EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014005 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9166 bases
Position: chrPEQF01098735.1:689549-698714
Accession: 111653902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017769	RNase_T	PF00929.24	6.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018379	-	1797	XM_023404626	ENSSLDP00000017769	284 (aa)	XP_023260394	UPI000C6F6FDF

Gene Model

Click here to download ENSSLDG00000014005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014005	smfn	71	79.310	ENSG00000076043	REXO2	99	80.645	Homo_sapiens
ENSSLDG00000014005	smfn	71	79.803	ENSAMEG00000013263	REXO2	86	79.803	Ailuropoda_melanoleuca
ENSSLDG00000014005	smfn	65	89.247	ENSACIG00000023553	smfn	100	89.247	Amphilophus_citrinellus
ENSSLDG00000014005	smfn	99	74.021	ENSAPEG00000012435	smfn	99	74.021	Amphiprion_percula
ENSSLDG00000014005	smfn	98	78.214	ENSATEG00000015385	smfn	98	78.214	Anabas_testudineus
ENSSLDG00000014005	smfn	68	78.125	ENSAPLG00000005045	REXO2	94	78.125	Anas_platyrhynchos
ENSSLDG00000014005	smfn	64	73.770	ENSACAG00000011631	REXO2	86	73.770	Anolis_carolinensis
ENSSLDG00000014005	smfn	77	76.818	ENSANAG00000020834	REXO2	93	76.818	Aotus_nancymaae
ENSSLDG00000014005	smfn	81	79.476	ENSACLG00000024566	smfn	100	85.340	Astatotilapia_calliptera
ENSSLDG00000014005	smfn	71	79.803	ENSBTAG00000005843	REXO2	86	79.803	Bos_taurus
ENSSLDG00000014005	smfn	64	45.856	WBGene00007429	C08B6.8	93	50.685	Caenorhabditis_elegans
ENSSLDG00000014005	smfn	71	79.310	ENSCJAG00000012434	REXO2	93	75.909	Callithrix_jacchus
ENSSLDG00000014005	smfn	71	78.818	ENSCAFG00000013511	REXO2	86	78.818	Canis_familiaris
ENSSLDG00000014005	smfn	71	79.803	ENSCAFG00020002513	REXO2	86	79.803	Canis_lupus_dingo
ENSSLDG00000014005	smfn	71	79.803	ENSCHIG00000009264	REXO2	86	79.803	Capra_hircus
ENSSLDG00000014005	smfn	71	80.597	ENSTSYG00000002237	REXO2	85	80.597	Carlito_syrichta
ENSSLDG00000014005	smfn	68	69.948	ENSTSYG00000027948	-	99	69.948	Carlito_syrichta
ENSSLDG00000014005	smfn	65	81.720	ENSCAPG00000006093	REXO2	99	81.720	Cavia_aperea
ENSSLDG00000014005	smfn	71	80.296	ENSCPOG00000010548	REXO2	86	80.296	Cavia_porcellus
ENSSLDG00000014005	smfn	77	76.818	ENSCCAG00000034979	REXO2	93	76.818	Cebus_capucinus
ENSSLDG00000014005	smfn	71	79.310	ENSCATG00000015278	REXO2	86	79.310	Cercocebus_atys
ENSSLDG00000014005	smfn	78	75.225	ENSCLAG00000011195	REXO2	94	75.225	Chinchilla_lanigera
ENSSLDG00000014005	smfn	71	79.310	ENSCSAG00000002754	REXO2	86	79.310	Chlorocebus_sabaeus
ENSSLDG00000014005	smfn	71	78.325	ENSCHOG00000000642	-	86	78.325	Choloepus_hoffmanni
ENSSLDG00000014005	smfn	50	74.126	ENSCPBG00000009359	REXO2	99	74.126	Chrysemys_picta_bellii
