EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000014156 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
7313 bases
Position
chrPEQF01098955.1:3173437-3180749
Accession
111659242
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000017986PABPPF00658.184.8e-3211
ENSSLDP00000017986RRM_5PF13893.66e-0711
ENSSLDP00000017986RRM_1PF00076.221.2e-8614
ENSSLDP00000017986RRM_1PF00076.221.2e-8624
ENSSLDP00000017986RRM_1PF00076.221.2e-8634
ENSSLDP00000017986RRM_1PF00076.221.2e-8644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000018599-3332XM_023412106ENSSLDP00000017986638 (aa)XP_023267874UPI000BBE7536
Gene Model
Click here to download ENSSLDG00000014156's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014156's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000014156pabpc1b5930.159ENSSLDG00000015784-5730.366
ENSSLDG00000014156pabpc1b5931.868ENSSLDG00000014625-7031.183
ENSSLDG00000014156pabpc1b10090.202ENSSLDG00000011661pabpc1a10090.202
ENSSLDG00000014156pabpc1b6032.632ENSSLDG00000013224-5032.632
ENSSLDG00000014156pabpc1b5937.349ENSSLDG00000008455ELAVL29237.349
ENSSLDG00000014156pabpc1b9975.197ENSSLDG00000013025pabpc49975.353
ENSSLDG00000014156pabpc1b5837.333ENSSLDG00000025413rbm196137.333
ENSSLDG00000014156pabpc1b5937.349ENSSLDG00000013769elavl39237.349
ENSSLDG00000014156pabpc1b5373.529ENSSLDG00000002735-9473.529
ENSSLDG00000014156pabpc1b5996.429ENSSLDG00000009165-9996.429
ENSSLDG00000014156pabpc1b5936.145ENSSLDG00000005260elavl48136.145
ENSSLDG00000014156pabpc1b9870.638ENSSLDG00000006981pabpc1l9885.167
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000014156pabpc1b5879.592ENSG00000186288PABPC1L2A9879.592Homo_sapiens
ENSSLDG00000014156pabpc1b5879.592ENSG00000184388PABPC1L2B9879.592Homo_sapiens
ENSSLDG00000014156pabpc1b10090.358ENSAPOG00000015105pabpc1a10090.202Acanthochromis_polyacanthus
ENSSLDG00000014156pabpc1b10097.809ENSAPOG00000017776pabpc1b10097.809Acanthochromis_polyacanthus
ENSSLDG00000014156pabpc1b6079.592ENSAMEG00000019441-9879.592Ailuropoda_melanoleuca
ENSSLDG00000014156pabpc1b10091.080ENSACIG00000018366pabpc1b10091.080Amphilophus_citrinellus
ENSSLDG00000014156pabpc1b10090.358ENSACIG00000004685pabpc1a10090.202Amphilophus_citrinellus
ENSSLDG00000014156pabpc1b10097.027ENSAOCG00000019839pabpc1b10097.027Amphiprion_ocellaris
ENSSLDG00000014156pabpc1b10089.564ENSAOCG00000011656pabpc1a10089.891Amphiprion_ocellaris
ENSSLDG00000014156pabpc1b10089.564ENSAPEG00000006963pabpc1a10089.891Amphiprion_percula
ENSSLDG00000014156pabpc1b10097.027ENSAPEG00000010435pabpc1b10097.027Amphiprion_percula
ENSSLDG00000014156pabpc1b10097.036ENSATEG00000012917pabpc1b10097.036Anabas_testudineus
ENSSLDG00000014156pabpc1b10089.875ENSATEG00000024852pabpc1a10090.202Anabas_testudineus
ENSSLDG00000014156pabpc1b5879.592ENSANAG00000019431-9879.592Aotus_nancymaae
ENSSLDG00000014156pabpc1b5879.592ENSANAG00000019429-9879.592Aotus_nancymaae
ENSSLDG00000014156pabpc1b10095.775ENSACLG00000014335pabpc1b10095.775Astatotilapia_calliptera
ENSSLDG00000014156pabpc1b10090.202ENSACLG00000009399pabpc1a10090.271Astatotilapia_calliptera
