EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000014226 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5312 bases
Position: chrPEQF01098955.1:3197766-3203077
Accession: 111659222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018064	RRM_1	PF00076.22	3.1e-39	1	2
ENSSLDP00000018064	RRM_1	PF00076.22	3.1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018679	-	1462	XM_023412080	ENSSLDP00000018064	403 (aa)	XP_023267848	UPI000C6F8610

Gene Model

Click here to download ENSSLDG00000014226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014226	sf3b4	60	97.083	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSSLDG00000014226	sf3b4	100	96.526	ENSAPOG00000017647	sf3b4	100	96.526	Acanthochromis_polyacanthus
ENSSLDG00000014226	sf3b4	60	97.083	ENSAMEG00000010073	SF3B4	57	97.083	Ailuropoda_melanoleuca
ENSSLDG00000014226	sf3b4	100	97.270	ENSAOCG00000019801	sf3b4	100	97.270	Amphiprion_ocellaris
ENSSLDG00000014226	sf3b4	100	97.270	ENSAPEG00000010365	sf3b4	100	97.270	Amphiprion_percula
ENSSLDG00000014226	sf3b4	100	96.774	ENSATEG00000012844	sf3b4	100	96.774	Anabas_testudineus
ENSSLDG00000014226	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	55	98.261	Anolis_carolinensis
ENSSLDG00000014226	sf3b4	60	97.083	ENSANAG00000031025	SF3B4	57	97.083	Aotus_nancymaae
ENSSLDG00000014226	sf3b4	66	95.865	ENSACLG00000014260	sf3b4	66	95.865	Astatotilapia_calliptera
ENSSLDG00000014226	sf3b4	70	93.972	ENSAMXG00000008282	sf3b4	73	93.814	Astyanax_mexicanus
ENSSLDG00000014226	sf3b4	60	97.083	ENSBTAG00000012495	SF3B4	57	97.083	Bos_taurus
ENSSLDG00000014226	sf3b4	53	95.327	ENSBTAG00000012793	-	53	95.327	Bos_taurus
ENSSLDG00000014226	sf3b4	63	73.228	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSSLDG00000014226	sf3b4	60	97.083	ENSCAFG00000011617	SF3B4	57	97.083	Canis_familiaris
ENSSLDG00000014226	sf3b4	60	97.083	ENSCAFG00020019775	SF3B4	57	97.083	Canis_lupus_dingo
ENSSLDG00000014226	sf3b4	60	97.083	ENSCHIG00000025663	-	57	97.083	Capra_hircus
ENSSLDG00000014226	sf3b4	60	97.083	ENSTSYG00000009295	SF3B4	57	97.083	Carlito_syrichta
ENSSLDG00000014226	sf3b4	60	97.083	ENSCPOG00000008267	SF3B4	57	97.083	Cavia_porcellus
ENSSLDG00000014226	sf3b4	60	96.250	ENSCCAG00000021751	-	54	96.250	Cebus_capucinus
ENSSLDG00000014226	sf3b4	60	97.083	ENSCATG00000033114	SF3B4	57	97.083	Cercocebus_atys
ENSSLDG00000014226	sf3b4	60	97.083	ENSCLAG00000015851	SF3B4	57	97.083	Chinchilla_lanigera
ENSSLDG00000014226	sf3b4	60	97.083	ENSCSAG00000018129	SF3B4	57	97.083	Chlorocebus_sabaeus