ENSSLDG00000014005	smfn	64	57.692	ENSCING00000009858	-	88	57.692	Ciona_intestinalis
ENSSLDG00000014005	smfn	71	79.310	ENSCANG00000034756	REXO2	86	79.310	Colobus_angolensis_palliatus
ENSSLDG00000014005	smfn	71	77.340	ENSCGRG00001010922	-	99	77.340	Cricetulus_griseus_chok1gshd
ENSSLDG00000014005	smfn	71	78.818	ENSCGRG00001013673	-	99	78.818	Cricetulus_griseus_chok1gshd
ENSSLDG00000014005	smfn	71	79.803	ENSCGRG00001019814	-	86	79.803	Cricetulus_griseus_chok1gshd
ENSSLDG00000014005	smfn	71	79.803	ENSCGRG00000006235	Rexo2	86	79.803	Cricetulus_griseus_crigri
ENSSLDG00000014005	smfn	97	70.504	ENSCSEG00000007214	smfn	97	70.504	Cynoglossus_semilaevis
ENSSLDG00000014005	smfn	63	83.889	ENSCVAG00000012008	smfn	97	83.889	Cyprinodon_variegatus
ENSSLDG00000014005	smfn	86	68.898	ENSDARG00000009806	smfn	93	68.898	Danio_rerio
ENSSLDG00000014005	smfn	62	83.051	ENSDNOG00000046533	REXO2	85	83.051	Dasypus_novemcinctus
ENSSLDG00000014005	smfn	68	64.249	ENSDORG00000025142	-	86	63.131	Dipodomys_ordii
ENSSLDG00000014005	smfn	71	80.296	ENSDORG00000011255	Rexo2	86	80.296	Dipodomys_ordii
ENSSLDG00000014005	smfn	69	47.805	FBgn0039115	CG10214	97	47.805	Drosophila_melanogaster
ENSSLDG00000014005	smfn	63	75.978	ENSEBUG00000013964	REXO2	61	75.978	Eptatretus_burgeri
ENSSLDG00000014005	smfn	71	79.803	ENSEASG00005006674	REXO2	86	79.803	Equus_asinus_asinus
ENSSLDG00000014005	smfn	71	79.803	ENSECAG00000005988	REXO2	86	79.803	Equus_caballus
ENSSLDG00000014005	smfn	98	63.028	ENSELUG00000020072	smfn	98	63.028	Esox_lucius
ENSSLDG00000014005	smfn	71	79.803	ENSFCAG00000018632	REXO2	86	79.803	Felis_catus
ENSSLDG00000014005	smfn	66	79.144	ENSFALG00000010044	REXO2	93	79.144	Ficedula_albicollis
ENSSLDG00000014005	smfn	71	80.296	ENSFDAG00000011764	REXO2	86	80.296	Fukomys_damarensis
ENSSLDG00000014005	smfn	66	82.447	ENSGMOG00000006370	smfn	97	82.447	Gadus_morhua
ENSSLDG00000014005	smfn	69	80.000	ENSGALG00000035980	REXO2	87	77.340	Gallus_gallus
ENSSLDG00000014005	smfn	99	66.431	ENSGAFG00000015349	smfn	99	66.431	Gambusia_affinis
ENSSLDG00000014005	smfn	69	86.667	ENSGACG00000020096	smfn	96	86.667	Gasterosteus_aculeatus
ENSSLDG00000014005	smfn	71	77.723	ENSGAGG00000021126	REXO2	88	77.723	Gopherus_agassizii
ENSSLDG00000014005	smfn	71	79.310	ENSGGOG00000023267	REXO2	86	79.310	Gorilla_gorilla
ENSSLDG00000014005	smfn	81	58.952	ENSHBUG00000020097	REXO2	83	58.952	Haplochromis_burtoni
ENSSLDG00000014005	smfn	71	79.803	ENSHGLG00000013556	REXO2	86	79.803	Heterocephalus_glaber_female
ENSSLDG00000014005	smfn	71	80.296	ENSHGLG00100005257	REXO2	86	80.296	Heterocephalus_glaber_male
ENSSLDG00000014005	smfn	63	82.222	ENSHCOG00000007122	smfn	98	82.222	Hippocampus_comes