ENSSLDG00000014156pabpc1b10094.531ENSAMXG00000008599pabpc1b10094.531Astyanax_mexicanus
ENSSLDG00000014156pabpc1b6076.555ENSBTAG00000052491-9876.555Bos_taurus
ENSSLDG00000014156pabpc1b6078.537ENSBTAG00000050902-9878.537Bos_taurus
ENSSLDG00000014156pabpc1b5879.592ENSCJAG00000041326-9879.592Callithrix_jacchus
ENSSLDG00000014156pabpc1b6078.537ENSCAFG00020002052-9878.537Canis_lupus_dingo
ENSSLDG00000014156pabpc1b5879.592ENSCHIG00000011138-9879.592Capra_hircus
ENSSLDG00000014156pabpc1b5879.592ENSCHIG00000006283-9879.592Capra_hircus
ENSSLDG00000014156pabpc1b5879.592ENSTSYG00000001775-9879.592Carlito_syrichta
ENSSLDG00000014156pabpc1b6079.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSSLDG00000014156pabpc1b5879.592ENSCCAG00000031524-9879.592Cebus_capucinus
ENSSLDG00000014156pabpc1b5879.592ENSCATG00000042826-9879.592Cercocebus_atys
ENSSLDG00000014156pabpc1b5879.592ENSCATG00000043125-9879.592Cercocebus_atys
ENSSLDG00000014156pabpc1b5877.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSSLDG00000014156pabpc1b5877.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSSLDG00000014156pabpc1b6079.592ENSCSAG00000000102-9879.592Chlorocebus_sabaeus
ENSSLDG00000014156pabpc1b5879.558ENSCGRG00001023387-9676.923Cricetulus_griseus_chok1gshd
ENSSLDG00000014156pabpc1b10091.862ENSCSEG00000015241-10091.862Cynoglossus_semilaevis
ENSSLDG00000014156pabpc1b9989.748ENSCSEG00000013324pabpc1a9990.079Cynoglossus_semilaevis
ENSSLDG00000014156pabpc1b10089.891ENSCVAG00000021872pabpc1a10089.580Cyprinodon_variegatus
ENSSLDG00000014156pabpc1b10093.281ENSCVAG00000005489pabpc1b10093.281Cyprinodon_variegatus
ENSSLDG00000014156pabpc1b10090.796ENSDARG00000017219pabpc1a10090.796Danio_rerio
ENSSLDG00000014156pabpc1b10094.844ENSDARG00000021140pabpc1b10095.312Danio_rerio
ENSSLDG00000014156pabpc1b6079.894ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSSLDG00000014156pabpc1b5877.041ENSDORG00000011362-9877.041Dipodomys_ordii
ENSSLDG00000014156pabpc1b6078.155ENSEASG00005010399-9878.155Equus_asinus_asinus
ENSSLDG00000014156pabpc1b6078.155ENSECAG00000002620-9878.155Equus_caballus
ENSSLDG00000014156pabpc1b6075.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSSLDG00000014156pabpc1b9991.549ENSELUG00000003614pabpc1a10091.393Esox_lucius
ENSSLDG00000014156pabpc1b6059.483ENSELUG00000005389-9759.483Esox_lucius
ENSSLDG00000014156pabpc1b10092.175ENSELUG00000015062-10092.175Esox_lucius
ENSSLDG00000014156pabpc1b5879.592ENSFCAG00000039701-9879.592Felis_catus
ENSSLDG00000014156pabpc1b6079.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSSLDG00000014156pabpc1b10089.580ENSFHEG00000018979pabpc1a10089.736Fundulus_heteroclitus
ENSSLDG00000014156pabpc1b10093.897ENSFHEG00000008186pabpc1b10093.897Fundulus_heteroclitus
ENSSLDG00000014156pabpc1b10085.317ENSGMOG00000002448-10085.317Gadus_morhua
ENSSLDG00000014156pabpc1b9988.940ENSGMOG00000013448pabpc1a9988.940Gadus_morhua
ENSSLDG00000014156pabpc1b10089.425ENSGAFG00000019750pabpc1a10089.580Gambusia_affinis
ENSSLDG00000014156pabpc1b10095.149ENSGAFG00000010193pabpc1b10095.149Gambusia_affinis
ENSSLDG00000014156pabpc1b10093.045ENSGACG00000003771pabpc1b10093.354Gasterosteus_aculeatus
