EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000014465 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3299 bases
Position: chrPEQF01099466.1:64524-67822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000018376	zf-C2H2	PF00096.26	1e-16	1	3
ENSSLDP00000018376	zf-C2H2	PF00096.26	1e-16	2	3
ENSSLDP00000018376	zf-C2H2	PF00096.26	1e-16	3	3
ENSSLDP00000018376	zf-met	PF12874.7	1.7e-11	1	2
ENSSLDP00000018376	zf-met	PF12874.7	1.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000019002	-	1317	-	ENSSLDP00000018376	438 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000014465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000014465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000014465	-	81	51.163	ENSSLDG00000004485	-	56	51.163
ENSSLDG00000014465	-	83	46.667	ENSSLDG00000018493	-	76	46.667
ENSSLDG00000014465	-	78	36.232	ENSSLDG00000006288	-	86	36.232
ENSSLDG00000014465	-	78	37.600	ENSSLDG00000016317	-	88	42.553
ENSSLDG00000014465	-	77	48.889	ENSSLDG00000012133	-	90	43.750
ENSSLDG00000014465	-	86	39.130	ENSSLDG00000006994	-	92	39.130
ENSSLDG00000014465	-	83	41.270	ENSSLDG00000021278	-	74	34.591
ENSSLDG00000014465	-	51	55.814	ENSSLDG00000001860	-	78	55.814
ENSSLDG00000014465	-	55	52.632	ENSSLDG00000000352	-	70	52.632
ENSSLDG00000014465	-	80	53.333	ENSSLDG00000023661	-	85	53.333
ENSSLDG00000014465	-	77	36.134	ENSSLDG00000010390	-	78	43.478
ENSSLDG00000014465	-	80	33.913	ENSSLDG00000015116	-	83	34.737
ENSSLDG00000014465	-	78	50.000	ENSSLDG00000013760	-	91	50.000
ENSSLDG00000014465	-	79	44.000	ENSSLDG00000025265	znf526	61	33.333
ENSSLDG00000014465	-	63	53.846	ENSSLDG00000002776	-	79	53.846
ENSSLDG00000014465	-	80	33.803	ENSSLDG00000016301	-	91	33.803
ENSSLDG00000014465	-	84	34.737	ENSSLDG00000014166	znf319b	77	34.737
ENSSLDG00000014465	-	83	48.936	ENSSLDG00000012821	znf236	75	36.364
ENSSLDG00000014465	-	78	32.203	ENSSLDG00000000376	-	74	32.000
ENSSLDG00000014465	-	78	32.704	ENSSLDG00000006724	-	89	34.848
ENSSLDG00000014465	-	78	53.191	ENSSLDG00000017937	-	94	42.857
ENSSLDG00000014465	-	77	52.273	ENSSLDG00000000859	-	76	60.526
ENSSLDG00000014465	-	78	51.220	ENSSLDG00000020675	-	93	45.652
ENSSLDG00000014465	-	77	46.667	ENSSLDG00000013353	prdm5	54	46.667
ENSSLDG00000014465	-	82	31.200	ENSSLDG00000000457	-	74	35.593
ENSSLDG00000014465	-	78	46.667	ENSSLDG00000012320	-	99	46.667
ENSSLDG00000014465	-	82	34.899	ENSSLDG00000007524	-	92	32.381
ENSSLDG00000014465	-	54	50.000	ENSSLDG00000009821	-	79	50.000
ENSSLDG00000014465	-	78	37.600	ENSSLDG00000008645	-	86	37.600
ENSSLDG00000014465	-	85	40.800	ENSSLDG00000020455	-	83	40.800
ENSSLDG00000014465	-	65	47.826	ENSSLDG00000021127	-	56	47.826
ENSSLDG00000014465	-	83	34.711	ENSSLDG00000005670	-	88	34.711
ENSSLDG00000014465	-	78	56.410	ENSSLDG00000005850	-	89	56.410
ENSSLDG00000014465	-	56	45.283	ENSSLDG00000007568	-	83	45.283