ENSSLDG00000014226	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	55	98.261	Chrysemys_picta_bellii
ENSSLDG00000014226	sf3b4	56	88.393	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSSLDG00000014226	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSSLDG00000014226	sf3b4	60	97.083	ENSCANG00000035579	SF3B4	57	97.083	Colobus_angolensis_palliatus
ENSSLDG00000014226	sf3b4	60	97.083	ENSCGRG00001003590	Sf3b4	57	97.083	Cricetulus_griseus_chok1gshd
ENSSLDG00000014226	sf3b4	60	97.083	ENSCGRG00000016914	Sf3b4	57	97.083	Cricetulus_griseus_crigri
ENSSLDG00000014226	sf3b4	100	89.512	ENSCSEG00000015258	sf3b4	56	97.026	Cynoglossus_semilaevis
ENSSLDG00000014226	sf3b4	66	95.865	ENSCVAG00000005536	sf3b4	68	94.361	Cyprinodon_variegatus
ENSSLDG00000014226	sf3b4	60	97.917	ENSDARG00000018574	sf3b4	66	96.591	Danio_rerio
ENSSLDG00000014226	sf3b4	58	91.810	ENSDNOG00000048908	-	56	91.810	Dasypus_novemcinctus
ENSSLDG00000014226	sf3b4	97	65.750	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSSLDG00000014226	sf3b4	60	97.083	ENSDORG00000016366	Sf3b4	57	97.083	Dipodomys_ordii
ENSSLDG00000014226	sf3b4	57	88.158	ENSETEG00000008963	SF3B4	54	87.826	Echinops_telfairi
ENSSLDG00000014226	sf3b4	60	97.083	ENSEASG00005001477	SF3B4	57	97.083	Equus_asinus_asinus
ENSSLDG00000014226	sf3b4	60	97.083	ENSECAG00000024737	SF3B4	57	97.083	Equus_caballus
ENSSLDG00000014226	sf3b4	87	92.877	ENSELUG00000012876	sf3b4	66	98.485	Esox_lucius
ENSSLDG00000014226	sf3b4	60	97.083	ENSFCAG00000010106	SF3B4	57	97.083	Felis_catus
ENSSLDG00000014226	sf3b4	60	97.083	ENSFDAG00000009286	SF3B4	57	97.083	Fukomys_damarensis
ENSSLDG00000014226	sf3b4	76	79.479	ENSGMOG00000002519	sf3b4	67	97.826	Gadus_morhua
ENSSLDG00000014226	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	55	98.696	Gallus_gallus
ENSSLDG00000014226	sf3b4	66	96.617	ENSGAFG00000010181	sf3b4	68	96.617	Gambusia_affinis
ENSSLDG00000014226	sf3b4	59	99.153	ENSGACG00000003819	sf3b4	66	96.183	Gasterosteus_aculeatus
ENSSLDG00000014226	sf3b4	94	62.371	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSSLDG00000014226	sf3b4	60	97.083	ENSGGOG00000004761	SF3B4	57	97.083	Gorilla_gorilla
ENSSLDG00000014226	sf3b4	66	95.865	ENSHBUG00000002028	sf3b4	66	95.865	Haplochromis_burtoni
ENSSLDG00000014226	sf3b4	60	97.083	ENSHGLG00000012360	SF3B4	57	97.083	Heterocephalus_glaber_female
ENSSLDG00000014226	sf3b4	60	97.083	ENSHGLG00100008533	SF3B4	57	97.083	Heterocephalus_glaber_male
ENSSLDG00000014226	sf3b4	99	85.396	ENSHCOG00000003014	sf3b4	57	96.943	Hippocampus_comes
ENSSLDG00000014226	sf3b4	60	98.333	ENSIPUG00000012242	Sf3b4	66	96.970	Ictalurus_punctatus
