EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014436 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7700 bases
Position: chrPEQF01099017.1:525471-533170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	1	6
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	2	6
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	3	6
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	4	6
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	5	6
ENSSLDP00000018347	zf-C2H2	PF00096.26	3.2e-33	6	6
ENSSLDP00000018347	zf-met	PF12874.7	4.3e-13	1	2
ENSSLDP00000018347	zf-met	PF12874.7	4.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000018973	-	897	-	ENSSLDP00000018347	298 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000014436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014436	-	71	39.007	ENSSLDG00000018033	-	53	48.000
ENSSLDG00000014436	-	86	32.456	ENSSLDG00000003269	znf710b	54	32.456
ENSSLDG00000014436	-	97	39.394	ENSSLDG00000004485	-	64	39.181
ENSSLDG00000014436	-	70	46.835	ENSSLDG00000000202	-	66	46.835
ENSSLDG00000014436	-	75	37.857	ENSSLDG00000000203	-	95	39.362
ENSSLDG00000014436	-	75	35.714	ENSSLDG00000000432	-	91	36.000
ENSSLDG00000014436	-	71	40.426	ENSSLDG00000004756	-	90	40.323
ENSSLDG00000014436	-	72	38.129	ENSSLDG00000005868	-	87	36.076
ENSSLDG00000014436	-	72	38.129	ENSSLDG00000006217	-	85	37.179
ENSSLDG00000014436	-	71	34.450	ENSSLDG00000014177	zbtb47b	69	34.804
ENSSLDG00000014436	-	80	36.842	ENSSLDG00000018521	znf646	71	34.737
ENSSLDG00000014436	-	79	36.806	ENSSLDG00000009061	-	90	31.707
ENSSLDG00000014436	-	70	35.971	ENSSLDG00000012852	snai2	57	35.971
ENSSLDG00000014436	-	72	44.286	ENSSLDG00000017937	-	93	45.570
ENSSLDG00000014436	-	89	34.091	ENSSLDG00000000457	-	77	33.766
ENSSLDG00000014436	-	88	32.407	ENSSLDG00000011849	-	61	32.407
ENSSLDG00000014436	-	78	39.474	ENSSLDG00000012036	-	98	40.870
ENSSLDG00000014436	-	69	41.353	ENSSLDG00000004005	-	71	35.000
ENSSLDG00000014436	-	71	41.667	ENSSLDG00000004098	-	95	40.000
ENSSLDG00000014436	-	81	38.418	ENSSLDG00000016317	-	85	38.418
ENSSLDG00000014436	-	76	38.065	ENSSLDG00000006994	-	91	38.158
ENSSLDG00000014436	-	71	36.538	ENSSLDG00000005839	-	59	36.538
ENSSLDG00000014436	-	73	32.323	ENSSLDG00000013353	prdm5	73	32.323
ENSSLDG00000014436	-	76	33.772	ENSSLDG00000020432	-	86	38.732
ENSSLDG00000014436	-	74	33.333	ENSSLDG00000004428	PRDM15	51	32.778
ENSSLDG00000014436	-	70	41.000	ENSSLDG00000009582	-	95	41.000
ENSSLDG00000014436	-	76	30.939	ENSSLDG00000000464	-	57	31.443
ENSSLDG00000014436	-	80	36.283	ENSSLDG00000021278	-	60	38.323
ENSSLDG00000014436	-	71	35.849	ENSSLDG00000010390	-	78	41.071
