EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014113 (Gene tree)
Gene ID: -
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4369 bases
Position: chrPEQF01099033.1:504786-509154
Accession: 111661958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017928	zf-U11-48K	PF05253.12	1.7e-20	1	2
ENSSLDP00000017928	zf-U11-48K	PF05253.12	1.7e-20	2	2
ENSSLDP00000017913	zf-U11-48K	PF05253.12	2.8e-20	1	2
ENSSLDP00000017913	zf-U11-48K	PF05253.12	2.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018539	-	459	-	ENSSLDP00000017928	152 (aa)	-	-
ENSSLDT00000018524	-	1441	XM_023415675	ENSSLDP00000017913	180 (aa)	XP_023271443	UPI000C6FC8E5

Gene Model

Click here to download ENSSLDG00000014113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014113	zgc:56699	96	59.302	ENSAPOG00000021951	-	97	59.302	Acanthochromis_polyacanthus
ENSSLDG00000014113	zgc:56699	79	66.897	ENSAPOG00000000311	-	80	66.897	Acanthochromis_polyacanthus
ENSSLDG00000014113	zgc:56699	99	67.598	ENSACIG00000013400	zgc:56699	99	67.598	Amphilophus_citrinellus
ENSSLDG00000014113	zgc:56699	96	62.791	ENSAOCG00000013650	-	97	62.791	Amphiprion_ocellaris
ENSSLDG00000014113	zgc:56699	95	62.500	ENSAPEG00000006689	zgc:56699	95	62.500	Amphiprion_percula
ENSSLDG00000014113	zgc:56699	100	81.667	ENSATEG00000024058	zgc:56699	100	81.667	Anabas_testudineus
ENSSLDG00000014113	zgc:56699	99	67.778	ENSACLG00000023562	zgc:56699	92	67.778	Astatotilapia_calliptera
ENSSLDG00000014113	zgc:56699	97	56.667	ENSAMXG00000038346	zgc:56699	99	56.667	Astyanax_mexicanus
ENSSLDG00000014113	zgc:56699	83	54.839	ENSAMXG00000036095	-	65	54.839	Astyanax_mexicanus
ENSSLDG00000014113	zgc:56699	97	65.143	ENSCSEG00000021520	zgc:56699	83	65.143	Cynoglossus_semilaevis
ENSSLDG00000014113	zgc:56699	83	61.333	ENSCVAG00000009972	zgc:56699	78	61.333	Cyprinodon_variegatus
ENSSLDG00000014113	zgc:56699	96	49.162	ENSDARG00000000887	zgc:56699	98	49.162	Danio_rerio
ENSSLDG00000014113	zgc:56699	80	52.703	ENSDARG00000099586	CR382383.2	83	52.703	Danio_rerio
ENSSLDG00000014113	zgc:56699	64	47.475	ENSEBUG00000005577	-	62	44.538	Eptatretus_burgeri
ENSSLDG00000014113	zgc:56699	96	56.983	ENSELUG00000003242	gtsf1	98	56.983	Esox_lucius
ENSSLDG00000014113	zgc:56699	98	69.318	ENSFHEG00000006036	zgc:56699	98	69.128	Fundulus_heteroclitus
ENSSLDG00000014113	zgc:56699	79	69.167	ENSGMOG00000007295	zgc:56699	99	69.167	Gadus_morhua
ENSSLDG00000014113	zgc:56699	61	47.826	ENSGALG00000035365	-	65	47.826	Gallus_gallus
ENSSLDG00000014113	zgc:56699	98	69.492	ENSGAFG00000020743	zgc:56699	99	69.492	Gambusia_affinis
ENSSLDG00000014113	zgc:56699	99	67.778	ENSHBUG00000005327	zgc:56699	100	67.778	Haplochromis_burtoni
ENSSLDG00000014113	zgc:56699	96	53.143	ENSHCOG00000010296	-	99	53.143	Hippocampus_comes
ENSSLDG00000014113	zgc:56699	96	50.279	ENSIPUG00000011498	zgc:56699	95	50.279	Ictalurus_punctatus
ENSSLDG00000014113	zgc:56699	97	75.429	ENSLBEG00000015981	zgc:56699	100	74.150	Labrus_bergylta
ENSSLDG00000014113	zgc:56699	78	48.936	ENSLOCG00000004469	zgc:56699	97	48.936	Lepisosteus_oculatus
ENSSLDG00000014113	zgc:56699	99	73.034	ENSMAMG00000001846	zgc:56699	99	73.034	Mastacembelus_armatus