ENSSLDG00000014156pabpc1b10090.202ENSGACG00000003572pabpc1a10090.047Gasterosteus_aculeatus
ENSSLDG00000014156pabpc1b5879.592ENSGGOG00000038606-9879.592Gorilla_gorilla
ENSSLDG00000014156pabpc1b5879.592ENSGGOG00000043933-9879.592Gorilla_gorilla
ENSSLDG00000014156pabpc1b10095.775ENSHBUG00000002075pabpc1b10095.775Haplochromis_burtoni
ENSSLDG00000014156pabpc1b10090.202ENSHBUG00000020487pabpc1a10090.271Haplochromis_burtoni
ENSSLDG00000014156pabpc1b5878.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSSLDG00000014156pabpc1b5878.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSSLDG00000014156pabpc1b5878.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSSLDG00000014156pabpc1b9870.860ENSHCOG00000003175pabpc1b9970.860Hippocampus_comes
ENSSLDG00000014156pabpc1b10089.564ENSHCOG00000013502pabpc1a10089.891Hippocampus_comes
ENSSLDG00000014156pabpc1b7456.061ENSIPUG00000018724-7656.061Ictalurus_punctatus
ENSSLDG00000014156pabpc1b10088.281ENSIPUG00000008848pabpc1a10088.594Ictalurus_punctatus
ENSSLDG00000014156pabpc1b7554.959ENSIPUG00000021244-6554.959Ictalurus_punctatus
ENSSLDG00000014156pabpc1b10087.480ENSIPUG00000010791-10087.480Ictalurus_punctatus
ENSSLDG00000014156pabpc1b6079.082ENSSTOG00000022096-9879.082Ictidomys_tridecemlineatus
ENSSLDG00000014156pabpc1b6079.082ENSSTOG00000026028-9879.082Ictidomys_tridecemlineatus
ENSSLDG00000014156pabpc1b5878.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSSLDG00000014156pabpc1b10090.047ENSKMAG00000000605pabpc1a10089.736Kryptolebias_marmoratus
ENSSLDG00000014156pabpc1b10093.574ENSKMAG00000008049pabpc1b10093.897Kryptolebias_marmoratus
ENSSLDG00000014156pabpc1b10090.202ENSLBEG00000024002-10090.047Labrus_bergylta
ENSSLDG00000014156pabpc1b10095.768ENSLBEG00000026845pabpc1b10095.768Labrus_bergylta
ENSSLDG00000014156pabpc1b6078.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSSLDG00000014156pabpc1b5879.188ENSMFAG00000028878-9879.188Macaca_fascicularis
ENSSLDG00000014156pabpc1b5879.592ENSMMUG00000039929-9879.592Macaca_mulatta
ENSSLDG00000014156pabpc1b5879.592ENSMMUG00000009740-9879.592Macaca_mulatta
ENSSLDG00000014156pabpc1b5879.592ENSMMUG00000037681-9879.592Macaca_mulatta
ENSSLDG00000014156pabpc1b5879.592ENSMNEG00000037732-9879.592Macaca_nemestrina
ENSSLDG00000014156pabpc1b5879.592ENSMLEG00000027495-9879.592Mandrillus_leucophaeus
ENSSLDG00000014156pabpc1b10089.736ENSMAMG00000004502-10089.891Mastacembelus_armatus
ENSSLDG00000014156pabpc1b10096.557ENSMAMG00000014610pabpc1b10096.557Mastacembelus_armatus
ENSSLDG00000014156pabpc1b10090.202ENSMZEG00005025416pabpc1a10090.271Maylandia_zebra
ENSSLDG00000014156pabpc1b10095.775ENSMZEG00005026745pabpc1b10095.775Maylandia_zebra
ENSSLDG00000014156pabpc1b5879.592ENSMICG00000047642-9879.592Microcebus_murinus
ENSSLDG00000014156pabpc1b10088.408ENSMMOG00000018044pabpc1a10091.743Mola_mola
ENSSLDG00000014156pabpc1b10089.185ENSMMOG00000018009pabpc1b10089.185Mola_mola
ENSSLDG00000014156pabpc1b9966.562ENSMODG00000015024-9966.562Monodelphis_domestica
ENSSLDG00000014156pabpc1b9873.291ENSMODG00000013156-9873.460Monodelphis_domestica
ENSSLDG00000014156pabpc1b10089.564ENSMALG00000013020-10089.891Monopterus_albus