ENSSLDG00000014465	-	74	54.762	ENSSLDG00000005999	-	88	54.762
ENSSLDG00000014465	-	83	48.936	ENSSLDG00000007756	-	98	48.936
ENSSLDG00000014465	-	61	40.909	ENSSLDG00000001787	zbtb24	99	36.458
ENSSLDG00000014465	-	80	51.163	ENSSLDG00000020727	-	95	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000014465	-	87	72.340	ENSG00000103449	SALL1	62	72.340	Homo_sapiens
ENSSLDG00000014465	-	87	70.213	ENSAMEG00000006817	SALL1	54	70.213	Ailuropoda_melanoleuca
ENSSLDG00000014465	-	87	72.340	ENSANAG00000027238	SALL1	54	72.340	Aotus_nancymaae
ENSSLDG00000014465	-	84	67.010	ENSAMXG00000017702	sall1b	53	60.526	Astyanax_mexicanus
ENSSLDG00000014465	-	80	89.231	ENSAMXG00000018599	sall1a	53	77.108	Astyanax_mexicanus
ENSSLDG00000014465	-	87	72.340	ENSCJAG00000001740	SALL1	54	72.340	Callithrix_jacchus
ENSSLDG00000014465	-	87	72.340	ENSCAFG00000009755	SALL1	54	72.340	Canis_familiaris
ENSSLDG00000014465	-	87	72.340	ENSCAFG00020002842	SALL1	54	72.340	Canis_lupus_dingo
ENSSLDG00000014465	-	87	72.340	ENSTSYG00000029464	SALL1	54	72.340	Carlito_syrichta
ENSSLDG00000014465	-	87	72.340	ENSCPOG00000006564	SALL1	55	72.340	Cavia_porcellus
ENSSLDG00000014465	-	87	72.340	ENSCCAG00000001639	SALL1	54	72.340	Cebus_capucinus
ENSSLDG00000014465	-	87	72.340	ENSCATG00000004982	SALL1	54	72.340	Cercocebus_atys
ENSSLDG00000014465	-	87	72.340	ENSCLAG00000006380	SALL1	54	72.340	Chinchilla_lanigera
ENSSLDG00000014465	-	87	72.340	ENSCSAG00000005319	SALL1	54	72.340	Chlorocebus_sabaeus
ENSSLDG00000014465	-	87	72.340	ENSCANG00000036664	SALL1	58	72.340	Colobus_angolensis_palliatus
ENSSLDG00000014465	-	87	71.277	ENSCGRG00001023314	-	55	71.277	Cricetulus_griseus_chok1gshd
ENSSLDG00000014465	-	87	71.277	ENSCGRG00000009496	Sall1	57	71.277	Cricetulus_griseus_crigri
ENSSLDG00000014465	-	81	79.412	ENSDARG00000075891	sall1b	57	79.412	Danio_rerio
ENSSLDG00000014465	-	87	71.277	ENSETEG00000015150	SALL1	55	71.277	Echinops_telfairi
ENSSLDG00000014465	-	83	58.974	ENSEBUG00000008798	SALL1	59	58.333	Eptatretus_burgeri
ENSSLDG00000014465	-	87	73.404	ENSEASG00005014602	SALL1	54	73.404	Equus_asinus_asinus
ENSSLDG00000014465	-	84	80.723	ENSECAG00000011334	SALL1	60	80.723	Equus_caballus
ENSSLDG00000014465	-	84	80.723	ENSELUG00000017774	-	56	80.723	Esox_lucius
ENSSLDG00000014465	-	87	72.340	ENSFCAG00000024654	SALL1	62	72.340	Felis_catus
ENSSLDG00000014465	-	87	72.340	ENSGGOG00000000663	SALL1	54	72.340	Gorilla_gorilla
ENSSLDG00000014465	-	87	71.250	ENSIPUG00000022928	sall1b	59	71.250	Ictalurus_punctatus
ENSSLDG00000014465	-	87	72.340	ENSSTOG00000020885	SALL1	54	72.340	Ictidomys_tridecemlineatus
ENSSLDG00000014465	-	83	89.394	ENSLACG00000003556	SALL1	52	89.394	Latimeria_chalumnae
ENSSLDG00000014465	-	87	72.340	ENSMFAG00000003298	SALL1	54	72.340	Macaca_fascicularis
ENSSLDG00000014465	-	87	72.340	ENSMMUG00000017200	SALL1	58	72.340	Macaca_mulatta