ENSSLDG00000014005	smfn	70	85.000	ENSIPUG00000020440	rexo2	73	86.364	Ictalurus_punctatus
ENSSLDG00000014005	smfn	71	80.296	ENSSTOG00000012465	REXO2	86	80.296	Ictidomys_tridecemlineatus
ENSSLDG00000014005	smfn	71	80.296	ENSJJAG00000013710	-	86	80.296	Jaculus_jaculus
ENSSLDG00000014005	smfn	71	57.143	ENSJJAG00000022605	-	82	57.143	Jaculus_jaculus
ENSSLDG00000014005	smfn	80	78.355	ENSKMAG00000016795	smfn	82	79.221	Kryptolebias_marmoratus
ENSSLDG00000014005	smfn	67	83.598	ENSLBEG00000006021	smfn	100	83.598	Labrus_bergylta
ENSSLDG00000014005	smfn	77	65.471	ENSLACG00000018623	REXO2	90	65.471	Latimeria_chalumnae
ENSSLDG00000014005	smfn	70	84.500	ENSLOCG00000002389	smfn	95	84.500	Lepisosteus_oculatus
ENSSLDG00000014005	smfn	70	81.818	ENSLAFG00000012451	REXO2	86	79.803	Loxodonta_africana
ENSSLDG00000014005	smfn	71	79.310	ENSMFAG00000041155	REXO2	86	79.310	Macaca_fascicularis
ENSSLDG00000014005	smfn	71	79.310	ENSMMUG00000012269	REXO2	86	79.310	Macaca_mulatta
ENSSLDG00000014005	smfn	71	79.310	ENSMNEG00000033379	REXO2	86	79.310	Macaca_nemestrina
ENSSLDG00000014005	smfn	71	79.310	ENSMLEG00000036571	REXO2	86	79.310	Mandrillus_leucophaeus
ENSSLDG00000014005	smfn	99	78.014	ENSMAMG00000021209	smfn	99	78.014	Mastacembelus_armatus
ENSSLDG00000014005	smfn	81	79.476	ENSMZEG00005023224	-	83	79.476	Maylandia_zebra
ENSSLDG00000014005	smfn	81	79.476	ENSMZEG00005020730	REXO2	83	79.476	Maylandia_zebra
ENSSLDG00000014005	smfn	56	77.640	ENSMGAG00000003026	REXO2	99	77.640	Meleagris_gallopavo
ENSSLDG00000014005	smfn	71	79.803	ENSMAUG00000014576	Rexo2	86	79.803	Mesocricetus_auratus
ENSSLDG00000014005	smfn	71	80.296	ENSMICG00000010094	REXO2	86	80.296	Microcebus_murinus
ENSSLDG00000014005	smfn	71	79.803	ENSMOCG00000009016	Rexo2	86	79.803	Microtus_ochrogaster
ENSSLDG00000014005	smfn	96	68.727	ENSMMOG00000006430	smfn	97	68.727	Mola_mola
ENSSLDG00000014005	smfn	79	75.000	ENSMODG00000013913	REXO2	93	75.000	Monodelphis_domestica
ENSSLDG00000014005	smfn	97	75.000	ENSMALG00000018130	smfn	79	75.000	Monopterus_albus
ENSSLDG00000014005	smfn	72	80.000	MGP_CAROLIEiJ_G0032166	Rexo2	86	80.000	Mus_caroli
ENSSLDG00000014005	smfn	72	79.512	ENSMUSG00000032026	Rexo2	86	79.512	Mus_musculus
ENSSLDG00000014005	smfn	72	79.512	MGP_PahariEiJ_G0015034	Rexo2	86	79.512	Mus_pahari
ENSSLDG00000014005	smfn	72	79.512	MGP_SPRETEiJ_G0033305	Rexo2	86	79.512	Mus_spretus
ENSSLDG00000014005	smfn	71	79.803	ENSMPUG00000003947	REXO2	86	79.803	Mustela_putorius_furo
ENSSLDG00000014005	smfn	71	79.310	ENSMLUG00000009030	REXO2	86	79.310	Myotis_lucifugus
ENSSLDG00000014005	smfn	71	79.803	ENSNGAG00000008819	Rexo2	99	79.803	Nannospalax_galili
ENSSLDG00000014005	smfn	66	86.702	ENSNBRG00000006529	smfn	99	86.702	Neolamprologus_brichardi