ENSSLDG00000014226	sf3b4	60	97.083	ENSSTOG00000000684	-	57	97.083	Ictidomys_tridecemlineatus
ENSSLDG00000014226	sf3b4	59	71.622	ENSJJAG00000022500	Sf3b4	59	72.109	Jaculus_jaculus
ENSSLDG00000014226	sf3b4	94	90.526	ENSKMAG00000008154	sf3b4	67	96.970	Kryptolebias_marmoratus
ENSSLDG00000014226	sf3b4	100	96.030	ENSLBEG00000026818	sf3b4	100	96.030	Labrus_bergylta
ENSSLDG00000014226	sf3b4	60	95.417	ENSLACG00000004436	SF3B4	73	92.830	Latimeria_chalumnae
ENSSLDG00000014226	sf3b4	58	99.138	ENSLOCG00000009048	sf3b4	55	99.565	Lepisosteus_oculatus
ENSSLDG00000014226	sf3b4	76	79.630	ENSLAFG00000008531	SF3B4	56	97.083	Loxodonta_africana
ENSSLDG00000014226	sf3b4	89	61.475	ENSMFAG00000039067	-	58	79.263	Macaca_fascicularis
ENSSLDG00000014226	sf3b4	60	97.083	ENSMFAG00000042395	SF3B4	57	97.083	Macaca_fascicularis
ENSSLDG00000014226	sf3b4	60	97.083	ENSMMUG00000007256	SF3B4	57	97.083	Macaca_mulatta
ENSSLDG00000014226	sf3b4	60	97.083	ENSMNEG00000031839	SF3B4	57	97.083	Macaca_nemestrina
ENSSLDG00000014226	sf3b4	89	60.929	ENSMNEG00000031526	-	58	78.802	Macaca_nemestrina
ENSSLDG00000014226	sf3b4	60	97.083	ENSMLEG00000038667	SF3B4	57	97.083	Mandrillus_leucophaeus
ENSSLDG00000014226	sf3b4	72	95.876	ENSMAMG00000014692	sf3b4	73	95.876	Mastacembelus_armatus
ENSSLDG00000014226	sf3b4	66	95.865	ENSMZEG00005026741	sf3b4	66	95.865	Maylandia_zebra
ENSSLDG00000014226	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	55	98.696	Meleagris_gallopavo
ENSSLDG00000014226	sf3b4	60	97.083	ENSMAUG00000015266	Sf3b4	57	97.083	Mesocricetus_auratus
ENSSLDG00000014226	sf3b4	60	97.083	ENSMICG00000044961	SF3B4	57	97.083	Microcebus_murinus
ENSSLDG00000014226	sf3b4	92	70.051	ENSMOCG00000014155	-	57	94.805	Microtus_ochrogaster
ENSSLDG00000014226	sf3b4	60	97.083	ENSMOCG00000013658	-	57	97.083	Microtus_ochrogaster
ENSSLDG00000014226	sf3b4	59	99.153	ENSMMOG00000018032	sf3b4	67	96.970	Mola_mola
ENSSLDG00000014226	sf3b4	60	97.083	ENSMODG00000018767	SF3B4	57	97.083	Monodelphis_domestica
ENSSLDG00000014226	sf3b4	81	94.207	ENSMALG00000006174	sf3b4	82	94.207	Monopterus_albus
ENSSLDG00000014226	sf3b4	60	97.083	MGP_CAROLIEiJ_G0025365	Sf3b4	57	97.083	Mus_caroli
ENSSLDG00000014226	sf3b4	60	97.083	ENSMUSG00000068856	Sf3b4	57	97.083	Mus_musculus
ENSSLDG00000014226	sf3b4	60	97.083	MGP_PahariEiJ_G0026809	Sf3b4	57	97.083	Mus_pahari
ENSSLDG00000014226	sf3b4	60	97.083	MGP_SPRETEiJ_G0026309	Sf3b4	57	97.083	Mus_spretus
ENSSLDG00000014226	sf3b4	60	97.083	ENSMPUG00000005563	SF3B4	57	97.083	Mustela_putorius_furo