ENSSLDG00000014113	zgc:56699	99	67.778	ENSMZEG00005026479	zgc:56699	92	67.778	Maylandia_zebra
ENSSLDG00000014113	zgc:56699	99	52.880	ENSMMOG00000017331	zgc:56699	99	52.880	Mola_mola
ENSSLDG00000014113	zgc:56699	99	67.222	ENSNBRG00000006336	zgc:56699	100	67.222	Neolamprologus_brichardi
ENSSLDG00000014113	zgc:56699	99	67.778	ENSONIG00000016720	zgc:56699	92	67.778	Oreochromis_niloticus
ENSSLDG00000014113	zgc:56699	61	39.823	ENSOANG00000030381	-	74	39.823	Ornithorhynchus_anatinus
ENSSLDG00000014113	zgc:56699	93	55.689	ENSORLG00000025877	-	99	55.689	Oryzias_latipes
ENSSLDG00000014113	zgc:56699	99	54.444	ENSORLG00000015258	-	99	54.444	Oryzias_latipes
ENSSLDG00000014113	zgc:56699	93	55.689	ENSORLG00020011013	-	99	55.689	Oryzias_latipes_hni
ENSSLDG00000014113	zgc:56699	99	53.889	ENSORLG00020010990	-	99	53.889	Oryzias_latipes_hni
ENSSLDG00000014113	zgc:56699	99	53.889	ENSORLG00015004961	zgc:56699	99	53.889	Oryzias_latipes_hsok
ENSSLDG00000014113	zgc:56699	99	61.236	ENSOMEG00000021773	-	99	61.236	Oryzias_melastigma
ENSSLDG00000014113	zgc:56699	99	56.425	ENSOMEG00000021739	-	99	56.425	Oryzias_melastigma
ENSSLDG00000014113	zgc:56699	90	45.000	ENSOMEG00000013200	-	92	53.103	Oryzias_melastigma
ENSSLDG00000014113	zgc:56699	96	47.727	ENSPKIG00000017039	zgc:56699	98	47.727	Paramormyrops_kingsleyae
ENSSLDG00000014113	zgc:56699	98	67.785	ENSPMGG00000023241	zgc:56699	99	67.785	Periophthalmus_magnuspinnatus
ENSSLDG00000014113	zgc:56699	62	43.333	ENSPMAG00000009653	-	93	43.333	Petromyzon_marinus
ENSSLDG00000014113	zgc:56699	52	39.241	ENSPCIG00000006734	-	99	39.241	Phascolarctos_cinereus
ENSSLDG00000014113	zgc:56699	98	69.492	ENSPFOG00000009204	zgc:56699	99	69.492	Poecilia_formosa
ENSSLDG00000014113	zgc:56699	97	68.243	ENSPLAG00000009088	zgc:56699	98	68.243	Poecilia_latipinna
ENSSLDG00000014113	zgc:56699	98	69.492	ENSPMEG00000001443	zgc:56699	99	69.492	Poecilia_mexicana
ENSSLDG00000014113	zgc:56699	98	70.056	ENSPREG00000000745	zgc:56699	99	70.056	Poecilia_reticulata
ENSSLDG00000014113	zgc:56699	99	67.778	ENSPNYG00000002811	zgc:56699	100	67.778	Pundamilia_nyererei
ENSSLDG00000014113	zgc:56699	96	58.989	ENSPNAG00000005165	zgc:56699	98	58.989	Pygocentrus_nattereri
ENSSLDG00000014113	zgc:56699	98	52.514	ENSSFOG00015021600	zgc:56699	99	52.514	Scleropages_formosus
ENSSLDG00000014113	zgc:56699	99	69.274	ENSSMAG00000020886	zgc:56699	99	69.274	Scophthalmus_maximus
ENSSLDG00000014113	zgc:56699	100	99.342	ENSSDUG00000002033	zgc:56699	100	99.342	Seriola_dumerili
ENSSLDG00000014113	zgc:56699	84	56.410	ENSSPAG00000010005	-	99	56.410	Stegastes_partitus
ENSSLDG00000014113	zgc:56699	96	69.186	ENSSPAG00000019854	-	97	69.767	Stegastes_partitus
ENSSLDG00000014113	zgc:56699	98	56.497	ENSTRUG00000015537	zgc:56699	99	56.497	Takifugu_rubripes
ENSSLDG00000014113	zgc:56699	81	60.274	ENSTNIG00000012515	zgc:56699	97	60.274	Tetraodon_nigroviridis
ENSSLDG00000014113	zgc:56699	97	64.571	ENSXCOG00000014400	zgc:56699	87	64.571	Xiphophorus_couchianus
ENSSLDG00000014113	zgc:56699	97	70.857	ENSXMAG00000011692	zgc:56699	98	70.857	Xiphophorus_maculatus