EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000013908 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 37084 bases
Position: chrPEQF01099227.1:390142-427225
Accession: 111668568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017628	SHQ1	PF04925.15	1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018238	-	1809	XM_023424632	ENSSLDP00000017628	602 (aa)	XP_023280400	-

Gene Model

Click here to download ENSSLDG00000013908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000013908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000013908	shq1	67	62.864	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSSLDG00000013908	shq1	100	77.886	ENSAPOG00000000397	shq1	100	76.748	Acanthochromis_polyacanthus
ENSSLDG00000013908	shq1	90	53.191	ENSAMEG00000015140	SHQ1	71	61.707	Ailuropoda_melanoleuca
ENSSLDG00000013908	shq1	100	79.344	ENSACIG00000021249	shq1	100	78.197	Amphilophus_citrinellus
ENSSLDG00000013908	shq1	100	78.837	ENSAOCG00000023311	shq1	100	77.544	Amphiprion_ocellaris
ENSSLDG00000013908	shq1	100	78.827	ENSAPEG00000021686	shq1	100	77.687	Amphiprion_percula
ENSSLDG00000013908	shq1	99	79.900	ENSATEG00000008475	shq1	99	77.521	Anabas_testudineus
ENSSLDG00000013908	shq1	72	58.969	ENSAPLG00000013926	SHQ1	88	58.093	Anas_platyrhynchos
ENSSLDG00000013908	shq1	69	62.911	ENSACAG00000014809	SHQ1	61	63.592	Anolis_carolinensis
ENSSLDG00000013908	shq1	77	59.119	ENSANAG00000029241	SHQ1	72	61.408	Aotus_nancymaae
ENSSLDG00000013908	shq1	77	42.888	ENSANAG00000030500	-	69	43.909	Aotus_nancymaae
ENSSLDG00000013908	shq1	99	75.041	ENSACLG00000023077	shq1	99	71.451	Astatotilapia_calliptera
ENSSLDG00000013908	shq1	76	63.853	ENSAMXG00000043822	shq1	98	55.008	Astyanax_mexicanus
ENSSLDG00000013908	shq1	93	54.419	ENSBTAG00000005436	SHQ1	72	63.043	Bos_taurus
ENSSLDG00000013908	shq1	69	31.323	WBGene00021655	Y48A5A.1	92	30.318	Caenorhabditis_elegans
ENSSLDG00000013908	shq1	67	62.136	ENSCJAG00000015131	SHQ1	72	61.408	Callithrix_jacchus
ENSSLDG00000013908	shq1	70	61.839	ENSCAFG00000006434	SHQ1	72	62.077	Canis_familiaris
ENSSLDG00000013908	shq1	70	62.069	ENSCAFG00020016743	SHQ1	72	62.319	Canis_lupus_dingo
ENSSLDG00000013908	shq1	93	53.754	ENSCHIG00000012271	SHQ1	65	63.043	Capra_hircus
ENSSLDG00000013908	shq1	67	59.367	ENSTSYG00000014439	SHQ1	72	58.881	Carlito_syrichta
ENSSLDG00000013908	shq1	87	47.059	ENSCAPG00000009343	SHQ1	95	60.897	Cavia_aperea
ENSSLDG00000013908	shq1	95	52.632	ENSCPOG00000011443	SHQ1	100	51.597	Cavia_porcellus
ENSSLDG00000013908	shq1	67	53.902	ENSCCAG00000027080	SHQ1	69	53.902	Cebus_capucinus
ENSSLDG00000013908	shq1	77	45.690	ENSCCAG00000036087	-	70	47.631	Cebus_capucinus
ENSSLDG00000013908	shq1	67	63.350	ENSCATG00000041238	SHQ1	71	62.136	Cercocebus_atys
ENSSLDG00000013908	shq1	71	62.557	ENSCLAG00000004206	SHQ1	72	61.836	Chinchilla_lanigera
ENSSLDG00000013908	shq1	52	60.991	ENSCSAG00000011514	SHQ1	66	59.443	Chlorocebus_sabaeus
ENSSLDG00000013908	shq1	99	49.920	ENSCPBG00000006441	SHQ1	100	48.562	Chrysemys_picta_bellii
ENSSLDG00000013908	shq1	64	42.487	ENSCING00000008013	-	85	42.746	Ciona_intestinalis