ENSSLDG00000014226	sf3b4	60	97.500	ENSMLUG00000010789	SF3B4	57	97.500	Myotis_lucifugus
ENSSLDG00000014226	sf3b4	76	81.818	ENSNGAG00000016337	Sf3b4	57	97.083	Nannospalax_galili
ENSSLDG00000014226	sf3b4	66	96.617	ENSNBRG00000013865	sf3b4	66	96.617	Neolamprologus_brichardi
ENSSLDG00000014226	sf3b4	96	66.416	ENSNLEG00000000537	-	58	88.261	Nomascus_leucogenys
ENSSLDG00000014226	sf3b4	57	93.860	ENSOPRG00000010808	SF3B4	54	93.478	Ochotona_princeps
ENSSLDG00000014226	sf3b4	91	57.937	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSSLDG00000014226	sf3b4	75	68.868	ENSODEG00000003597	-	59	80.913	Octodon_degus
ENSSLDG00000014226	sf3b4	66	95.489	ENSONIG00000002730	sf3b4	66	95.489	Oreochromis_niloticus
ENSSLDG00000014226	sf3b4	60	97.083	ENSOCUG00000004614	SF3B4	57	97.083	Oryctolagus_cuniculus
ENSSLDG00000014226	sf3b4	86	89.174	ENSORLG00000003062	sf3b4	59	99.127	Oryzias_latipes
ENSSLDG00000014226	sf3b4	74	90.728	ENSORLG00020000687	sf3b4	58	98.696	Oryzias_latipes_hni
ENSSLDG00000014226	sf3b4	74	90.728	ENSORLG00015010989	sf3b4	58	98.696	Oryzias_latipes_hsok
ENSSLDG00000014226	sf3b4	58	98.276	ENSOMEG00000013694	sf3b4	68	93.309	Oryzias_melastigma
ENSSLDG00000014226	sf3b4	60	97.083	ENSOGAG00000006265	SF3B4	57	97.083	Otolemur_garnettii
ENSSLDG00000014226	sf3b4	71	71.959	ENSOARG00000007368	-	55	81.416	Ovis_aries
ENSSLDG00000014226	sf3b4	60	97.083	ENSOARG00000020718	-	57	97.083	Ovis_aries
ENSSLDG00000014226	sf3b4	76	76.433	ENSPPAG00000030024	-	59	87.083	Pan_paniscus
ENSSLDG00000014226	sf3b4	60	97.083	ENSPPAG00000040904	SF3B4	57	97.083	Pan_paniscus
ENSSLDG00000014226	sf3b4	60	97.083	ENSPPRG00000007384	SF3B4	57	97.083	Panthera_pardus
ENSSLDG00000014226	sf3b4	60	97.083	ENSPTIG00000014530	SF3B4	57	97.083	Panthera_tigris_altaica
ENSSLDG00000014226	sf3b4	76	76.699	ENSPTRG00000049727	-	60	87.500	Pan_troglodytes
ENSSLDG00000014226	sf3b4	60	97.083	ENSPTRG00000001243	SF3B4	57	97.083	Pan_troglodytes
ENSSLDG00000014226	sf3b4	60	97.083	ENSPANG00000005126	SF3B4	57	97.083	Papio_anubis
ENSSLDG00000014226	sf3b4	70	96.454	ENSPKIG00000020669	sf3b4	77	96.207	Paramormyrops_kingsleyae
ENSSLDG00000014226	sf3b4	66	77.736	ENSPSIG00000009565	SF3B4	68	98.387	Pelodiscus_sinensis
ENSSLDG00000014226	sf3b4	60	97.083	ENSPEMG00000017568	Sf3b4	57	97.083	Peromyscus_maniculatus_bairdii
ENSSLDG00000014226	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSSLDG00000014226	sf3b4	60	97.083	ENSPCIG00000008765	SF3B4	57	97.083	Phascolarctos_cinereus
ENSSLDG00000014226	sf3b4	66	96.629	ENSPFOG00000005754	sf3b4	68	96.617	Poecilia_formosa
