EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014433 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 14657 bases
Position: chrPEQF01099343.1:1797680-1812336
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000020502	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSSLDP00000021578	MMR_HSR1	PF01926.23	3.8e-05	1	1
ENSSLDP00000020083	MMR_HSR1	PF01926.23	4.1e-05	1	1
ENSSLDP00000019875	MMR_HSR1	PF01926.23	4.7e-05	1	1
ENSSLDP00000020458	MMR_HSR1	PF01926.23	5e-05	1	1
ENSSLDP00000020448	MMR_HSR1	PF01926.23	5.4e-05	1	1
ENSSLDP00000020552	MMR_HSR1	PF01926.23	5.7e-05	1	1
ENSSLDP00000020488	MMR_HSR1	PF01926.23	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000021136	-	1893	-	ENSSLDP00000020448	630 (aa)	-	-
ENSSLDT00000022015	-	1995	-	ENSSLDP00000021308	664 (aa)	-	-
ENSSLDT00000021146	-	1953	-	ENSSLDP00000020458	650 (aa)	-	-
ENSSLDT00000020753	-	1950	-	ENSSLDP00000020083	649 (aa)	-	-
ENSSLDT00000021244	-	1929	-	ENSSLDP00000020552	642 (aa)	-	-
ENSSLDT00000020543	-	1920	-	ENSSLDP00000019875	639 (aa)	-	-
ENSSLDT00000021176	-	1947	-	ENSSLDP00000020488	648 (aa)	-	-
ENSSLDT00000021191	-	1917	-	ENSSLDP00000020502	638 (aa)	-	-
ENSSLDT00000022000	-	2007	-	ENSSLDP00000021295	668 (aa)	-	-
ENSSLDT00000022289	-	1923	-	ENSSLDP00000021578	640 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000014433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014433	-	97	30.259	ENSSLDG00000006832	-	99	30.259
ENSSLDG00000014433	-	83	32.389	ENSSLDG00000014797	DNM1L	76	32.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014433	-	98	70.736	ENSAPOG00000009488	-	100	72.204	Acanthochromis_polyacanthus
ENSSLDG00000014433	-	99	73.659	ENSACIG00000004365	-	99	73.585	Amphilophus_citrinellus
ENSSLDG00000014433	-	62	82.188	ENSATEG00000018869	-	99	82.188	Anabas_testudineus
ENSSLDG00000014433	-	99	73.940	ENSACLG00000015278	-	99	74.138	Astatotilapia_calliptera
ENSSLDG00000014433	-	98	55.397	ENSCPBG00000012852	-	88	55.008	Chrysemys_picta_bellii
ENSSLDG00000014433	-	98	69.427	ENSCSEG00000005684	MX1	100	69.427	Cynoglossus_semilaevis
ENSSLDG00000014433	-	98	55.024	ENSGAGG00000009392	-	99	54.545	Gopherus_agassizii
ENSSLDG00000014433	-	90	72.021	ENSHBUG00000011119	-	96	73.145	Haplochromis_burtoni
ENSSLDG00000014433	-	98	57.440	ENSIPUG00000017075	-	99	57.440	Ictalurus_punctatus
ENSSLDG00000014433	-	98	61.465	ENSIPUG00000004815	-	100	60.539	Ictalurus_punctatus
ENSSLDG00000014433	-	97	58.266	ENSIPUG00000017098	-	99	58.266	Ictalurus_punctatus
ENSSLDG00000014433	-	98	67.091	ENSLOCG00000006389	MX1	100	67.091	Lepisosteus_oculatus
ENSSLDG00000014433	-	99	73.626	ENSMZEG00005012472	MX1	99	78.005	Maylandia_zebra
ENSSLDG00000014433	-	58	69.668	ENSODEG00000003389	-	98	69.668	Octodon_degus
ENSSLDG00000014433	-	99	74.138	ENSONIG00000020363	-	99	74.138	Oreochromis_niloticus
ENSSLDG00000014433	-	99	70.494	ENSOMEG00000008446	-	95	79.695	Oryzias_melastigma
ENSSLDG00000014433	-	90	72.539	ENSPNYG00000001452	-	94	74.322	Pundamilia_nyererei
ENSSLDG00000014433	-	61	78.718	ENSPNYG00000001309	MX1	97	78.718	Pundamilia_nyererei
ENSSLDG00000014433	-	98	67.727	ENSPNAG00000027889	-	99	67.727	Pygocentrus_nattereri
ENSSLDG00000014433	-	96	64.039	ENSSFOG00015011797	MX1	100	64.532	Scleropages_formosus
ENSSLDG00000014433	-	98	70.494	ENSSMAG00000010402	MX1	100	70.654	Scophthalmus_maximus
ENSSLDG00000014433	-	98	70.952	ENSXCOG00000010594	MX1	99	72.850	Xiphophorus_couchianus
ENSSLDG00000014433	-	99	72.684	ENSXMAG00000002020	MX1	99	72.684	Xiphophorus_maculatus