EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014174 (Gene tree)
Gene ID: -
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3591 bases
Position: chrPEQF01098944.1:551461-555051
Accession: 111658776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000017985	HVSL	PF09749.9	1.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018598	-	1319	XM_023411438	ENSSLDP00000017985	280 (aa)	XP_023267206	UPI000C6F5372

Gene Model

Click here to download ENSSLDG00000014174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014174	usb1	80	53.982	ENSG00000103005	USB1	100	55.140	Homo_sapiens
ENSSLDG00000014174	usb1	100	72.143	ENSAPOG00000011942	usb1	100	72.143	Acanthochromis_polyacanthus
ENSSLDG00000014174	usb1	80	55.357	ENSAMEG00000017205	USB1	83	55.357	Ailuropoda_melanoleuca
ENSSLDG00000014174	usb1	100	71.678	ENSACIG00000012234	usb1	100	73.214	Amphilophus_citrinellus
ENSSLDG00000014174	usb1	99	75.089	ENSAOCG00000014831	usb1	99	75.445	Amphiprion_ocellaris
ENSSLDG00000014174	usb1	99	75.445	ENSAPEG00000000296	usb1	99	75.445	Amphiprion_percula
ENSSLDG00000014174	usb1	99	81.429	ENSATEG00000009348	usb1	99	81.429	Anabas_testudineus
ENSSLDG00000014174	usb1	79	58.222	ENSAPLG00000002756	USB1	99	58.667	Anas_platyrhynchos
ENSSLDG00000014174	usb1	79	53.333	ENSACAG00000015481	USB1	98	53.333	Anolis_carolinensis
ENSSLDG00000014174	usb1	99	48.387	ENSANAG00000035640	USB1	98	46.316	Aotus_nancymaae
ENSSLDG00000014174	usb1	90	78.571	ENSACLG00000020586	usb1	100	75.000	Astatotilapia_calliptera
ENSSLDG00000014174	usb1	80	66.071	ENSAMXG00000040146	usb1	74	66.071	Astyanax_mexicanus
ENSSLDG00000014174	usb1	99	49.462	ENSBTAG00000015758	USB1	85	55.357	Bos_taurus
ENSSLDG00000014174	usb1	80	54.867	ENSCJAG00000011733	USB1	98	49.811	Callithrix_jacchus
ENSSLDG00000014174	usb1	99	48.201	ENSCAFG00000008556	USB1	60	54.709	Canis_familiaris
ENSSLDG00000014174	usb1	99	49.286	ENSCAFG00020009263	USB1	84	54.709	Canis_lupus_dingo
ENSSLDG00000014174	usb1	99	49.104	ENSCHIG00000024290	USB1	98	49.421	Capra_hircus
ENSSLDG00000014174	usb1	80	53.571	ENSTSYG00000006997	USB1	85	53.571	Carlito_syrichta
ENSSLDG00000014174	usb1	81	44.053	ENSCAPG00000009057	USB1	97	44.053	Cavia_aperea
ENSSLDG00000014174	usb1	99	48.070	ENSCPOG00000014325	USB1	85	54.626	Cavia_porcellus
ENSSLDG00000014174	usb1	99	49.104	ENSCCAG00000022132	USB1	98	47.018	Cebus_capucinus
ENSSLDG00000014174	usb1	80	54.867	ENSCATG00000032174	USB1	98	49.807	Cercocebus_atys
ENSSLDG00000014174	usb1	61	54.335	ENSCLAG00000007363	USB1	87	56.209	Chinchilla_lanigera
ENSSLDG00000014174	usb1	80	54.425	ENSCSAG00000004783	USB1	85	54.425	Chlorocebus_sabaeus
ENSSLDG00000014174	usb1	79	59.193	ENSCPBG00000026943	USB1	80	59.193	Chrysemys_picta_bellii
ENSSLDG00000014174	usb1	80	33.190	ENSCING00000011490	-	87	32.174	Ciona_intestinalis
ENSSLDG00000014174	usb1	80	31.330	ENSCSAVG00000000894	-	84	31.330	Ciona_savignyi
ENSSLDG00000014174	usb1	80	55.310	ENSCANG00000037135	USB1	99	50.192	Colobus_angolensis_palliatus
ENSSLDG00000014174	usb1	99	50.709	ENSCGRG00001011243	USB1	99	49.064	Cricetulus_griseus_chok1gshd