ENSSLDG00000014465	-	87	72.340	ENSMNEG00000034770	SALL1	58	72.340	Macaca_nemestrina
ENSSLDG00000014465	-	87	72.340	ENSMLEG00000036406	SALL1	58	72.340	Mandrillus_leucophaeus
ENSSLDG00000014465	-	70	45.113	ENSMAMG00000015847	-	88	45.113	Mastacembelus_armatus
ENSSLDG00000014465	-	87	72.340	ENSMAUG00000019093	Sall1	54	72.340	Mesocricetus_auratus
ENSSLDG00000014465	-	87	71.277	ENSMICG00000036486	SALL1	54	71.277	Microcebus_murinus
ENSSLDG00000014465	-	80	88.235	ENSMMOG00000016400	sall1a	57	71.277	Mola_mola
ENSSLDG00000014465	-	87	72.340	ENSMPUG00000003265	SALL1	53	72.340	Mustela_putorius_furo
ENSSLDG00000014465	-	83	86.567	ENSMLUG00000015541	SALL1	53	86.567	Myotis_lucifugus
ENSSLDG00000014465	-	83	89.474	ENSNLEG00000001008	SALL1	55	89.474	Nomascus_leucogenys
ENSSLDG00000014465	-	87	72.340	ENSODEG00000003685	SALL1	54	72.340	Octodon_degus
ENSSLDG00000014465	-	80	88.235	ENSONIG00000002831	sall1a	60	71.277	Oreochromis_niloticus
ENSSLDG00000014465	-	80	88.235	ENSORLG00000013827	sall1a	63	88.235	Oryzias_latipes
ENSSLDG00000014465	-	86	69.792	ENSORLG00020020570	sall1a	57	69.792	Oryzias_latipes_hni
ENSSLDG00000014465	-	80	88.235	ENSORLG00015018830	sall1a	58	88.235	Oryzias_latipes_hsok
ENSSLDG00000014465	-	87	70.103	ENSOGAG00000027316	SALL1	54	70.103	Otolemur_garnettii
ENSSLDG00000014465	-	87	72.340	ENSPPAG00000035657	SALL1	55	72.340	Pan_paniscus
ENSSLDG00000014465	-	87	71.277	ENSPPRG00000023283	SALL1	62	71.277	Panthera_pardus
ENSSLDG00000014465	-	87	71.277	ENSPTIG00000013539	-	58	71.277	Panthera_tigris_altaica
ENSSLDG00000014465	-	87	72.340	ENSPANG00000024176	SALL1	54	72.340	Papio_anubis
ENSSLDG00000014465	-	83	80.000	ENSPKIG00000022251	sall1a	57	75.294	Paramormyrops_kingsleyae
ENSSLDG00000014465	-	87	72.340	ENSPPYG00000007345	SALL1	56	72.340	Pongo_abelii
ENSSLDG00000014465	-	87	70.213	ENSPVAG00000015374	SALL1	85	70.213	Pteropus_vampyrus
ENSSLDG00000014465	-	82	60.526	ENSPNAG00000007442	sall1b	51	58.974	Pygocentrus_nattereri
ENSSLDG00000014465	-	87	72.340	ENSRBIG00000015707	SALL1	58	72.340	Rhinopithecus_bieti
ENSSLDG00000014465	-	87	72.340	ENSRROG00000035777	SALL1	58	72.340	Rhinopithecus_roxellana
ENSSLDG00000014465	-	87	72.340	ENSSBOG00000032186	SALL1	56	72.340	Saimiri_boliviensis_boliviensis
ENSSLDG00000014465	-	83	89.062	ENSSFOG00015020020	sall1a	58	88.406	Scleropages_formosus
ENSSLDG00000014465	-	96	94.444	ENSSDUG00000000748	sall1b	77	87.742	Seriola_dumerili
ENSSLDG00000014465	-	87	72.340	ENSSSCG00000002836	SALL1	58	72.340	Sus_scrofa
ENSSLDG00000014465	-	80	86.765	ENSTRUG00000008950	sall1a	63	73.810	Takifugu_rubripes
ENSSLDG00000014465	-	83	86.765	ENSTNIG00000004257	sall1a	62	75.000	Tetraodon_nigroviridis
ENSSLDG00000014465	-	87	71.277	ENSUAMG00000023379	-	58	71.277	Ursus_americanus
ENSSLDG00000014465	-	87	72.340	ENSVVUG00000019383	-	58	72.340	Vulpes_vulpes
ENSSLDG00000014465	-	78	65.789	ENSXETG00000017176	sall2	59	65.789	Xenopus_tropicalis