ENSSLDG00000014005	smfn	51	52.778	ENSNBRG00000015319	-	88	52.778	Neolamprologus_brichardi
ENSSLDG00000014005	smfn	71	79.310	ENSNLEG00000029745	REXO2	86	79.310	Nomascus_leucogenys
ENSSLDG00000014005	smfn	71	80.788	ENSMEUG00000011558	REXO2	93	80.788	Notamacropus_eugenii
ENSSLDG00000014005	smfn	71	55.665	ENSOPRG00000011076	REXO2	86	55.665	Ochotona_princeps
ENSSLDG00000014005	smfn	68	63.077	ENSODEG00000016046	-	98	63.077	Octodon_degus
ENSSLDG00000014005	smfn	65	81.720	ENSODEG00000009750	-	99	81.720	Octodon_degus
ENSSLDG00000014005	smfn	81	81.223	ENSONIG00000001954	smfn	93	81.223	Oreochromis_niloticus
ENSSLDG00000014005	smfn	71	78.325	ENSOANG00000001754	REXO2	94	73.009	Ornithorhynchus_anatinus
ENSSLDG00000014005	smfn	71	80.296	ENSOCUG00000004274	REXO2	81	80.296	Oryctolagus_cuniculus
ENSSLDG00000014005	smfn	90	71.923	ENSORLG00000005119	smfn	81	71.923	Oryzias_latipes
ENSSLDG00000014005	smfn	90	72.308	ENSORLG00020010121	smfn	81	72.308	Oryzias_latipes_hni
ENSSLDG00000014005	smfn	90	73.333	ENSORLG00015015699	smfn	81	73.333	Oryzias_latipes_hsok
ENSSLDG00000014005	smfn	50	78.873	ENSOMEG00000008940	-	99	78.873	Oryzias_melastigma
ENSSLDG00000014005	smfn	88	71.600	ENSOMEG00000016878	REXO2	89	71.600	Oryzias_melastigma
ENSSLDG00000014005	smfn	71	80.296	ENSOGAG00000016860	REXO2	86	80.296	Otolemur_garnettii
ENSSLDG00000014005	smfn	70	81.818	ENSOARG00000001040	REXO2	94	80.597	Ovis_aries
ENSSLDG00000014005	smfn	71	79.310	ENSPPAG00000039849	REXO2	86	79.310	Pan_paniscus
ENSSLDG00000014005	smfn	71	79.803	ENSPPRG00000007255	REXO2	86	79.803	Panthera_pardus
ENSSLDG00000014005	smfn	65	81.183	ENSPTIG00000015578	REXO2	99	81.183	Panthera_tigris_altaica
ENSSLDG00000014005	smfn	71	79.310	ENSPTRG00000004306	REXO2	86	79.310	Pan_troglodytes
ENSSLDG00000014005	smfn	71	79.310	ENSPANG00000010675	REXO2	86	79.310	Papio_anubis
ENSSLDG00000014005	smfn	82	73.276	ENSPKIG00000000911	smfn	77	86.486	Paramormyrops_kingsleyae
ENSSLDG00000014005	smfn	70	80.808	ENSPSIG00000005151	REXO2	73	79.703	Pelodiscus_sinensis
ENSSLDG00000014005	smfn	65	84.946	ENSPMGG00000007442	smfn	99	84.946	Periophthalmus_magnuspinnatus
ENSSLDG00000014005	smfn	71	65.025	ENSPEMG00000001421	Rexo2	85	65.025	Peromyscus_maniculatus_bairdii
ENSSLDG00000014005	smfn	79	75.000	ENSPCIG00000011227	REXO2	58	75.000	Phascolarctos_cinereus
ENSSLDG00000014005	smfn	99	68.310	ENSPFOG00000017861	smfn	99	86.567	Poecilia_formosa
ENSSLDG00000014005	smfn	84	67.220	ENSPLAG00000007327	REXO2	92	67.220	Poecilia_latipinna
ENSSLDG00000014005	smfn	99	68.310	ENSPMEG00000017343	smfn	100	68.310	Poecilia_mexicana
ENSSLDG00000014005	smfn	99	66.549	ENSPREG00000016438	smfn	100	66.549	Poecilia_reticulata