ENSSLDG00000014174	usb1	99	50.709	ENSCGRG00000013252	USB1	99	49.064	Cricetulus_griseus_crigri
ENSSLDG00000014174	usb1	99	71.326	ENSCSEG00000013881	usb1	89	74.494	Cynoglossus_semilaevis
ENSSLDG00000014174	usb1	80	76.211	ENSCVAG00000009252	usb1	97	76.211	Cyprinodon_variegatus
ENSSLDG00000014174	usb1	80	62.054	ENSDARG00000003841	usb1	81	62.054	Danio_rerio
ENSSLDG00000014174	usb1	80	53.571	ENSDORG00000001888	Usb1	85	53.571	Dipodomys_ordii
ENSSLDG00000014174	usb1	75	40.278	FBgn0037713	CG16790	81	38.967	Drosophila_melanogaster
ENSSLDG00000014174	usb1	99	41.935	ENSETEG00000019682	USB1	95	43.083	Echinops_telfairi
ENSSLDG00000014174	usb1	90	42.279	ENSEBUG00000005889	usb1	86	42.435	Eptatretus_burgeri
ENSSLDG00000014174	usb1	99	49.104	ENSEASG00005005484	USB1	99	48.864	Equus_asinus_asinus
ENSSLDG00000014174	usb1	99	49.281	ENSECAG00000019493	USB1	91	49.049	Equus_caballus
ENSSLDG00000014174	usb1	61	50.289	ENSEEUG00000000154	USB1	58	50.980	Erinaceus_europaeus
ENSSLDG00000014174	usb1	92	60.618	ENSELUG00000010974	usb1	94	60.618	Esox_lucius
ENSSLDG00000014174	usb1	83	52.137	ENSFCAG00000002693	USB1	98	48.679	Felis_catus
ENSSLDG00000014174	usb1	82	56.522	ENSFALG00000006876	USB1	98	52.471	Ficedula_albicollis
ENSSLDG00000014174	usb1	99	50.179	ENSFDAG00000010052	USB1	85	54.185	Fukomys_damarensis
ENSSLDG00000014174	usb1	88	70.732	ENSFHEG00000012334	usb1	97	71.138	Fundulus_heteroclitus
ENSSLDG00000014174	usb1	80	72.197	ENSGMOG00000004228	usb1	100	72.197	Gadus_morhua
ENSSLDG00000014174	usb1	79	58.296	ENSGALG00000035604	USB1	88	58.482	Gallus_gallus
ENSSLDG00000014174	usb1	100	73.310	ENSGAFG00000021890	usb1	91	75.494	Gambusia_affinis
ENSSLDG00000014174	usb1	99	76.703	ENSGACG00000003257	usb1	91	80.556	Gasterosteus_aculeatus
ENSSLDG00000014174	usb1	99	53.237	ENSGAGG00000022572	USB1	82	59.193	Gopherus_agassizii
ENSSLDG00000014174	usb1	80	54.425	ENSGGOG00000017147	USB1	85	54.425	Gorilla_gorilla
ENSSLDG00000014174	usb1	100	75.972	ENSHBUG00000009823	usb1	100	75.972	Haplochromis_burtoni
ENSSLDG00000014174	usb1	99	49.640	ENSHGLG00000016078	USB1	82	55.157	Heterocephalus_glaber_female
ENSSLDG00000014174	usb1	99	49.640	ENSHGLG00100005562	USB1	82	55.157	Heterocephalus_glaber_male
ENSSLDG00000014174	usb1	78	74.429	ENSHCOG00000015633	usb1	87	75.000	Hippocampus_comes
ENSSLDG00000014174	usb1	99	55.903	ENSIPUG00000008601	usb1	80	63.319	Ictalurus_punctatus
ENSSLDG00000014174	usb1	83	53.648	ENSSTOG00000007548	USB1	84	54.825	Ictidomys_tridecemlineatus
ENSSLDG00000014174	usb1	99	48.746	ENSJJAG00000021859	Usb1	84	55.357	Jaculus_jaculus
ENSSLDG00000014174	usb1	85	78.992	ENSKMAG00000007200	usb1	84	78.992	Kryptolebias_marmoratus
ENSSLDG00000014174	usb1	88	74.699	ENSLBEG00000008452	usb1	78	74.699	Labrus_bergylta
ENSSLDG00000014174	usb1	68	58.639	ENSLACG00000000105	USB1	66	59.686	Latimeria_chalumnae
ENSSLDG00000014174	usb1	80	58.482	ENSLOCG00000000465	usb1	79	58.482	Lepisosteus_oculatus
ENSSLDG00000014174	usb1	99	41.259	ENSLAFG00000002267	USB1	83	45.133	Loxodonta_africana