ENSSLDG00000014436	-	80	34.466	ENSSLDG00000001860	-	92	38.889
ENSSLDG00000014436	-	71	43.590	ENSSLDG00000018598	-	88	43.590
ENSSLDG00000014436	-	73	35.000	ENSSLDG00000023060	-	74	35.000
ENSSLDG00000014436	-	80	36.420	ENSSLDG00000002515	-	82	36.420
ENSSLDG00000014436	-	77	38.073	ENSSLDG00000023661	-	84	38.073
ENSSLDG00000014436	-	81	37.327	ENSSLDG00000009821	-	79	37.327
ENSSLDG00000014436	-	81	38.624	ENSSLDG00000005850	-	93	39.459
ENSSLDG00000014436	-	71	41.860	ENSSLDG00000007568	-	93	41.860
ENSSLDG00000014436	-	73	35.915	ENSSLDG00000014166	znf319b	81	35.217
ENSSLDG00000014436	-	76	37.931	ENSSLDG00000013170	zbtb17	83	37.705
ENSSLDG00000014436	-	79	39.241	ENSSLDG00000012821	znf236	61	41.573
ENSSLDG00000014436	-	74	35.714	ENSSLDG00000013823	gfi1b	51	41.250
ENSSLDG00000014436	-	81	40.800	ENSSLDG00000006724	-	97	35.484
ENSSLDG00000014436	-	71	36.765	ENSSLDG00000018273	-	76	36.765
ENSSLDG00000014436	-	75	40.933	ENSSLDG00000007756	-	91	40.933
ENSSLDG00000014436	-	81	43.636	ENSSLDG00000001787	zbtb24	97	43.636
ENSSLDG00000014436	-	85	37.419	ENSSLDG00000025265	znf526	57	36.975
ENSSLDG00000014436	-	70	39.344	ENSSLDG00000020655	-	58	39.344
ENSSLDG00000014436	-	77	38.378	ENSSLDG00000018493	-	86	38.378
ENSSLDG00000014436	-	70	40.351	ENSSLDG00000020990	-	51	40.141
ENSSLDG00000014436	-	74	37.850	ENSSLDG00000000859	-	83	36.774
ENSSLDG00000014436	-	56	44.615	ENSSLDG00000015049	-	90	44.615
ENSSLDG00000014436	-	83	39.252	ENSSLDG00000006288	-	97	39.048
ENSSLDG00000014436	-	86	39.344	ENSSLDG00000012133	-	84	39.286
ENSSLDG00000014436	-	72	37.441	ENSSLDG00000001850	-	52	37.441
ENSSLDG00000014436	-	75	35.714	ENSSLDG00000017718	zbtb48	58	35.714
ENSSLDG00000014436	-	71	45.255	ENSSLDG00000002756	-	91	41.509
ENSSLDG00000014436	-	76	35.088	ENSSLDG00000005670	-	89	35.088
ENSSLDG00000014436	-	73	38.136	ENSSLDG00000017614	-	91	38.136
ENSSLDG00000014436	-	71	39.011	ENSSLDG00000000352	-	68	39.011
ENSSLDG00000014436	-	99	34.400	ENSSLDG00000020675	-	93	38.164
ENSSLDG00000014436	-	71	38.208	ENSSLDG00000008645	-	87	38.278
ENSSLDG00000014436	-	77	34.906	ENSSLDG00000016301	-	89	39.216
ENSSLDG00000014436	-	71	38.788	ENSSLDG00000012320	-	95	36.449
ENSSLDG00000014436	-	70	30.811	ENSSLDG00000015796	-	70	30.811
ENSSLDG00000014436	-	71	40.000	ENSSLDG00000010190	-	77	40.000
ENSSLDG00000014436	-	81	38.318	ENSSLDG00000000376	-	76	38.389
ENSSLDG00000014436	-	83	36.937	ENSSLDG00000013760	-	96	38.919
ENSSLDG00000014436	-	71	50.820	ENSSLDG00000020727	-	96	48.438
ENSSLDG00000014436	-	77	36.607	ENSSLDG00000007524	-	80	37.557
ENSSLDG00000014436	-	82	35.628	ENSSLDG00000024295	ZNF319	86	36.493