ENSSLDG00000014005	smfn	71	79.310	ENSPPYG00000003895	REXO2	86	79.310	Pongo_abelii
ENSSLDG00000014005	smfn	70	81.313	ENSPCAG00000005237	REXO2	86	79.310	Procavia_capensis
ENSSLDG00000014005	smfn	59	80.952	ENSPCOG00000027639	REXO2	86	80.952	Propithecus_coquereli
ENSSLDG00000014005	smfn	71	67.805	ENSPVAG00000005295	REXO2	86	67.805	Pteropus_vampyrus
ENSSLDG00000014005	smfn	81	79.039	ENSPNYG00000018401	smfn	83	79.039	Pundamilia_nyererei
ENSSLDG00000014005	smfn	77	77.193	ENSPNAG00000005290	smfn	83	78.319	Pygocentrus_nattereri
ENSSLDG00000014005	smfn	72	79.512	ENSRNOG00000018939	Rexo2	86	79.512	Rattus_norvegicus
ENSSLDG00000014005	smfn	71	79.310	ENSRBIG00000037809	REXO2	86	79.310	Rhinopithecus_bieti
ENSSLDG00000014005	smfn	71	79.310	ENSRROG00000038928	REXO2	86	79.310	Rhinopithecus_roxellana
ENSSLDG00000014005	smfn	63	43.085	YLR059C	REX2	76	40.865	Saccharomyces_cerevisiae
ENSSLDG00000014005	smfn	77	76.818	ENSSBOG00000028651	REXO2	93	76.818	Saimiri_boliviensis_boliviensis
ENSSLDG00000014005	smfn	79	75.000	ENSSHAG00000008008	REXO2	94	75.000	Sarcophilus_harrisii
ENSSLDG00000014005	smfn	65	83.784	ENSSFOG00015022414	smfn	98	83.784	Scleropages_formosus
ENSSLDG00000014005	smfn	99	74.733	ENSSMAG00000003168	smfn	99	74.733	Scophthalmus_maximus
ENSSLDG00000014005	smfn	100	95.789	ENSSDUG00000015624	smfn	100	95.789	Seriola_dumerili
ENSSLDG00000014005	smfn	56	73.750	ENSSPUG00000006005	REXO2	86	73.750	Sphenodon_punctatus
ENSSLDG00000014005	smfn	65	92.432	ENSSPAG00000001530	smfn	99	92.432	Stegastes_partitus
ENSSLDG00000014005	smfn	71	79.803	ENSSSCG00000015056	REXO2	86	79.803	Sus_scrofa
ENSSLDG00000014005	smfn	70	78.788	ENSTGUG00000000121	REXO2	93	74.312	Taeniopygia_guttata
ENSSLDG00000014005	smfn	90	69.145	ENSTRUG00000021529	smfn	99	69.145	Takifugu_rubripes
ENSSLDG00000014005	smfn	77	79.358	ENSTNIG00000008588	smfn	96	80.734	Tetraodon_nigroviridis
ENSSLDG00000014005	smfn	71	80.296	ENSTBEG00000017040	REXO2	86	80.296	Tupaia_belangeri
ENSSLDG00000014005	smfn	70	81.313	ENSTTRG00000014928	REXO2	84	81.313	Tursiops_truncatus
ENSSLDG00000014005	smfn	71	73.529	ENSUAMG00000019096	REXO2	84	82.209	Ursus_americanus
ENSSLDG00000014005	smfn	71	79.803	ENSUMAG00000003770	REXO2	86	79.803	Ursus_maritimus
ENSSLDG00000014005	smfn	65	62.903	ENSVPAG00000006301	REXO2	99	62.903	Vicugna_pacos
ENSSLDG00000014005	smfn	72	79.412	ENSVVUG00000025223	REXO2	86	79.803	Vulpes_vulpes
ENSSLDG00000014005	smfn	75	77.465	ENSXETG00000012648	rexo2	87	77.103	Xenopus_tropicalis
ENSSLDG00000014005	smfn	67	82.199	ENSXCOG00000018838	smfn	95	83.871	Xiphophorus_couchianus
ENSSLDG00000014005	smfn	99	64.311	ENSXMAG00000021125	smfn	88	64.311	Xiphophorus_maculatus