ENSSLDG00000014174	usb1	80	54.867	ENSMFAG00000003926	USB1	98	49.807	Macaca_fascicularis
ENSSLDG00000014174	usb1	80	54.867	ENSMMUG00000022669	USB1	98	49.807	Macaca_mulatta
ENSSLDG00000014174	usb1	80	54.425	ENSMNEG00000042487	USB1	98	49.421	Macaca_nemestrina
ENSSLDG00000014174	usb1	80	54.867	ENSMLEG00000028756	USB1	98	49.807	Mandrillus_leucophaeus
ENSSLDG00000014174	usb1	99	79.570	ENSMAMG00000015092	usb1	99	79.570	Mastacembelus_armatus
ENSSLDG00000014174	usb1	100	75.265	ENSMZEG00005010008	usb1	100	75.265	Maylandia_zebra
ENSSLDG00000014174	usb1	99	48.746	ENSMAUG00000007832	Usb1	84	54.464	Mesocricetus_auratus
ENSSLDG00000014174	usb1	80	55.357	ENSMICG00000004900	USB1	85	55.357	Microcebus_murinus
ENSSLDG00000014174	usb1	99	49.462	ENSMOCG00000022647	Usb1	84	55.357	Microtus_ochrogaster
ENSSLDG00000014174	usb1	81	78.761	ENSMMOG00000000490	usb1	88	79.111	Mola_mola
ENSSLDG00000014174	usb1	88	50.000	ENSMODG00000014067	USB1	98	48.872	Monodelphis_domestica
ENSSLDG00000014174	usb1	100	79.433	ENSMALG00000005930	usb1	100	79.433	Monopterus_albus
ENSSLDG00000014174	usb1	99	49.104	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSSLDG00000014174	usb1	99	48.763	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSSLDG00000014174	usb1	99	49.470	MGP_PahariEiJ_G0023019	Usb1	100	52.991	Mus_pahari
ENSSLDG00000014174	usb1	99	49.104	MGP_SPRETEiJ_G0032540	Usb1	95	50.593	Mus_spretus
ENSSLDG00000014174	usb1	80	54.018	ENSMPUG00000004684	USB1	80	54.018	Mustela_putorius_furo
ENSSLDG00000014174	usb1	80	55.804	ENSMLUG00000007400	USB1	97	55.804	Myotis_lucifugus
ENSSLDG00000014174	usb1	80	56.250	ENSNGAG00000009703	Usb1	83	56.250	Nannospalax_galili
ENSSLDG00000014174	usb1	100	69.825	ENSNBRG00000008747	usb1	100	76.636	Neolamprologus_brichardi
ENSSLDG00000014174	usb1	74	55.556	ENSNLEG00000003340	USB1	83	55.556	Nomascus_leucogenys
ENSSLDG00000014174	usb1	99	49.640	ENSODEG00000016214	USB1	84	55.556	Octodon_degus
ENSSLDG00000014174	usb1	99	75.887	ENSONIG00000011063	usb1	89	80.080	Oreochromis_niloticus
ENSSLDG00000014174	usb1	80	55.111	ENSOANG00000012118	USB1	94	55.111	Ornithorhynchus_anatinus
ENSSLDG00000014174	usb1	85	77.824	ENSORLG00000012479	usb1	88	77.824	Oryzias_latipes
ENSSLDG00000014174	usb1	85	76.987	ENSORLG00020018671	usb1	88	76.987	Oryzias_latipes_hni
ENSSLDG00000014174	usb1	85	78.243	ENSORLG00015009679	usb1	89	78.243	Oryzias_latipes_hsok
ENSSLDG00000014174	usb1	99	74.910	ENSOMEG00000012930	usb1	99	74.910	Oryzias_melastigma
ENSSLDG00000014174	usb1	85	49.180	ENSOGAG00000003273	USB1	94	48.207	Otolemur_garnettii
ENSSLDG00000014174	usb1	80	55.357	ENSOARG00000001107	USB1	86	55.357	Ovis_aries
ENSSLDG00000014174	usb1	80	53.982	ENSPPAG00000042137	USB1	85	53.982	Pan_paniscus
ENSSLDG00000014174	usb1	83	51.709	ENSPPRG00000024797	USB1	98	48.669	Panthera_pardus
ENSSLDG00000014174	usb1	83	51.282	ENSPTIG00000007506	USB1	98	48.289	Panthera_tigris_altaica
ENSSLDG00000014174	usb1	76	55.607	ENSPTRG00000008172	USB1	100	55.607	Pan_troglodytes
ENSSLDG00000014174	usb1	80	54.867	ENSPANG00000025138	USB1	98	49.807	Papio_anubis