ENSSLDG00000014436	-	80	35.115	ENSSLDG00000015116	-	73	35.115
ENSSLDG00000014436	-	72	39.412	ENSSLDG00000002776	-	70	39.412
ENSSLDG00000014436	-	72	34.356	ENSSLDG00000025359	-	58	34.437
ENSSLDG00000014436	-	71	40.714	ENSSLDG00000020455	-	88	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014436	-	75	37.438	ENSAPOG00000019138	-	52	37.438	Acanthochromis_polyacanthus
ENSSLDG00000014436	-	72	32.870	ENSAPOG00000008319	-	72	32.870	Acanthochromis_polyacanthus
ENSSLDG00000014436	-	70	42.478	ENSACIG00000004641	-	65	42.478	Amphilophus_citrinellus
ENSSLDG00000014436	-	59	32.886	ENSACIG00000006826	-	57	32.886	Amphilophus_citrinellus
ENSSLDG00000014436	-	73	35.882	ENSACIG00000017892	-	73	35.882	Amphilophus_citrinellus
ENSSLDG00000014436	-	78	35.088	ENSAOCG00000016897	-	63	36.184	Amphiprion_ocellaris
ENSSLDG00000014436	-	69	32.836	ENSAOCG00000006744	-	78	32.836	Amphiprion_ocellaris
ENSSLDG00000014436	-	78	32.738	ENSAOCG00000001325	-	83	32.738	Amphiprion_ocellaris
ENSSLDG00000014436	-	70	32.407	ENSAOCG00000015944	-	67	32.407	Amphiprion_ocellaris
ENSSLDG00000014436	-	70	32.407	ENSAOCG00000014769	-	74	32.407	Amphiprion_ocellaris
ENSSLDG00000014436	-	79	35.088	ENSAPEG00000001556	-	63	36.184	Amphiprion_percula
ENSSLDG00000014436	-	71	36.667	ENSAPEG00000010013	-	62	33.333	Amphiprion_percula
ENSSLDG00000014436	-	81	35.366	ENSATEG00000018931	-	95	35.366	Anabas_testudineus
ENSSLDG00000014436	-	68	35.772	ENSACLG00000011658	-	75	35.772	Astatotilapia_calliptera
ENSSLDG00000014436	-	70	34.906	ENSAMXG00000029518	-	51	34.906	Astyanax_mexicanus
ENSSLDG00000014436	-	56	33.775	ENSCING00000002128	zf(c2h2)-35	64	34.259	Ciona_intestinalis
ENSSLDG00000014436	-	70	42.138	ENSCSEG00000010453	-	54	42.138	Cynoglossus_semilaevis
ENSSLDG00000014436	-	68	45.333	ENSCSEG00000015593	-	75	45.333	Cynoglossus_semilaevis
ENSSLDG00000014436	-	71	40.964	ENSCSEG00000010264	-	67	40.964	Cynoglossus_semilaevis
ENSSLDG00000014436	-	60	42.553	ENSCVAG00000020141	-	67	43.011	Cyprinodon_variegatus
ENSSLDG00000014436	-	78	40.559	ENSCVAG00000015616	-	75	40.559	Cyprinodon_variegatus
ENSSLDG00000014436	-	76	35.260	ENSCVAG00000003250	-	67	36.667	Cyprinodon_variegatus
ENSSLDG00000014436	-	72	37.113	ENSCVAG00000012682	-	67	37.113	Cyprinodon_variegatus
ENSSLDG00000014436	-	72	36.723	ENSCVAG00000006653	-	65	36.723	Cyprinodon_variegatus
ENSSLDG00000014436	-	80	36.628	ENSEBUG00000002290	-	53	37.423	Eptatretus_burgeri
ENSSLDG00000014436	-	78	38.182	ENSEBUG00000007931	-	74	38.182	Eptatretus_burgeri
ENSSLDG00000014436	-	73	45.122	ENSELUG00000024007	-	74	45.122	Esox_lucius
ENSSLDG00000014436	-	72	38.172	ENSELUG00000001909	-	83	35.833	Esox_lucius