ENSSLDG00000014226	sf3b4	66	96.629	ENSPLAG00000001401	sf3b4	73	96.617	Poecilia_latipinna
ENSSLDG00000014226	sf3b4	66	96.629	ENSPREG00000011076	sf3b4	66	96.617	Poecilia_reticulata
ENSSLDG00000014226	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSSLDG00000014226	sf3b4	60	97.083	ENSPCOG00000015399	SF3B4	57	97.083	Propithecus_coquereli
ENSSLDG00000014226	sf3b4	60	97.083	ENSPVAG00000014171	SF3B4	57	97.083	Pteropus_vampyrus
ENSSLDG00000014226	sf3b4	66	95.865	ENSPNYG00000012700	sf3b4	66	95.865	Pundamilia_nyererei
ENSSLDG00000014226	sf3b4	60	97.917	ENSPNAG00000000686	sf3b4	67	96.970	Pygocentrus_nattereri
ENSSLDG00000014226	sf3b4	60	97.083	ENSRNOG00000021181	Sf3b4	57	97.083	Rattus_norvegicus
ENSSLDG00000014226	sf3b4	60	97.083	ENSRBIG00000043392	SF3B4	57	97.083	Rhinopithecus_bieti
ENSSLDG00000014226	sf3b4	92	59.221	ENSRROG00000028213	-	56	74.324	Rhinopithecus_roxellana
ENSSLDG00000014226	sf3b4	60	97.083	ENSRROG00000029366	SF3B4	57	97.083	Rhinopithecus_roxellana
ENSSLDG00000014226	sf3b4	60	96.667	ENSSBOG00000012310	-	57	96.667	Saimiri_boliviensis_boliviensis
ENSSLDG00000014226	sf3b4	60	92.500	ENSSHAG00000004043	SF3B4	56	92.500	Sarcophilus_harrisii
ENSSLDG00000014226	sf3b4	70	95.745	ENSSFOG00015008864	sf3b4	71	95.533	Scleropages_formosus
ENSSLDG00000014226	sf3b4	100	91.315	ENSSMAG00000006837	sf3b4	67	98.872	Scophthalmus_maximus
ENSSLDG00000014226	sf3b4	100	99.256	ENSSDUG00000012064	sf3b4	100	99.256	Seriola_dumerili
ENSSLDG00000014226	sf3b4	100	97.767	ENSSPAG00000019219	sf3b4	100	97.767	Stegastes_partitus
ENSSLDG00000014226	sf3b4	76	79.876	ENSSSCG00000006665	-	57	97.083	Sus_scrofa
ENSSLDG00000014226	sf3b4	59	97.034	ENSTGUG00000004470	SF3B4	90	98.690	Taeniopygia_guttata
ENSSLDG00000014226	sf3b4	79	90.596	ENSTRUG00000004516	sf3b4	67	94.737	Takifugu_rubripes
ENSSLDG00000014226	sf3b4	57	99.127	ENSTNIG00000009156	sf3b4	59	98.696	Tetraodon_nigroviridis
ENSSLDG00000014226	sf3b4	60	97.083	ENSTTRG00000005217	SF3B4	57	97.083	Tursiops_truncatus
ENSSLDG00000014226	sf3b4	60	97.083	ENSUAMG00000022468	SF3B4	57	97.083	Ursus_americanus
ENSSLDG00000014226	sf3b4	60	97.083	ENSUMAG00000003802	SF3B4	57	97.083	Ursus_maritimus
ENSSLDG00000014226	sf3b4	57	96.930	ENSVPAG00000008152	SF3B4	55	96.930	Vicugna_pacos
ENSSLDG00000014226	sf3b4	60	97.083	ENSVVUG00000007732	-	61	97.083	Vulpes_vulpes
ENSSLDG00000014226	sf3b4	76	82.295	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSSLDG00000014226	sf3b4	66	97.004	ENSXCOG00000019895	sf3b4	68	96.992	Xiphophorus_couchianus
ENSSLDG00000014226	sf3b4	66	96.992	ENSXMAG00000003772	sf3b4	68	96.992	Xiphophorus_maculatus