ENSSLDG00000014156pabpc1b10088.871ENSMALG00000006066pabpc1b10090.125Monopterus_albus
ENSSLDG00000014156pabpc1b5881.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSSLDG00000014156pabpc1b10095.618ENSNBRG00000013737pabpc1b10095.618Neolamprologus_brichardi
ENSSLDG00000014156pabpc1b10090.358ENSNBRG00000003068-10090.271Neolamprologus_brichardi
ENSSLDG00000014156pabpc1b5879.592ENSNLEG00000018128-9879.592Nomascus_leucogenys
ENSSLDG00000014156pabpc1b5879.082ENSODEG00000018540-9879.082Octodon_degus
ENSSLDG00000014156pabpc1b10090.047ENSONIG00000006871-10089.891Oreochromis_niloticus
ENSSLDG00000014156pabpc1b10095.775ENSONIG00000002717pabpc1b10095.775Oreochromis_niloticus
ENSSLDG00000014156pabpc1b6079.592ENSOCUG00000002565-9879.592Oryctolagus_cuniculus
ENSSLDG00000014156pabpc1b9992.723ENSORLG00000002691pabpc1a9694.595Oryzias_latipes
ENSSLDG00000014156pabpc1b10087.167ENSORLG00000003008-10087.167Oryzias_latipes
ENSSLDG00000014156pabpc1b10088.629ENSORLG00020022398pabpc1a10088.958Oryzias_latipes_hni
ENSSLDG00000014156pabpc1b10087.011ENSORLG00020022259-10087.011Oryzias_latipes_hni
ENSSLDG00000014156pabpc1b10087.480ENSORLG00015010932-10087.480Oryzias_latipes_hsok
ENSSLDG00000014156pabpc1b10088.474ENSORLG00015013633pabpc110088.802Oryzias_latipes_hsok
ENSSLDG00000014156pabpc1b10089.097ENSOMEG00000020219pabpc1a10089.425Oryzias_melastigma
ENSSLDG00000014156pabpc1b9683.710ENSOMEG00000013627pabpc1b10083.710Oryzias_melastigma
ENSSLDG00000014156pabpc1b6079.592ENSOGAG00000026047-9879.592Otolemur_garnettii
ENSSLDG00000014156pabpc1b6079.592ENSOGAG00000029513-9879.592Otolemur_garnettii
ENSSLDG00000014156pabpc1b6079.592ENSOARG00000005943-9879.592Ovis_aries
ENSSLDG00000014156pabpc1b5879.592ENSPPAG00000012920-9879.592Pan_paniscus
ENSSLDG00000014156pabpc1b6079.592ENSPPRG00000011809-9879.592Panthera_pardus
ENSSLDG00000014156pabpc1b6079.592ENSPPRG00000011804-9879.592Panthera_pardus
ENSSLDG00000014156pabpc1b5879.592ENSPTRG00000028252-9879.592Pan_troglodytes
ENSSLDG00000014156pabpc1b5879.592ENSPANG00000011549-9879.592Papio_anubis
ENSSLDG00000014156pabpc1b10095.469ENSPKIG00000005676pabpc1b10095.469Paramormyrops_kingsleyae
ENSSLDG00000014156pabpc1b7193.348ENSPMGG00000023134-9793.348Periophthalmus_magnuspinnatus
ENSSLDG00000014156pabpc1b7192.239ENSPMGG00000022487pabpc1a9292.239Periophthalmus_magnuspinnatus
ENSSLDG00000014156pabpc1b9971.136ENSPCIG00000016995-5471.136Phascolarctos_cinereus
ENSSLDG00000014156pabpc1b10088.244ENSPFOG00000010815pabpc1a10088.397Poecilia_formosa
ENSSLDG00000014156pabpc1b10094.836ENSPFOG00000005917pabpc1b10094.836Poecilia_formosa
ENSSLDG00000014156pabpc1b10095.149ENSPLAG00000001388pabpc1b10095.149Poecilia_latipinna
ENSSLDG00000014156pabpc1b10089.891ENSPLAG00000004114pabpc1a10090.047Poecilia_latipinna
ENSSLDG00000014156pabpc1b10089.891ENSPMEG00000001334pabpc1a10090.047Poecilia_mexicana
ENSSLDG00000014156pabpc1b10094.836ENSPMEG00000014399pabpc1b10094.836Poecilia_mexicana
ENSSLDG00000014156pabpc1b9989.819ENSPREG00000019595pabpc1a10089.819Poecilia_reticulata
ENSSLDG00000014156pabpc1b10095.149ENSPREG00000010911pabpc1b10095.149Poecilia_reticulata