ENSSLDG00000014436	-	81	39.506	ENSFHEG00000023184	-	51	39.506	Fundulus_heteroclitus
ENSSLDG00000014436	-	82	31.418	ENSGAFG00000008204	-	67	34.375	Gambusia_affinis
ENSSLDG00000014436	-	65	41.975	ENSGAFG00000007528	-	54	32.903	Gambusia_affinis
ENSSLDG00000014436	-	69	41.667	ENSGAFG00000001879	-	65	41.667	Gambusia_affinis
ENSSLDG00000014436	-	74	35.938	ENSHBUG00000006656	-	56	36.066	Haplochromis_burtoni
ENSSLDG00000014436	-	94	30.348	ENSHCOG00000008227	-	53	30.348	Hippocampus_comes
ENSSLDG00000014436	-	70	38.418	ENSHCOG00000008550	-	59	38.418	Hippocampus_comes
ENSSLDG00000014436	-	71	39.286	ENSHCOG00000015497	-	72	41.803	Hippocampus_comes
ENSSLDG00000014436	-	72	35.204	ENSHCOG00000013489	-	90	35.204	Hippocampus_comes
ENSSLDG00000014436	-	70	43.956	ENSHCOG00000020670	-	72	43.956	Hippocampus_comes
ENSSLDG00000014436	-	70	37.037	ENSHCOG00000019389	-	53	37.037	Hippocampus_comes
ENSSLDG00000014436	-	70	38.418	ENSHCOG00000001873	-	59	38.418	Hippocampus_comes
ENSSLDG00000014436	-	71	32.314	ENSKMAG00000007699	-	82	32.589	Kryptolebias_marmoratus
ENSSLDG00000014436	-	69	34.266	ENSLBEG00000006161	-	89	34.266	Labrus_bergylta
ENSSLDG00000014436	-	72	38.217	ENSLBEG00000007106	-	63	38.312	Labrus_bergylta
ENSSLDG00000014436	-	71	39.286	ENSLBEG00000011210	-	54	39.286	Labrus_bergylta
ENSSLDG00000014436	-	81	36.842	ENSLBEG00000001132	-	79	36.441	Labrus_bergylta
ENSSLDG00000014436	-	71	39.837	ENSLBEG00000017424	-	97	39.837	Labrus_bergylta
ENSSLDG00000014436	-	82	40.351	ENSLOCG00000004208	-	99	39.855	Lepisosteus_oculatus
ENSSLDG00000014436	-	92	36.522	ENSMAMG00000017939	-	83	36.522	Mastacembelus_armatus
ENSSLDG00000014436	-	73	34.031	ENSMZEG00005013907	-	86	33.846	Maylandia_zebra
ENSSLDG00000014436	-	54	39.080	ENSMMOG00000013330	-	50	39.080	Mola_mola
ENSSLDG00000014436	-	70	33.702	ENSMALG00000004279	-	81	33.702	Monopterus_albus
ENSSLDG00000014436	-	83	32.727	ENSONIG00000007967	-	72	32.870	Oreochromis_niloticus
ENSSLDG00000014436	-	80	34.568	ENSONIG00000005050	-	89	30.189	Oreochromis_niloticus
ENSSLDG00000014436	-	83	34.975	ENSORLG00000021885	-	64	33.696	Oryzias_latipes
ENSSLDG00000014436	-	98	37.186	ENSORLG00000002268	-	93	36.816	Oryzias_latipes
ENSSLDG00000014436	-	72	35.593	ENSORLG00020018921	-	67	35.593	Oryzias_latipes_hni
ENSSLDG00000014436	-	74	40.860	ENSORLG00015018099	-	63	40.860	Oryzias_latipes_hsok
ENSSLDG00000014436	-	74	33.898	ENSOMEG00000005578	-	80	33.898	Oryzias_melastigma