ENSSLDG00000014174	usb1	80	64.000	ENSPKIG00000015109	usb1	76	64.000	Paramormyrops_kingsleyae
ENSSLDG00000014174	usb1	80	47.807	ENSPSIG00000004305	USB1	100	47.807	Pelodiscus_sinensis
ENSSLDG00000014174	usb1	79	70.721	ENSPMGG00000017725	usb1	85	70.721	Periophthalmus_magnuspinnatus
ENSSLDG00000014174	usb1	80	54.018	ENSPEMG00000016183	Usb1	82	54.018	Peromyscus_maniculatus_bairdii
ENSSLDG00000014174	usb1	79	52.000	ENSPMAG00000000462	usb1	95	52.000	Petromyzon_marinus
ENSSLDG00000014174	usb1	100	74.021	ENSPFOG00000011130	usb1	99	72.954	Poecilia_formosa
ENSSLDG00000014174	usb1	100	73.665	ENSPLAG00000009820	usb1	99	72.598	Poecilia_latipinna
ENSSLDG00000014174	usb1	100	74.021	ENSPMEG00000006402	usb1	91	75.984	Poecilia_mexicana
ENSSLDG00000014174	usb1	88	73.171	ENSPREG00000001047	usb1	98	73.577	Poecilia_reticulata
ENSSLDG00000014174	usb1	74	52.404	ENSPPYG00000007401	USB1	83	52.404	Pongo_abelii
ENSSLDG00000014174	usb1	80	54.464	ENSPCOG00000022612	USB1	85	54.464	Propithecus_coquereli
ENSSLDG00000014174	usb1	99	47.670	ENSPVAG00000004613	USB1	95	49.796	Pteropus_vampyrus
ENSSLDG00000014174	usb1	100	75.972	ENSPNYG00000022262	usb1	100	75.972	Pundamilia_nyererei
ENSSLDG00000014174	usb1	80	66.071	ENSPNAG00000011736	usb1	76	66.071	Pygocentrus_nattereri
ENSSLDG00000014174	usb1	99	48.410	ENSRNOG00000013216	Usb1	95	50.198	Rattus_norvegicus
ENSSLDG00000014174	usb1	76	56.075	ENSRBIG00000044466	USB1	100	56.075	Rhinopithecus_bieti
ENSSLDG00000014174	usb1	80	54.867	ENSRROG00000029211	USB1	98	46.718	Rhinopithecus_roxellana
ENSSLDG00000014174	usb1	80	54.867	ENSSBOG00000029362	USB1	85	54.867	Saimiri_boliviensis_boliviensis
ENSSLDG00000014174	usb1	78	51.835	ENSSHAG00000006993	USB1	89	52.679	Sarcophilus_harrisii
ENSSLDG00000014174	usb1	80	66.667	ENSSFOG00015023663	usb1	71	66.667	Scleropages_formosus
ENSSLDG00000014174	usb1	100	79.322	ENSSMAG00000015834	usb1	100	79.322	Scophthalmus_maximus
ENSSLDG00000014174	usb1	100	88.571	ENSSDUG00000002949	usb1	100	88.380	Seriola_dumerili
ENSSLDG00000014174	usb1	76	55.607	ENSSPUG00000006741	USB1	100	55.607	Sphenodon_punctatus
ENSSLDG00000014174	usb1	99	76.325	ENSSPAG00000007484	usb1	99	75.972	Stegastes_partitus
ENSSLDG00000014174	usb1	85	52.101	ENSSSCG00000002807	USB1	88	52.101	Sus_scrofa
ENSSLDG00000014174	usb1	75	59.242	ENSTGUG00000004792	USB1	86	57.919	Taeniopygia_guttata
ENSSLDG00000014174	usb1	99	70.251	ENSTRUG00000021069	usb1	91	74.180	Takifugu_rubripes
ENSSLDG00000014174	usb1	99	60.215	ENSTNIG00000000626	usb1	97	61.923	Tetraodon_nigroviridis
ENSSLDG00000014174	usb1	80	38.393	ENSTBEG00000001507	USB1	97	38.393	Tupaia_belangeri
ENSSLDG00000014174	usb1	80	55.357	ENSUAMG00000016823	USB1	99	48.689	Ursus_americanus
ENSSLDG00000014174	usb1	76	55.607	ENSUMAG00000021369	USB1	100	55.607	Ursus_maritimus
ENSSLDG00000014174	usb1	99	47.842	ENSVVUG00000023700	USB1	99	49.225	Vulpes_vulpes
ENSSLDG00000014174	usb1	77	55.760	ENSXETG00000013795	usb1	89	55.605	Xenopus_tropicalis
ENSSLDG00000014174	usb1	90	76.772	ENSXMAG00000024687	usb1	81	73.092	Xiphophorus_maculatus