ENSSLDG00000014156pabpc1b6079.592ENSPPYG00000020468-9879.592Pongo_abelii
ENSSLDG00000014156pabpc1b6079.592ENSPCAG00000005308-9879.592Procavia_capensis
ENSSLDG00000014156pabpc1b5879.082ENSPCOG00000026349-9879.082Propithecus_coquereli
ENSSLDG00000014156pabpc1b6080.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSSLDG00000014156pabpc1b10095.775ENSPNYG00000012578pabpc1b10095.775Pundamilia_nyererei
ENSSLDG00000014156pabpc1b10090.202ENSPNYG00000005192pabpc1a10090.047Pundamilia_nyererei
ENSSLDG00000014156pabpc1b10090.640ENSPNAG00000028408pabpc1a10090.640Pygocentrus_nattereri
ENSSLDG00000014156pabpc1b10094.219ENSPNAG00000024626pabpc1b10094.219Pygocentrus_nattereri
ENSSLDG00000014156pabpc1b8989.352ENSRBIG00000028738-9589.352Rhinopithecus_bieti
ENSSLDG00000014156pabpc1b5879.592ENSRBIG00000027173-9879.592Rhinopithecus_bieti
ENSSLDG00000014156pabpc1b5879.592ENSRROG00000017404-9879.592Rhinopithecus_roxellana
ENSSLDG00000014156pabpc1b9863.317ENSSHAG00000000511-10063.317Sarcophilus_harrisii
ENSSLDG00000014156pabpc1b10090.938ENSSFOG00015006662pabpc1a10090.938Scleropages_formosus
ENSSLDG00000014156pabpc1b7080.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSSLDG00000014156pabpc1b10094.836ENSSFOG00015002752-10094.836Scleropages_formosus
ENSSLDG00000014156pabpc1b10095.775ENSSMAG00000006869pabpc1b10095.775Scophthalmus_maximus
ENSSLDG00000014156pabpc1b10089.580ENSSMAG00000010803pabpc1a10089.425Scophthalmus_maximus
ENSSLDG00000014156pabpc1b10096.708ENSSDUG00000011965pabpc1b10096.708Seriola_dumerili
ENSSLDG00000014156pabpc1b10090.202ENSSDUG00000006675pabpc1a10090.202Seriola_dumerili
ENSSLDG00000014156pabpc1b10097.962ENSSPAG00000019265pabpc1b10097.962Stegastes_partitus
ENSSLDG00000014156pabpc1b10090.031ENSSPAG00000014453-10090.358Stegastes_partitus
ENSSLDG00000014156pabpc1b5879.592ENSSSCG00000032167-9879.592Sus_scrofa
ENSSLDG00000014156pabpc1b5879.592ENSSSCG00000036336-9879.592Sus_scrofa
ENSSLDG00000014156pabpc1b10090.625ENSTRUG00000003767-10090.781Takifugu_rubripes
ENSSLDG00000014156pabpc1b10089.580ENSTRUG00000011577-10089.580Takifugu_rubripes
ENSSLDG00000014156pabpc1b10086.350ENSTNIG00000013307pabpc1a10086.350Tetraodon_nigroviridis
ENSSLDG00000014156pabpc1b10090.669ENSTNIG00000009153pabpc1b10090.669Tetraodon_nigroviridis
ENSSLDG00000014156pabpc1b6079.592ENSTTRG00000013181-9879.592Tursiops_truncatus
ENSSLDG00000014156pabpc1b5879.592ENSUAMG00000008089-9879.592Ursus_americanus
ENSSLDG00000014156pabpc1b5879.592ENSUMAG00000003364-9879.592Ursus_maritimus
ENSSLDG00000014156pabpc1b9753.150ENSUMAG00000023926-8966.485Ursus_maritimus
ENSSLDG00000014156pabpc1b5978.500ENSVVUG00000015892-9778.500Vulpes_vulpes
ENSSLDG00000014156pabpc1b9945.536ENSXETG00000015439-10045.312Xenopus_tropicalis
ENSSLDG00000014156pabpc1b10090.439ENSXCOG00000019901pabpc1b10090.596Xiphophorus_couchianus
ENSSLDG00000014156pabpc1b10086.364ENSXCOG00000017066pabpc1a10086.677Xiphophorus_couchianus
ENSSLDG00000014156pabpc1b10089.891ENSXMAG00000002555pabpc1a10090.047Xiphophorus_maculatus
ENSSLDG00000014156pabpc1b10094.992ENSXMAG00000003753pabpc1b10094.992Xiphophorus_maculatus

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