ENSSLDG00000014436	-	70	37.383	ENSPMGG00000002659	-	82	37.705	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	71	34.000	ENSPMGG00000009571	-	74	32.850	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	71	33.333	ENSPMGG00000007051	-	57	32.164	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	79	35.484	ENSPMGG00000006928	-	51	37.255	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	82	34.756	ENSPMGG00000002455	-	91	34.756	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	74	37.143	ENSPMGG00000002661	-	70	36.806	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	73	39.344	ENSPMGG00000019750	-	84	39.344	Periophthalmus_magnuspinnatus
ENSSLDG00000014436	-	70	45.238	ENSPMAG00000000839	-	84	45.238	Petromyzon_marinus
ENSSLDG00000014436	-	73	38.690	ENSPMAG00000004189	-	98	38.690	Petromyzon_marinus
ENSSLDG00000014436	-	72	35.714	ENSPMAG00000002022	-	100	35.714	Petromyzon_marinus
ENSSLDG00000014436	-	70	40.909	ENSPFOG00000009491	-	52	40.909	Poecilia_formosa
ENSSLDG00000014436	-	80	40.741	ENSPFOG00000018860	-	99	40.741	Poecilia_formosa
ENSSLDG00000014436	-	81	31.771	ENSPLAG00000014832	-	86	31.771	Poecilia_latipinna
ENSSLDG00000014436	-	81	31.405	ENSPLAG00000008941	-	88	35.676	Poecilia_latipinna
ENSSLDG00000014436	-	71	37.870	ENSPLAG00000010067	-	69	37.870	Poecilia_latipinna
ENSSLDG00000014436	-	70	31.401	ENSPMEG00000002953	-	52	31.401	Poecilia_mexicana
ENSSLDG00000014436	-	72	43.038	ENSPMEG00000024117	-	52	40.909	Poecilia_mexicana
ENSSLDG00000014436	-	85	30.918	ENSPMEG00000005210	-	83	31.937	Poecilia_mexicana
ENSSLDG00000014436	-	72	99.010	ENSPREG00000000808	-	52	98.958	Poecilia_reticulata
ENSSLDG00000014436	-	71	35.294	ENSPREG00000009488	-	93	35.294	Poecilia_reticulata
ENSSLDG00000014436	-	71	41.071	ENSPREG00000002603	-	60	38.053	Poecilia_reticulata
ENSSLDG00000014436	-	81	34.545	ENSPNAG00000005946	-	88	34.545	Pygocentrus_nattereri
ENSSLDG00000014436	-	71	47.059	ENSSFOG00015011531	-	80	47.059	Scleropages_formosus
ENSSLDG00000014436	-	86	36.792	ENSSMAG00000013291	-	90	39.881	Scophthalmus_maximus
ENSSLDG00000014436	-	73	32.609	ENSSMAG00000008308	-	69	31.532	Scophthalmus_maximus
ENSSLDG00000014436	-	70	46.835	ENSSMAG00000004259	-	56	46.835	Scophthalmus_maximus
ENSSLDG00000014436	-	71	33.333	ENSSPAG00000011544	-	57	33.333	Stegastes_partitus
ENSSLDG00000014436	-	71	36.449	ENSSPAG00000011533	-	81	36.709	Stegastes_partitus
ENSSLDG00000014436	-	79	35.762	ENSXETG00000012506	znf91	96	36.196	Xenopus_tropicalis
ENSSLDG00000014436	-	71	40.506	ENSXCOG00000000254	-	57	40.506	Xiphophorus_couchianus
ENSSLDG00000014436	-	71	35.625	ENSXCOG00000003441	-	60	36.364	Xiphophorus_couchianus
ENSSLDG00000014436	-	78	37.079	ENSXCOG00000020768	-	77	32.258	Xiphophorus_couchianus
ENSSLDG00000014436	-	70	30.827	ENSXMAG00000022657	-	63	30.806	Xiphophorus_maculatus