1b	100	77.054	Gasterosteus_aculeatus
ENSSLDG00000013823	gfi1b	100	61.721	ENSGAGG00000021327	GFI1B	100	61.721	Gopherus_agassizii
ENSSLDG00000013823	gfi1b	100	78.593	ENSHBUG00000005451	gfi1b	100	78.593	Haplochromis_burtoni
ENSSLDG00000013823	gfi1b	100	77.744	ENSHCOG00000013713	gfi1b	100	77.744	Hippocampus_comes
ENSSLDG00000013823	gfi1b	100	72.321	ENSIPUG00000012769	gfi1b	100	72.321	Ictalurus_punctatus
ENSSLDG00000013823	gfi1b	99	54.032	ENSJJAG00000016355	Gfi1b	100	54.032	Jaculus_jaculus
ENSSLDG00000013823	gfi1b	100	82.371	ENSKMAG00000016047	gfi1b	100	82.371	Kryptolebias_marmoratus
ENSSLDG00000013823	gfi1b	100	83.082	ENSLBEG00000020297	gfi1b	99	83.686	Labrus_bergylta
ENSSLDG00000013823	gfi1b	100	60.714	ENSLACG00000012207	GFI1B	100	60.714	Latimeria_chalumnae
ENSSLDG00000013823	gfi1b	100	68.047	ENSLOCG00000005750	gfi1b	100	68.047	Lepisosteus_oculatus
ENSSLDG00000013823	gfi1b	100	60.588	ENSLAFG00000022367	GFI1B	100	60.588	Loxodonta_africana
ENSSLDG00000013823	gfi1b	100	91.159	ENSMAMG00000003040	gfi1b	100	91.159	Mastacembelus_armatus
ENSSLDG00000013823	gfi1b	99	78.528	ENSMZEG00005015594	gfi1b	99	78.528	Maylandia_zebra
ENSSLDG00000013823	gfi1b	100	59.302	ENSMGAG00000006129	GFI1B	100	59.302	Meleagris_gallopavo
ENSSLDG00000013823	gfi1b	100	85.106	ENSMMOG00000011764	gfi1b	100	85.106	Mola_mola
ENSSLDG00000013823	gfi1b	100	53.243	ENSMODG00000012600	GFI1B	100	53.243	Monodelphis_domestica
ENSSLDG00000013823	gfi1b	100	89.024	ENSMALG00000004034	gfi1b	100	89.024	Monopterus_albus
ENSSLDG00000013823	gfi1b	99	60.241	ENSNGAG00000003333	Gfi1b	100	60.241	Nannospalax_galili
ENSSLDG00000013823	gfi1b	100	78.723	ENSNBRG00000012391	gfi1b	100	78.723	Neolamprologus_brichardi
ENSSLDG00000013823	gfi1b	100	79.027	ENSONIG00000013011	gfi1b	94	91.620	Oreochromis_niloticus
ENSSLDG00000013823	gfi1b	100	58.982	ENSOANG00000014723	GFI1B	100	58.982	Ornithorhynchus_anatinus
ENSSLDG00000013823	gfi1b	84	74.275	ENSORLG00000014390	GFI1B	96	74.275	Oryzias_latipes
ENSSLDG00000013823	gfi1b	100	79.573	ENSORLG00020003719	GFI1B	100	79.573	Oryzias_latipes_hni
ENSSLDG00000013823	gfi1b	100	78.963	ENSORLG00015017142	gfi1b	100	78.963	Oryzias_latipes_hsok
ENSSLDG00000013823	gfi1b	100	77.439	ENSOMEG00000015149	GFI1B	100	78.049	Oryzias_melastigma
ENSSLDG00000013823	gfi1b	100	57.849	ENSOGAG00000008879	GFI1B	100	57.849	Otolemur_garnettii
ENSSLDG00000013823	gfi1b	100	71.429	ENSPKIG00000007643	gfi1b	100	71.429	Paramormyrops_kingsleyae
ENSSLDG00000013823	gfi1b	100	58.857	ENSPSIG00000012112	GFI1B	100	58.857	Pelodiscus_sinensis
ENSSLDG00000013823	gfi1b	99	68.373	ENSPMGG00000006021	gfi1b	99	69.277	Periophthalmus_magnuspinnatus
ENSSLDG00000013823	gfi1b	100	53.117	ENSPCIG00000019724	GFI1B	100	53.117	Phascolarctos_cinereus
ENSSLDG00000013823	gfi1b	100	83.284	ENSPFOG00000003460	gfi1b	100	83.284	Poecilia_formosa
ENSSLDG00000013823	gfi1b	100	84.802	ENSPLAG00000021960	GFI1B	100	84.802	Poecilia_latipinna
ENSSLDG00000013823	gfi1b	100	81.416	ENSPLAG00000017181	GFI1B	100	81.416	Poecilia_latipinna
ENSSLDG00000013823	gfi1b	100	84.498	ENSPMEG00000019220	gfi1b	100	84.498	Poecilia_mexicana
ENSSLDG00000013823	gfi1b	100	84.498	ENSPMEG00000001556	GFI1B	100	84.498	Poecilia_mexicana
ENSSLDG00000013823	gfi1b	100	84.195	ENSPREG00000021718	gfi1b	100	84.195	Poecilia_reticulata
ENSSLDG00000013823	gfi1b	100	77.273	ENSPNYG00000018422	gfi1b	100	77.273	Pundamilia_nyererei
ENSSLDG00000013823	gfi1b	100	70.536	ENSPNAG00000021118	gfi1b	100	70.536	Pygocentrus_nattereri
ENSSLDG00000013823	gfi1b	100	48.787	ENSSHAG00000006462	GFI1B	100	48.787	Sarcophilus_harrisii
ENSSLDG00000013823	gfi1b	83	64.643	ENSSFOG00015011566	gfi1b	90	64.643	Scleropages_formosus
ENSSLDG00000013823	gfi1b	100	87.234	ENSSMAG00000015181	gfi1b	98	87.234	Scophthalmus_maximus
ENSSLDG00000013823	gfi1b	100	98.777	ENSSDUG00000011604	gfi1b	100	98.777	Seriola_dumerili
ENSSLDG00000013823	gfi1b	100	50.725	ENSSPUG00000016039	GFI1B	100	50.725	Sphenodon_punctatus
ENSSLDG00000013823	gfi1b	100	86.280	ENSSPAG00000022914	gfi1b	100	86.280	Stegastes_partitus
ENSSLDG00000013823	gfi1b	68	48.538	ENSTGUG00000015953	-	87	48.538	Taeniopygia_guttata
ENSSLDG00000013823	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSSLDG00000013823	gfi1b	100	79.878	ENSTRUG00000004525	gfi1b	100	79.878	Takifugu_rubripes
ENSSLDG00000013823	gfi1b	100	78.723	ENSTNIG00000003834	gfi1b	100	78.723	Tetraodon_nigroviridis
ENSSLDG00000013823	gfi1b	100	44.510	ENSTBEG00000014459	GFI1B	100	44.510	Tupaia_belangeri
ENSSLDG00000013823	gfi1b	100	57.396	ENSXETG00000006263	gfi1b	100	58.309	Xenopus_tropicalis
ENSSLDG00000013823	gfi1b	100	84.195	ENSXMAG00000027589	gfi1b	100	84.195	Xiphophorus_maculatus