ENSSLDG00000013908	shq1	66	39.461	ENSCSAVG00000002332	-	97	39.667	Ciona_savignyi
ENSSLDG00000013908	shq1	67	63.592	ENSCANG00000039295	SHQ1	72	62.379	Colobus_angolensis_palliatus
ENSSLDG00000013908	shq1	71	61.364	ENSCGRG00001012583	Shq1	73	61.111	Cricetulus_griseus_chok1gshd
ENSSLDG00000013908	shq1	71	61.364	ENSCGRG00000009849	Shq1	73	61.111	Cricetulus_griseus_crigri
ENSSLDG00000013908	shq1	99	72.816	ENSCSEG00000007829	shq1	99	72.168	Cynoglossus_semilaevis
ENSSLDG00000013908	shq1	99	70.364	ENSCVAG00000020049	shq1	99	71.144	Cyprinodon_variegatus
ENSSLDG00000013908	shq1	99	53.947	ENSDARG00000058522	shq1	97	54.619	Danio_rerio
ENSSLDG00000013908	shq1	92	52.951	ENSDNOG00000033937	SHQ1	72	62.560	Dasypus_novemcinctus
ENSSLDG00000013908	shq1	90	47.038	ENSETEG00000005766	SHQ1	72	52.885	Echinops_telfairi
ENSSLDG00000013908	shq1	61	47.568	ENSEBUG00000005445	shq1	73	49.843	Eptatretus_burgeri
ENSSLDG00000013908	shq1	72	62.556	ENSEASG00005002237	SHQ1	72	62.077	Equus_asinus_asinus
ENSSLDG00000013908	shq1	72	62.556	ENSECAG00000015673	SHQ1	70	62.077	Equus_caballus
ENSSLDG00000013908	shq1	92	52.448	ENSEEUG00000010568	SHQ1	72	61.594	Erinaceus_europaeus
ENSSLDG00000013908	shq1	98	64.034	ENSELUG00000003476	shq1	98	63.516	Esox_lucius
ENSSLDG00000013908	shq1	90	53.464	ENSFCAG00000012781	SHQ1	73	62.077	Felis_catus
ENSSLDG00000013908	shq1	99	50.235	ENSFALG00000013428	SHQ1	67	63.592	Ficedula_albicollis
ENSSLDG00000013908	shq1	67	61.985	ENSFDAG00000005595	SHQ1	64	61.017	Fukomys_damarensis
ENSSLDG00000013908	shq1	98	70.549	ENSFHEG00000017552	shq1	100	72.213	Fundulus_heteroclitus
ENSSLDG00000013908	shq1	64	77.320	ENSGMOG00000007350	shq1	100	77.320	Gadus_morhua
ENSSLDG00000013908	shq1	99	49.839	ENSGALG00000007798	SHQ1	100	49.678	Gallus_gallus
ENSSLDG00000013908	shq1	64	82.474	ENSGACG00000011797	shq1	100	82.474	Gasterosteus_aculeatus
ENSSLDG00000013908	shq1	67	62.621	ENSGGOG00000034818	SHQ1	71	61.408	Gorilla_gorilla
ENSSLDG00000013908	shq1	99	74.711	ENSHBUG00000010857	shq1	99	74.545	Haplochromis_burtoni
ENSSLDG00000013908	shq1	95	49.259	ENSHGLG00000003637	SHQ1	89	50.690	Heterocephalus_glaber_female
ENSSLDG00000013908	shq1	95	49.251	ENSHGLG00100011957	SHQ1	89	51.724	Heterocephalus_glaber_male
ENSSLDG00000013908	shq1	100	66.995	ENSHCOG00000010799	shq1	100	66.667	Hippocampus_comes
ENSSLDG00000013908	shq1	70	67.053	ENSIPUG00000001247	shq1	91	54.983	Ictalurus_punctatus
ENSSLDG00000013908	shq1	71	60.690	ENSSTOG00000010043	SHQ1	76	59.611	Ictidomys_tridecemlineatus
ENSSLDG00000013908	shq1	71	62.528	ENSJJAG00000017611	Shq1	78	62.302	Jaculus_jaculus
ENSSLDG00000013908	shq1	100	73.443	ENSKMAG00000004457	shq1	100	74.098	Kryptolebias_marmoratus
ENSSLDG00000013908	shq1	72	63.596	ENSLACG00000014243	SHQ1	63	64.337	Latimeria_chalumnae
ENSSLDG00000013908	shq1	99	56.709	ENSLOCG00000009970	shq1	96	59.034	Lepisosteus_oculatus
ENSSLDG00000013908	shq1	67	41.951	ENSMFAG00000037396	-	69	41.584	Macaca_fascicularis
ENSSLDG00000013908	shq1	67	63.107	ENSMFAG00000039148	SHQ1	71	61.893	Macaca_fascicularis
ENSSLDG00000013908	shq1	59	62.363	ENSMMUG00000009571	SHQ1	66	60.989	Macaca_mulatta
ENSSLDG00000013908	shq1	70	43.155	ENSMMUG00000021761	-	69	41.584	Macaca_mulatta
ENSSLDG00000013908	shq1	67	63.107	ENSMNEG00000032667	SHQ1	71	61.893	Macaca_nemestrina
ENSSLDG00000013908	shq1	67	62.864	ENSMLEG00000038493	SHQ1	71	61.650	Mandrillus_leucophaeus
ENSSLDG00000013908	shq1	99	77.528	ENSMAMG00000023432	shq1	96	77.368	Mastacembelus_armatus
ENSSLDG00000013908	shq1	99	74.876	ENSMZEG00005008649	shq1	99	74.711	Maylandia_zebra
ENSSLDG00000013908	shq1	99	49.355	ENSMGAG00000009640	SHQ1	68	61.314	Meleagris_gallopavo
ENSSLDG00000013908	shq1	72	60.889	ENSMAUG00000022030	Shq1	73	61.594	Mesocricetus_auratus
ENSSLDG00000013908	shq1	92	51.531	ENSMICG00000009224	SHQ1	71	61.446	Microcebus_murinus
ENSSLDG00000013908	shq1	72	61.486	ENSMOCG00000017836	Shq1	73	62.077	Microtus_ochrogaster
ENSSLDG00000013908	shq1	99	76.717	ENSMMOG00000010569	shq1	99	75.879	Mola_mola
ENSSLDG00000013908	shq1	78	55.372	ENSMODG00000003926	SHQ1	75	57.831	Monodelphis_domestica
ENSSLDG00000013908	shq1	99	79.967	ENSMALG00000008870	shq1	99	79.636	Monopterus_albus
ENSSLDG00000013908	shq1	73	59.645	MGP_CAROLIEiJ_G0028689	Shq1	78	59.202	Mus_caroli
ENSSLDG00000013908	shq1	71	60.860	ENSMUSG00000035378	Shq1	78	60.045	Mus_musculus
ENSSLDG00000013908	shq1	72	61.384	MGP_PahariEiJ_G0022440	Shq1	73	61.836	Mus_pahari
ENSSLDG00000013908	shq1	77	58.506	MGP_SPRETEiJ_G0029717	Shq1	78	59.867	Mus_spretus
ENSSLDG00000013908	shq1	92	54.196	ENSMPUG00000017006	SHQ1	70	61.836	Mustela_putorius_furo
ENSSLDG00000013908	shq1	62	60.513	ENSMLUG00000013539	SHQ1	70	59.621	Myotis_lucifugus
ENSSLDG00000013908	shq1	92	47.619	ENSNGAG00000023317	Shq1	72	54.523	Nannospalax_galili
ENSSLDG00000013908	shq1	84	72.427	ENSNBRG00000024004	shq1	100	71.702	Neolamprologus_brichardi
ENSSLDG00000013908	shq1	77	60.334	ENSNLEG00000002731	SHQ1	71	61.650	Nomascus_leucogenys
ENSSLDG00000013908	shq1	75	40.435	ENSMEUG00000009350	-	77	40.534	Notamacropus_eugenii
ENSSLDG00000013908	shq1	90	51.799	ENSODEG00000009192	SHQ1	90	61.538	Octodon_degus
ENSSLDG00000013908	shq1	99	75.207	ENSONIG00000020264	shq1	99	75.041	Oreochromis_niloticus
ENSSLDG00000013908	shq1	92	54.021	ENSOCUG00000016695	SHQ1	71	63.527	Oryctolagus_cuniculus
ENSSLDG00000013908	shq1	99	65.728	ENSORLG00000023538	shq1	99	65.066	Oryzias_latipes
ENSSLDG00000013908	shq1	99	66.942	ENSORLG00020003697	shq1	99	66.223	Oryzias_latipes_hni
ENSSLDG00000013908	shq1	99	65.289	ENSORLG00015021040	shq1	99	64.570	Oryzias_latipes_hsok
ENSSLDG00000013908	shq1	96	67.814	ENSOMEG00000001225	shq1	97	67.986	Oryzias_melastigma
ENSSLDG00000013908	shq1	78	58.058	ENSOGAG00000003898	SHQ1	73	61.098	Otolemur_garnettii
ENSSLDG00000013908	shq1	70	62.727	ENSOARG00000009547	SHQ1	72	61.575	Ovis_aries
ENSSLDG00000013908	shq1	77	43.579	ENSPPAG00000043263	-	69	43.765	Pan_paniscus
ENSSLDG00000013908	shq1	67	63.107	ENSPPAG00000027714	SHQ1	71	61.893	Pan_paniscus
ENSSLDG00000013908	shq1	90	53.345	ENSPPRG00000004769	SHQ1	72	62.077	Panthera_pardus
ENSSLDG00000013908	shq1	90	50.622	ENSPTIG00000011478	SHQ1	71	58.435	Panthera_tigris_altaica
ENSSLDG00000013908	shq1	77	42.405	ENSPTRG00000048303	-	68	42.402	Pan_troglodytes
ENSSLDG00000013908	shq1	67	63.107	ENSPTRG00000015106	SHQ1	71	61.893	Pan_troglodytes
ENSSLDG00000013908	shq1	67	62.136	ENSPANG00000002881	SHQ1	71	62.379	Papio_anubis
ENSSLDG00000013908	shq1	99	56.572	ENSPKIG00000021517	shq1	98	55.372	Paramormyrops_kingsleyae
ENSSLDG00000013908	shq1	70	60.641	ENSPSIG00000005536	SHQ1	68	60.145	Pelodiscus_sinensis
ENSSLDG00000013908	shq1	99	61.614	ENSPMGG00000008838	shq1	99	61.258	Periophthalmus_magnuspinnatus
ENSSLDG00000013908	shq1	67	62.077	ENSPEMG00000000251	Shq1	73	61.353	Peromyscus_maniculatus_bairdii
ENSSLDG00000013908	shq1	70	57.798	ENSPMAG00000005372	shq1	94	59.233	Petromyzon_marinus
ENSSLDG00000013908	shq1	92	68.750	ENSPFOG00000003118	shq1	99	68.984	Poecilia_formosa
ENSSLDG00000013908	shq1	76	66.091	ENSPMEG00000011076	shq1	97	67.160	Poecilia_mexicana
ENSSLDG00000013908	shq1	84	68.297	ENSPREG00000000591	shq1	94	68.945	Poecilia_reticulata
ENSSLDG00000013908	shq1	67	62.621	ENSPPYG00000013717	SHQ1	71	61.650	Pongo_abelii
ENSSLDG00000013908	shq1	67	62.830	ENSPCAG00000009035	SHQ1	73	62.077	Procavia_capensis
ENSSLDG00000013908	shq1	67	60.671	ENSPCOG00000008415	SHQ1	71	61.631	Propithecus_coquereli
ENSSLDG00000013908	shq1	92	53.147	ENSPVAG00000017392	SHQ1	72	61.353	Pteropus_vampyrus
ENSSLDG00000013908	shq1	99	75.207	ENSPNYG00000003878	shq1	99	75.041	Pundamilia_nyererei
ENSSLDG00000013908	shq1	98	57.591	ENSPNAG00000026840	shq1	99	56.230	Pygocentrus_nattereri
ENSSLDG00000013908	shq1	71	60.633	ENSRNOG00000005433	Shq1	69	61.836	Rattus_norvegicus
ENSSLDG00000013908	shq1	67	60.988	ENSRBIG00000026280	SHQ1	71	59.753	Rhinopithecus_bieti
ENSSLDG00000013908	shq1	67	63.592	ENSRROG00000034126	SHQ1	72	62.379	Rhinopithecus_roxellana
ENSSLDG00000013908	shq1	67	55.610	ENSSBOG00000021038	SHQ1	69	55.122	Saimiri_boliviensis_boliviensis
ENSSLDG00000013908	shq1	70	60.046	ENSSHAG00000015077	SHQ1	74	59.277	Sarcophilus_harrisii
ENSSLDG00000013908	shq1	99	60.233	ENSSFOG00015016241	shq1	99	60.233	Scleropages_formosus
ENSSLDG00000013908	shq1	100	82.488	ENSSMAG00000016151	shq1	100	80.360	Scophthalmus_maximus
ENSSLDG00000013908	shq1	100	97.381	ENSSDUG00000011986	shq1	100	97.381	Seriola_dumerili
ENSSLDG00000013908	shq1	55	59.347	ENSSARG00000007119	SHQ1	60	59.050	Sorex_araneus
ENSSLDG00000013908	shq1	84	49.715	ENSSPUG00000011526	-	61	61.702	Sphenodon_punctatus
ENSSLDG00000013908	shq1	92	54.720	ENSSSCG00000011518	SHQ1	72	62.319	Sus_scrofa
ENSSLDG00000013908	shq1	67	62.768	ENSTGUG00000009933	SHQ1	72	62.768	Taeniopygia_guttata
ENSSLDG00000013908	shq1	99	67.055	ENSTRUG00000009446	shq1	99	66.389	Takifugu_rubripes
ENSSLDG00000013908	shq1	67	73.415	ENSTNIG00000007354	shq1	98	71.396	Tetraodon_nigroviridis
ENSSLDG00000013908	shq1	70	62.069	ENSTTRG00000005320	SHQ1	72	61.594	Tursiops_truncatus
ENSSLDG00000013908	shq1	72	61.098	ENSUMAG00000024031	SHQ1	71	61.481	Ursus_maritimus
ENSSLDG00000013908	shq1	70	50.457	ENSVPAG00000004880	SHQ1	54	62.587	Vicugna_pacos
ENSSLDG00000013908	shq1	92	50.084	ENSVVUG00000013906	SHQ1	72	61.836	Vulpes_vulpes
ENSSLDG00000013908	shq1	99	49.349	ENSXETG00000032215	shq1	99	50.900	Xenopus_tropicalis